RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 SRRTQ9BXP5 876 aaKnown RBP13.83□□□□□ -0.2
CPSF4-210ENST00000469897 TMEM245Q9H330 911 aa13.83□□□□□ -0.2
CPSF4-210ENST00000469897 DNAAF2Q9NVR5 837 aaKnown RBP13.83□□□□□ -0.2
CPSF4-210ENST00000469897 STIM2Q9P246 746 aa13.83□□□□□ -0.2
CPSF4-210ENST00000469897 GGA2Q9UJY4 613 aa13.83□□□□□ -0.2
CPSF4-210ENST00000469897 A0A1B0GTW7 788 aa13.82□□□□□ -0.2
CPSF4-210ENST00000469897 P4HA2O15460 535 aa13.82□□□□□ -0.2
CPSF4-210ENST00000469897 ACSL4O60488 711 aa13.82□□□□□ -0.2
CPSF4-210ENST00000469897 GADD45BO75293 160 aaPredicted RBP13.82□□□□□ -0.2
CPSF4-210ENST00000469897 LATS1O95835 1130 aa13.82□□□□□ -0.2
CPSF4-210ENST00000469897 LTFP02788 710 aa13.82□□□□□ -0.2
CPSF4-210ENST00000469897 FYNP06241 537 aa13.82□□□□□ -0.2
CPSF4-210ENST00000469897 PABPC1P11940 636 aaKnown RBP13.82□□□□□ -0.2
CPSF4-210ENST00000469897 SLC6A4P31645 630 aa13.82□□□□□ -0.2
CPSF4-210ENST00000469897 CD70P32970 193 aa13.82□□□□□ -0.2
CPSF4-210ENST00000469897 PPP1R2P41236 205 aa13.82□□□□□ -0.2
CPSF4-210ENST00000469897 SLC11A2P49281 568 aa13.82□□□□□ -0.2
CPSF4-210ENST00000469897 ZNF445P59923 1031 aa13.82□□□□□ -0.2
CPSF4-210ENST00000469897 CAMK2GQ13555 558 aaPredicted RBP13.82□□□□□ -0.2
CPSF4-210ENST00000469897 MORC3Q14149 939 aa13.82□□□□□ -0.2
CPSF4-210ENST00000469897 STILQ15468 1287 aa13.82□□□□□ -0.2
CPSF4-210ENST00000469897 PTPRNQ16849 979 aa13.82□□□□□ -0.2
CPSF4-210ENST00000469897 MBLAC2Q68D91 279 aa13.82□□□□□ -0.2
CPSF4-210ENST00000469897 MSANTD2Q6P1R3 559 aa13.82□□□□□ -0.2
CPSF4-210ENST00000469897 ZCCHC9Q8N567 271 aaKnown RBP13.82□□□□□ -0.2
CPSF4-210ENST00000469897 OR2T3Q8NH03 318 aa13.82□□□□□ -0.2
CPSF4-210ENST00000469897 WFDC5Q8TCV5 224 aa13.82□□□□□ -0.2
CPSF4-210ENST00000469897 WFIKKN2Q8TEU8 576 aa13.82□□□□□ -0.2
CPSF4-210ENST00000469897 GOLGA1Q92805 767 aa13.82□□□□□ -0.2
CPSF4-210ENST00000469897 ADAM33Q9BZ11 813 aa13.82□□□□□ -0.2
CPSF4-210ENST00000469897 EIF2B4Q9UI10 523 aaKnown RBP13.82□□□□□ -0.2
CPSF4-210ENST00000469897 ZMIZ1Q9ULJ6 1067 aa13.82□□□□□ -0.2
CPSF4-210ENST00000469897 NAALADL1Q9UQQ1 740 aa13.82□□□□□ -0.2
CPSF4-210ENST00000469897 KIAA1549LQ6ZVL6 1849 aa13.81□□□□□ -0.2
CPSF4-210ENST00000469897 MYO16Q9Y6X6 1858 aa13.81□□□□□ -0.2
CPSF4-210ENST00000469897 GJB3O75712 270 aa13.81□□□□□ -0.2
CPSF4-210ENST00000469897 IGLV3-19P01714 112 aa13.81□□□□□ -0.2
CPSF4-210ENST00000469897 IGLV3-27P01718 113 aa13.81□□□□□ -0.2
CPSF4-210ENST00000469897 ATP5BP06576 529 aaKnown RBP13.81□□□□□ -0.2
CPSF4-210ENST00000469897 DLDP09622 509 aaKnown RBP13.81□□□□□ -0.2
CPSF4-210ENST00000469897 POLR2EP19388 210 aaKnown RBP13.81□□□□□ -0.2
CPSF4-210ENST00000469897 ACSL1P33121 698 aa13.81□□□□□ -0.2
CPSF4-210ENST00000469897 GPD2P43304 727 aa13.81□□□□□ -0.2
CPSF4-210ENST00000469897 GRIK2Q13002 908 aa13.81□□□□□ -0.2
CPSF4-210ENST00000469897 SLC14A1Q13336 389 aa13.81□□□□□ -0.2
CPSF4-210ENST00000469897 TRIP6Q15654 476 aaKnown RBP13.81□□□□□ -0.2
CPSF4-210ENST00000469897 FAM133BQ5BKY9 247 aaKnown RBP13.81□□□□□ -0.2
CPSF4-210ENST00000469897 MPP7Q5T2T1 576 aa13.81□□□□□ -0.2
CPSF4-210ENST00000469897 TRIM59Q8IWR1 403 aa13.81□□□□□ -0.2
CPSF4-210ENST00000469897 AHI1Q8N157 1196 aa13.81□□□□□ -0.2
CPSF4-210ENST00000469897 CHCHD4Q8N4Q1 142 aa13.81□□□□□ -0.2
CPSF4-210ENST00000469897 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.81□□□□□ -0.2
CPSF4-210ENST00000469897 MYEOVQ96EZ4 313 aa13.81□□□□□ -0.2
CPSF4-210ENST00000469897 KREMEN1Q96MU8 473 aa13.81□□□□□ -0.2
CPSF4-210ENST00000469897 TMEM121BQ9BXQ6 578 aaPredicted RBP13.81□□□□□ -0.2
CPSF4-210ENST00000469897 LHX5Q9H2C1 402 aa13.81□□□□□ -0.2
CPSF4-210ENST00000469897 MTG2Q9H4K7 406 aa13.81□□□□□ -0.2
CPSF4-210ENST00000469897 IL21RQ9HBE5 538 aa13.81□□□□□ -0.2
CPSF4-210ENST00000469897 UBE2TQ9NPD8 197 aaPredicted RBP13.81□□□□□ -0.2
CPSF4-210ENST00000469897 PRSS16Q9NQE7 514 aa13.81□□□□□ -0.2
CPSF4-210ENST00000469897 ST7Q9NRC1 585 aa13.81□□□□□ -0.2
CPSF4-210ENST00000469897 KLK13Q9UKR3 277 aa13.81□□□□□ -0.2
CPSF4-210ENST00000469897 CTNND2Q9UQB3 1225 aa13.81□□□□□ -0.2
CPSF4-210ENST00000469897 NFE2L3Q9Y4A8 694 aa13.81□□□□□ -0.2
CPSF4-210ENST00000469897 RALGAPA1Q6GYQ0 2036 aa13.81□□□□□ -0.2
CPSF4-210ENST00000469897 MYOFQ9NZM1 2061 aa13.81□□□□□ -0.2
CPSF4-210ENST00000469897 ACACBO00763 2458 aa13.8□□□□□ -0.2
CPSF4-210ENST00000469897 BICDL2A1A5D9 508 aa13.8□□□□□ -0.2
CPSF4-210ENST00000469897 BCAT2O15382 392 aaPredicted RBP13.8□□□□□ -0.2
CPSF4-210ENST00000469897 FBXO21O94952 628 aa13.8□□□□□ -0.2
CPSF4-210ENST00000469897 GNA14O95837 355 aa13.8□□□□□ -0.2
CPSF4-210ENST00000469897 AFPP02771 609 aaKnown RBP13.8□□□□□ -0.2
CPSF4-210ENST00000469897 RDXP35241 583 aaKnown RBP13.8□□□□□ -0.2
CPSF4-210ENST00000469897 RPS14P62263 151 aaKnown RBP13.8□□□□□ -0.2
CPSF4-210ENST00000469897 GCNT1Q02742 428 aa13.8□□□□□ -0.2
CPSF4-210ENST00000469897 RING1Q06587 406 aa13.8□□□□□ -0.2
CPSF4-210ENST00000469897 SYPL2Q5VXT5 272 aa13.8□□□□□ -0.2
CPSF4-210ENST00000469897 NUGGCQ68CJ6 796 aa13.8□□□□□ -0.2
CPSF4-210ENST00000469897 NADSYN1Q6IA69 706 aa13.8□□□□□ -0.2
CPSF4-210ENST00000469897 DENND1BQ6P3S1 775 aa13.8□□□□□ -0.2
CPSF4-210ENST00000469897 CREBRFQ8IUR6 639 aa13.8□□□□□ -0.2
CPSF4-210ENST00000469897 CFAP52Q8N1V2 620 aa13.8□□□□□ -0.2
CPSF4-210ENST00000469897 KDF1Q8NAX2 398 aaPredicted RBP13.8□□□□□ -0.2
CPSF4-210ENST00000469897 FIBINQ8TAL6 211 aa13.8□□□□□ -0.2
CPSF4-210ENST00000469897 ADAM32Q8TC27 787 aa13.8□□□□□ -0.2
CPSF4-210ENST00000469897 AZIN2Q96A70 460 aa13.8□□□□□ -0.2
CPSF4-210ENST00000469897 INTS2Q9H0H0 1204 aaKnown RBP13.8□□□□□ -0.2
CPSF4-210ENST00000469897 C6orf106Q9H6K1 298 aaPredicted RBP13.8□□□□□ -0.2
CPSF4-210ENST00000469897 SUN2Q9UH99 717 aa13.8□□□□□ -0.2
CPSF4-210ENST00000469897 PCDHB9Q9Y5E1 797 aa13.8□□□□□ -0.2
CPSF4-210ENST00000469897 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.8□□□□□ -0.2
CPSF4-210ENST00000469897 ZFHX4Q86UP3 3567 aa13.8□□□□□ -0.2
CPSF4-210ENST00000469897 EPG5Q9HCE0 2579 aa13.79□□□□□ -0.2
CPSF4-210ENST00000469897 LAMA1P25391 3075 aa13.79□□□□□ -0.2
CPSF4-210ENST00000469897 IRAK2O43187 625 aa13.79□□□□□ -0.2
CPSF4-210ENST00000469897 DNTTP04053 509 aa13.79□□□□□ -0.2
CPSF4-210ENST00000469897 KRT5P13647 590 aa13.79□□□□□ -0.2
CPSF4-210ENST00000469897 CSNK1EP49674 416 aaKnown RBP13.79□□□□□ -0.2
CPSF4-210ENST00000469897 RPS24P62847 133 aaKnown RBP13.79□□□□□ -0.2
CPSF4-210ENST00000469897 BNC1Q01954 994 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms