RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 KIF19Q2TAC6 998 aa11.61□□□□□ -0.55
SMPD4-218ENST00000482171 DEFB115Q30KQ5 88 aa11.61□□□□□ -0.55
SMPD4-218ENST00000482171 LACTB2Q53H82 288 aaPredicted RBP11.61□□□□□ -0.55
SMPD4-218ENST00000482171 NAPEPLDQ6IQ20 393 aa11.61□□□□□ -0.55
SMPD4-218ENST00000482171 ZNF280DQ6N043 979 aa11.61□□□□□ -0.55
SMPD4-218ENST00000482171 GIPC2Q8TF65 315 aa11.61□□□□□ -0.55
SMPD4-218ENST00000482171 TBCBQ99426 244 aa11.61□□□□□ -0.55
SMPD4-218ENST00000482171 TKTL2Q9H0I9 626 aa11.61□□□□□ -0.55
SMPD4-218ENST00000482171 DMAP1Q9NPF5 467 aaPredicted RBP11.61□□□□□ -0.55
SMPD4-218ENST00000482171 NDFIP2Q9NV92 336 aa11.61□□□□□ -0.55
SMPD4-218ENST00000482171 ARHGEF38Q9NXL2 777 aa11.61□□□□□ -0.55
SMPD4-218ENST00000482171 FOXO6A8MYZ6 492 aa11.61□□□□□ -0.55
SMPD4-218ENST00000482171 FSCN2O14926 492 aa11.61□□□□□ -0.55
SMPD4-218ENST00000482171 LIASO43766 372 aa11.61□□□□□ -0.55
SMPD4-218ENST00000482171 MGRN1O60291 552 aa11.61□□□□□ -0.55
SMPD4-218ENST00000482171 SPAG6O75602 509 aa11.61□□□□□ -0.55
SMPD4-218ENST00000482171 NUDT17P0C025 328 aa11.61□□□□□ -0.55
SMPD4-218ENST00000482171 SPRP35270 261 aaPredicted RBP11.61□□□□□ -0.55
SMPD4-218ENST00000482171 GLRBP48167 497 aa11.61□□□□□ -0.55
SMPD4-218ENST00000482171 ZBTB17Q13105 803 aa11.61□□□□□ -0.55
SMPD4-218ENST00000482171 PTK6Q13882 451 aa11.61□□□□□ -0.55
SMPD4-218ENST00000482171 IYDQ6PHW0 289 aa11.61□□□□□ -0.55
SMPD4-218ENST00000482171 HAUS8Q9BT25 410 aa11.61□□□□□ -0.55
SMPD4-218ENST00000482171 PCYOX1Q9UHG3 505 aa11.61□□□□□ -0.55
SMPD4-218ENST00000482171 SDR42E2A6NKP2 422 aa11.61□□□□□ -0.55
SMPD4-218ENST00000482171 RNF103O00237 685 aa11.61□□□□□ -0.55
SMPD4-218ENST00000482171 PYGBP11216 843 aa11.61□□□□□ -0.55
SMPD4-218ENST00000482171 RPL22P35268 128 aaKnown RBP11.61□□□□□ -0.55
SMPD4-218ENST00000482171 ROR2Q01974 943 aaKnown RBP11.61□□□□□ -0.55
SMPD4-218ENST00000482171 POU6F1Q14863 301 aa11.61□□□□□ -0.55
SMPD4-218ENST00000482171 TTC39BQ5VTQ0 682 aaPredicted RBP11.61□□□□□ -0.55
SMPD4-218ENST00000482171 C9orf57Q5W0N0 161 aa11.61□□□□□ -0.55
SMPD4-218ENST00000482171 UNC93AQ86WB7 457 aa11.61□□□□□ -0.55
SMPD4-218ENST00000482171 GPR152Q8TDT2 470 aa11.61□□□□□ -0.55
SMPD4-218ENST00000482171 HTR3CQ8WXA8 447 aa11.61□□□□□ -0.55
SMPD4-218ENST00000482171 EME1Q96AY2 570 aa11.61□□□□□ -0.55
SMPD4-218ENST00000482171 SENP6Q9GZR1 1112 aaPredicted RBP11.61□□□□□ -0.55
SMPD4-218ENST00000482171 RBM22Q9NW64 420 aaKnown RBP eCLIP11.61□□□□□ -0.55
SMPD4-218ENST00000482171 CHCHD3Q9NX63 227 aaKnown RBP11.61□□□□□ -0.55
SMPD4-218ENST00000482171 RGS17Q9UGC6 210 aaPredicted RBP11.61□□□□□ -0.55
SMPD4-218ENST00000482171 HMGXB4Q9UGU5 601 aa11.61□□□□□ -0.55
SMPD4-218ENST00000482171 COQ4Q9Y3A0 265 aa11.61□□□□□ -0.55
SMPD4-218ENST00000482171 hCG_1818297A0A087WSY0 165 aa11.6□□□□□ -0.55
SMPD4-218ENST00000482171 DPYSL4O14531 572 aa11.6□□□□□ -0.55
SMPD4-218ENST00000482171 AHCYL1O43865 530 aa11.6□□□□□ -0.55
SMPD4-218ENST00000482171 CKMP06732 381 aa11.6□□□□□ -0.55
SMPD4-218ENST00000482171 BGNP21810 368 aa11.6□□□□□ -0.55
SMPD4-218ENST00000482171 DPYSL3Q14195 570 aa11.6□□□□□ -0.55
SMPD4-218ENST00000482171 FRA10AC1Q70Z53 315 aa11.6□□□□□ -0.55
SMPD4-218ENST00000482171 ANKRD52Q8NB46 1076 aa11.6□□□□□ -0.55
SMPD4-218ENST00000482171 CRYGNQ8WXF5 182 aa11.6□□□□□ -0.55
SMPD4-218ENST00000482171 CNBD2Q96M20 576 aa11.6□□□□□ -0.55
SMPD4-218ENST00000482171 BTBD10Q9BSF8 475 aa11.6□□□□□ -0.55
SMPD4-218ENST00000482171 TMEM106CQ9BVX2 250 aa11.6□□□□□ -0.55
SMPD4-218ENST00000482171 POPDC2Q9HBU9 364 aa11.6□□□□□ -0.55
SMPD4-218ENST00000482171 NT5MQ9NPB1 228 aa11.6□□□□□ -0.55
SMPD4-218ENST00000482171 CACNA1SQ13698 1873 aa11.6□□□□□ -0.55
SMPD4-218ENST00000482171 C10orf71Q711Q0 1435 aa11.6□□□□□ -0.55
SMPD4-218ENST00000482171 SMAPO00193 183 aa11.6□□□□□ -0.55
SMPD4-218ENST00000482171 SPTLC1O15269 473 aa11.6□□□□□ -0.55
SMPD4-218ENST00000482171 TRUB2O95900 331 aaKnown RBP11.6□□□□□ -0.55
SMPD4-218ENST00000482171 ASGR1P07306 291 aa11.6□□□□□ -0.55
SMPD4-218ENST00000482171 ADRA1DP25100 572 aa11.6□□□□□ -0.55
SMPD4-218ENST00000482171 FDFT1P37268 417 aa11.6□□□□□ -0.55
SMPD4-218ENST00000482171 ACAD11Q709F0 780 aa11.6□□□□□ -0.55
SMPD4-218ENST00000482171 MON1BQ7L1V2 547 aa11.6□□□□□ -0.55
SMPD4-218ENST00000482171 GANCQ8TET4 914 aa11.6□□□□□ -0.55
SMPD4-218ENST00000482171 SDCCAG3Q96C92 435 aa11.6□□□□□ -0.55
SMPD4-218ENST00000482171 FZD8Q9H461 694 aa11.6□□□□□ -0.55
SMPD4-218ENST00000482171 LRRC19Q9H756 370 aa11.6□□□□□ -0.55
SMPD4-218ENST00000482171 DDX18Q9NVP1 670 aaKnown RBP11.6□□□□□ -0.55
SMPD4-218ENST00000482171 WDR70Q9NW82 654 aa11.6□□□□□ -0.55
SMPD4-218ENST00000482171 HACD3Q9P035 362 aa11.6□□□□□ -0.55
SMPD4-218ENST00000482171 SMIM35A0A1B0GVV1 85 aa11.6□□□□□ -0.55
SMPD4-218ENST00000482171 CILPO75339 1184 aa11.6□□□□□ -0.55
SMPD4-218ENST00000482171 DGKIO75912 1065 aa11.6□□□□□ -0.55
SMPD4-218ENST00000482171 KRT36O76013 467 aa11.6□□□□□ -0.55
SMPD4-218ENST00000482171 GFAPP14136 432 aa11.6□□□□□ -0.55
SMPD4-218ENST00000482171 GOT1P17174 413 aa11.6□□□□□ -0.55
SMPD4-218ENST00000482171 SERPINB9P50453 376 aa11.6□□□□□ -0.55
SMPD4-218ENST00000482171 RAB27AP51159 221 aa11.6□□□□□ -0.55
SMPD4-218ENST00000482171 PLEKHA7Q6IQ23 1121 aa11.6□□□□□ -0.55
SMPD4-218ENST00000482171 PMF1Q6P1K2 205 aa11.6□□□□□ -0.55
SMPD4-218ENST00000482171 TTC27Q6P3X3 843 aa11.6□□□□□ -0.55
SMPD4-218ENST00000482171 ATP6V0D2Q8N8Y2 350 aa11.6□□□□□ -0.55
SMPD4-218ENST00000482171 NPLOC4Q8TAT6 608 aa11.6□□□□□ -0.55
SMPD4-218ENST00000482171 TCP10LQ8TDR4 215 aa11.6□□□□□ -0.55
SMPD4-218ENST00000482171 DPEP3Q9H4B8 488 aa11.6□□□□□ -0.55
SMPD4-218ENST00000482171 DSEQ9UL01 958 aa11.6□□□□□ -0.55
SMPD4-218ENST00000482171 VANGL2Q9ULK5 521 aa11.6□□□□□ -0.55
SMPD4-218ENST00000482171 SLC8A2Q9UPR5 921 aa11.6□□□□□ -0.55
SMPD4-218ENST00000482171 TTC36A6NLP5 189 aa11.6□□□□□ -0.55
SMPD4-218ENST00000482171 MTSS1O43312 755 aa11.6□□□□□ -0.55
SMPD4-218ENST00000482171 SNX2O60749 519 aa11.6□□□□□ -0.55
SMPD4-218ENST00000482171 ZBTB48P10074 688 aaPredicted RBP11.6□□□□□ -0.55
SMPD4-218ENST00000482171 MGAT1P26572 445 aa11.6□□□□□ -0.55
SMPD4-218ENST00000482171 CCR1P32246 355 aa11.6□□□□□ -0.55
SMPD4-218ENST00000482171 UNC45BQ8IWX7 931 aa11.6□□□□□ -0.55
SMPD4-218ENST00000482171 FITM2Q8N6M3 262 aa11.6□□□□□ -0.55
SMPD4-218ENST00000482171 MAGEC3Q8TD91 643 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms