RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 KCNJ18B7U540 433 aa8.92□□□□□ -0.98
PRKCB-208ENST00000487674 TIMM44O43615 452 aa8.92□□□□□ -0.98
PRKCB-208ENST00000487674 ZNF202O95125 648 aa8.92□□□□□ -0.98
PRKCB-208ENST00000487674 LATS1O95835 1130 aa8.92□□□□□ -0.98
PRKCB-208ENST00000487674 SETSIPP0DME0 302 aa8.92□□□□□ -0.98
PRKCB-208ENST00000487674 FECHP22830 423 aa8.92□□□□□ -0.98
PRKCB-208ENST00000487674 PRKCHP24723 683 aa8.92□□□□□ -0.98
PRKCB-208ENST00000487674 HOXD9P28356 352 aaPredicted RBP8.92□□□□□ -0.98
PRKCB-208ENST00000487674 HARS2P49590 506 aaKnown RBP8.92□□□□□ -0.98
PRKCB-208ENST00000487674 TPMTP51580 245 aa8.92□□□□□ -0.98
PRKCB-208ENST00000487674 COPAP53621 1224 aa8.92□□□□□ -0.98
PRKCB-208ENST00000487674 YWHAEP62258 255 aaKnown RBP8.92□□□□□ -0.98
PRKCB-208ENST00000487674 FAM193AP78312 1265 aa8.92□□□□□ -0.98
PRKCB-208ENST00000487674 ARID5AQ03989 594 aa8.92□□□□□ -0.98
PRKCB-208ENST00000487674 PDE4CQ08493 712 aa8.92□□□□□ -0.98
PRKCB-208ENST00000487674 ADIGQ0VDE8 80 aa8.92□□□□□ -0.98
PRKCB-208ENST00000487674 BST2Q10589 180 aaKnown RBP8.92□□□□□ -0.98
PRKCB-208ENST00000487674 CUL2Q13617 745 aa8.92□□□□□ -0.98
PRKCB-208ENST00000487674 TRIP4Q15650 581 aaPredicted RBP8.92□□□□□ -0.98
PRKCB-208ENST00000487674 CBWD6Q4V339 395 aa8.92□□□□□ -0.98
PRKCB-208ENST00000487674 MPPE1Q53F39 396 aa8.92□□□□□ -0.98
PRKCB-208ENST00000487674 SGO2Q562F6 1265 aa8.92□□□□□ -0.98
PRKCB-208ENST00000487674 DCAF17Q5H9S7 520 aaPredicted RBP8.92□□□□□ -0.98
PRKCB-208ENST00000487674 CBWD3Q5JTY5 395 aa8.92□□□□□ -0.98
PRKCB-208ENST00000487674 CBWD5Q5RIA9 395 aa8.92□□□□□ -0.98
PRKCB-208ENST00000487674 TCERG1LQ5VWI1 586 aa8.92□□□□□ -0.98
PRKCB-208ENST00000487674 SERPINA13PQ6UXR4 307 aa8.92□□□□□ -0.98
PRKCB-208ENST00000487674 BHLHA9Q7RTU4 235 aa8.92□□□□□ -0.98
PRKCB-208ENST00000487674 FMNL3Q8IVF7 1028 aa8.92□□□□□ -0.98
PRKCB-208ENST00000487674 NAXDQ8IW45 347 aa8.92□□□□□ -0.98
PRKCB-208ENST00000487674 ZC3H3Q8IXZ2 948 aaKnown RBP8.92□□□□□ -0.98
PRKCB-208ENST00000487674 SMYD4Q8IYR2 804 aaPredicted RBP8.92□□□□□ -0.98
PRKCB-208ENST00000487674 ZCCHC9Q8N567 271 aaKnown RBP8.92□□□□□ -0.98
PRKCB-208ENST00000487674 WFIKKN2Q8TEU8 576 aa8.92□□□□□ -0.98
PRKCB-208ENST00000487674 DDI1Q8WTU0 396 aa8.92□□□□□ -0.98
PRKCB-208ENST00000487674 RNF139Q8WU17 664 aa8.92□□□□□ -0.98
PRKCB-208ENST00000487674 SIPA1Q96FS4 1042 aa8.92□□□□□ -0.98
PRKCB-208ENST00000487674 EEF2KMTQ96G04 330 aa8.92□□□□□ -0.98
PRKCB-208ENST00000487674 IPO9Q96P70 1041 aaKnown RBP8.92□□□□□ -0.98
PRKCB-208ENST00000487674 TSG101Q99816 390 aa8.92□□□□□ -0.98
PRKCB-208ENST00000487674 GPR174Q9BXC1 333 aa8.92□□□□□ -0.98
PRKCB-208ENST00000487674 CIPCQ9C0C6 399 aa8.92□□□□□ -0.98
PRKCB-208ENST00000487674 PCED1AQ9H1Q7 454 aa8.92□□□□□ -0.98
PRKCB-208ENST00000487674 LRRC4Q9HBW1 653 aa8.92□□□□□ -0.98
PRKCB-208ENST00000487674 ITM2CQ9NQX7 267 aa8.92□□□□□ -0.98
PRKCB-208ENST00000487674 RMND1Q9NWS8 449 aa8.92□□□□□ -0.98
PRKCB-208ENST00000487674 HESX1Q9UBX0 185 aa8.92□□□□□ -0.98
PRKCB-208ENST00000487674 STOML2Q9UJZ1 356 aa8.92□□□□□ -0.98
PRKCB-208ENST00000487674 TSPAN16Q9UKR8 245 aa8.92□□□□□ -0.98
PRKCB-208ENST00000487674 CLEC4EQ9ULY5 219 aa8.92□□□□□ -0.98
PRKCB-208ENST00000487674 COQ4Q9Y3A0 265 aa8.92□□□□□ -0.98
PRKCB-208ENST00000487674 ASPMQ8IZT6 3477 aa8.91□□□□□ -0.98
PRKCB-208ENST00000487674 FAM221BA6H8Z2 402 aa8.91□□□□□ -0.98
PRKCB-208ENST00000487674 SRRM3A6NNA2 597 aaPredicted RBP8.91□□□□□ -0.98
PRKCB-208ENST00000487674 METTL12A8MUP2 240 aa8.91□□□□□ -0.98
PRKCB-208ENST00000487674 TULP2O00295 520 aa8.91□□□□□ -0.98
PRKCB-208ENST00000487674 O00370 1275 aa8.91□□□□□ -0.98
PRKCB-208ENST00000487674 SH3BP5O60239 455 aa8.91□□□□□ -0.98
PRKCB-208ENST00000487674 CER1O95813 267 aa8.91□□□□□ -0.98
PRKCB-208ENST00000487674 EPHX1P07099 455 aa8.91□□□□□ -0.98
PRKCB-208ENST00000487674 ZNF883P0CG24 379 aa8.91□□□□□ -0.98
PRKCB-208ENST00000487674 ACADMP11310 421 aa8.91□□□□□ -0.98
PRKCB-208ENST00000487674 CD19P15391 556 aa8.91□□□□□ -0.98
PRKCB-208ENST00000487674 TBXAS1P24557 533 aaPredicted RBP8.91□□□□□ -0.98
PRKCB-208ENST00000487674 MAOBP27338 520 aa8.91□□□□□ -0.98
PRKCB-208ENST00000487674 PNOCQ13519 176 aa8.91□□□□□ -0.98
PRKCB-208ENST00000487674 CAMK2GQ13555 558 aaPredicted RBP8.91□□□□□ -0.98
PRKCB-208ENST00000487674 COBLL1Q53SF7 1204 aa8.91□□□□□ -0.98
PRKCB-208ENST00000487674 DCAF12L1Q5VU92 463 aa8.91□□□□□ -0.98
PRKCB-208ENST00000487674 TMEM215Q68D42 235 aa8.91□□□□□ -0.98
PRKCB-208ENST00000487674 RAB44Q7Z6P3 723 aaPredicted RBP8.91□□□□□ -0.98
PRKCB-208ENST00000487674 CACUL1Q86Y37 369 aa8.91□□□□□ -0.98
PRKCB-208ENST00000487674 SIX6OS1Q8N1H7 587 aa8.91□□□□□ -0.98
PRKCB-208ENST00000487674 SCML4Q8N228 414 aa8.91□□□□□ -0.98
PRKCB-208ENST00000487674 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.91□□□□□ -0.98
PRKCB-208ENST00000487674 SORCS1Q8WY21 1168 aa8.91□□□□□ -0.98
PRKCB-208ENST00000487674 KCTD13Q8WZ19 329 aa8.91□□□□□ -0.98
PRKCB-208ENST00000487674 NUP58Q9BVL2 599 aa8.91□□□□□ -0.98
PRKCB-208ENST00000487674 MIR1-1HGQ9H1L0 117 aa8.91□□□□□ -0.98
PRKCB-208ENST00000487674 LHX5Q9H2C1 402 aa8.91□□□□□ -0.98
PRKCB-208ENST00000487674 FBRSQ9HAH7 460 aa8.91□□□□□ -0.98
PRKCB-208ENST00000487674 ADGRG1Q9Y653 693 aa8.91□□□□□ -0.98
PRKCB-208ENST00000487674 CACNA1GO43497 2377 aa8.91□□□□□ -0.98
PRKCB-208ENST00000487674 ZZEF1O43149 2961 aa8.9□□□□□ -0.98
PRKCB-208ENST00000487674 YJEFN3A6XGL0 299 aa8.9□□□□□ -0.98
PRKCB-208ENST00000487674 E7ENQ6 273 aa8.9□□□□□ -0.98
PRKCB-208ENST00000487674 BCAT2O15382 392 aaPredicted RBP8.9□□□□□ -0.98
PRKCB-208ENST00000487674 MSI1O43347 362 aaKnown RBP8.9□□□□□ -0.98
PRKCB-208ENST00000487674 FTH1P19P0C7X4 201 aa8.9□□□□□ -0.98
PRKCB-208ENST00000487674 VDRP11473 427 aa8.9□□□□□ -0.98
PRKCB-208ENST00000487674 HLA-FP30511 346 aa8.9□□□□□ -0.98
PRKCB-208ENST00000487674 PRCPP42785 496 aa8.9□□□□□ -0.98
PRKCB-208ENST00000487674 FKBP3Q00688 224 aaKnown RBP8.9□□□□□ -0.98
PRKCB-208ENST00000487674 LRRC63Q05C16 580 aa8.9□□□□□ -0.98
PRKCB-208ENST00000487674 TRIP6Q15654 476 aaKnown RBP8.9□□□□□ -0.98
PRKCB-208ENST00000487674 PKDCCQ504Y2 493 aa8.9□□□□□ -0.98
PRKCB-208ENST00000487674 FNDC3BQ53EP0 1204 aaKnown RBP8.9□□□□□ -0.98
PRKCB-208ENST00000487674 ADGRF1Q5T601 910 aa8.9□□□□□ -0.98
PRKCB-208ENST00000487674 ZNF658Q5TYW1 1059 aaPredicted RBP8.9□□□□□ -0.98
PRKCB-208ENST00000487674 BSPRYQ5W0U4 402 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms