RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 FLCNQ8NFG4 579 aa6.61□□□□□ -1.35
SF3B1-206ENST00000462613 JOSD2Q8TAC2 188 aa6.61□□□□□ -1.35
SF3B1-206ENST00000462613 TTC8Q8TAM2 541 aa6.61□□□□□ -1.35
SF3B1-206ENST00000462613 UCMAQ8WVF2 138 aa6.61□□□□□ -1.35
SF3B1-206ENST00000462613 RFFLQ8WZ73 363 aa6.61□□□□□ -1.35
SF3B1-206ENST00000462613 CD101Q93033 1021 aa6.61□□□□□ -1.35
SF3B1-206ENST00000462613 NT5C3BQ969T7 300 aa6.61□□□□□ -1.35
SF3B1-206ENST00000462613 PBXIP1Q96AQ6 731 aa6.61□□□□□ -1.35
SF3B1-206ENST00000462613 SLC39A13Q96H72 371 aa6.61□□□□□ -1.35
SF3B1-206ENST00000462613 FCRL2Q96LA5 508 aaPredicted RBP6.61□□□□□ -1.35
SF3B1-206ENST00000462613 RPRD1AQ96P16 312 aaPredicted RBP6.61□□□□□ -1.35
SF3B1-206ENST00000462613 LRRC3BQ96PB8 259 aa6.61□□□□□ -1.35
SF3B1-206ENST00000462613 HAPLN3Q96S86 360 aa6.61□□□□□ -1.35
SF3B1-206ENST00000462613 PNKPQ96T60 521 aa6.61□□□□□ -1.35
SF3B1-206ENST00000462613 EIF3CQ99613 913 aaKnown RBP6.61□□□□□ -1.35
SF3B1-206ENST00000462613 EPAS1Q99814 870 aa6.61□□□□□ -1.35
SF3B1-206ENST00000462613 P2RY13Q9BPV8 354 aa6.61□□□□□ -1.35
SF3B1-206ENST00000462613 SLC2A11Q9BYW1 496 aa6.61□□□□□ -1.35
SF3B1-206ENST00000462613 OSBPL6Q9BZF3 934 aa6.61□□□□□ -1.35
SF3B1-206ENST00000462613 SIK2Q9H0K1 926 aa6.61□□□□□ -1.35
SF3B1-206ENST00000462613 LINC00597Q9H2U6 94 aa6.61□□□□□ -1.35
SF3B1-206ENST00000462613 TBC1D17Q9HA65 648 aa6.61□□□□□ -1.35
SF3B1-206ENST00000462613 HPS4Q9NQG7 708 aa6.61□□□□□ -1.35
SF3B1-206ENST00000462613 PIGVQ9NUD9 493 aa6.61□□□□□ -1.35
SF3B1-206ENST00000462613 MARK1Q9P0L2 795 aa6.61□□□□□ -1.35
SF3B1-206ENST00000462613 STIM2Q9P246 746 aa6.61□□□□□ -1.35
SF3B1-206ENST00000462613 NDRG2Q9UN36 371 aaKnown RBP6.61□□□□□ -1.35
SF3B1-206ENST00000462613 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.6□□□□□ -1.35
SF3B1-206ENST00000462613 A0A1B0GVM2 712 aa6.6□□□□□ -1.35
SF3B1-206ENST00000462613 TCRBV5S1A1TA0A578 114 aa6.6□□□□□ -1.35
SF3B1-206ENST00000462613 TCAF2A6NFQ2 919 aa6.6□□□□□ -1.35
SF3B1-206ENST00000462613 TMEM191CA6NGB0 347 aa6.6□□□□□ -1.35
SF3B1-206ENST00000462613 SOWAHDA6NJG2 315 aa6.6□□□□□ -1.35
SF3B1-206ENST00000462613 H0Y626 953 aa6.6□□□□□ -1.35
SF3B1-206ENST00000462613 ARNTLO00327 626 aa6.6□□□□□ -1.35
SF3B1-206ENST00000462613 ZBTB24O43167 697 aaPredicted RBP6.6□□□□□ -1.35
SF3B1-206ENST00000462613 HOXC11O43248 304 aaPredicted RBP6.6□□□□□ -1.35
SF3B1-206ENST00000462613 CCP110O43303 1012 aa6.6□□□□□ -1.35
SF3B1-206ENST00000462613 KRT86O43790 486 aa6.6□□□□□ -1.35
SF3B1-206ENST00000462613 CACNG3O60359 315 aa6.6□□□□□ -1.35
SF3B1-206ENST00000462613 TBL1XO60907 577 aa6.6□□□□□ -1.35
SF3B1-206ENST00000462613 ATG13O75143 517 aa6.6□□□□□ -1.35
SF3B1-206ENST00000462613 PAGE1O75459 146 aa6.6□□□□□ -1.35
SF3B1-206ENST00000462613 ENDOD1O94919 500 aa6.6□□□□□ -1.35
SF3B1-206ENST00000462613 LCA5LO95447 670 aa6.6□□□□□ -1.35
SF3B1-206ENST00000462613 KLKB1P03952 638 aa6.6□□□□□ -1.35
SF3B1-206ENST00000462613 TACR2P21452 398 aa6.6□□□□□ -1.35
SF3B1-206ENST00000462613 ADRA1BP35368 520 aa6.6□□□□□ -1.35
SF3B1-206ENST00000462613 PCK1P35558 622 aa6.6□□□□□ -1.35
SF3B1-206ENST00000462613 ARHGAP25P42331 645 aa6.6□□□□□ -1.35
SF3B1-206ENST00000462613 CLCN5P51795 746 aa6.6□□□□□ -1.35
SF3B1-206ENST00000462613 ZNF135P52742 658 aaPredicted RBP6.6□□□□□ -1.35
SF3B1-206ENST00000462613 PITX1P78337 314 aaPredicted RBP6.6□□□□□ -1.35
SF3B1-206ENST00000462613 KIF5AQ12840 1032 aa6.6□□□□□ -1.35
SF3B1-206ENST00000462613 ZNF177Q13360 481 aaPredicted RBP6.6□□□□□ -1.35
SF3B1-206ENST00000462613 PON2Q15165 354 aa6.6□□□□□ -1.35
SF3B1-206ENST00000462613 C15orf59Q2T9L4 293 aaPredicted RBP6.6□□□□□ -1.35
SF3B1-206ENST00000462613 ASTE1Q2TB18 679 aaPredicted RBP6.6□□□□□ -1.35
SF3B1-206ENST00000462613 CCDC14Q49A88 953 aa6.6□□□□□ -1.35
SF3B1-206ENST00000462613 BOLA3Q53S33 107 aa6.6□□□□□ -1.35
SF3B1-206ENST00000462613 MS4A13Q5J8X5 152 aa6.6□□□□□ -1.35
SF3B1-206ENST00000462613 TMEM31Q5JXX7 168 aa6.6□□□□□ -1.35
SF3B1-206ENST00000462613 PPP1R15BQ5SWA1 713 aa6.6□□□□□ -1.35
SF3B1-206ENST00000462613 PIK3R6Q5UE93 754 aa6.6□□□□□ -1.35
SF3B1-206ENST00000462613 RAP1GAP2Q684P5 730 aa6.6□□□□□ -1.35
SF3B1-206ENST00000462613 RHBDF2Q6PJF5 856 aa6.6□□□□□ -1.35
SF3B1-206ENST00000462613 TRMT11Q7Z4G4 463 aaKnown RBP6.6□□□□□ -1.35
SF3B1-206ENST00000462613 TMEM25Q86YD3 366 aa6.6□□□□□ -1.35
SF3B1-206ENST00000462613 MFN1Q8IWA4 741 aa6.6□□□□□ -1.35
SF3B1-206ENST00000462613 FAM217AQ8IXS0 508 aa6.6□□□□□ -1.35
SF3B1-206ENST00000462613 SYNPOQ8N3V7 929 aa6.6□□□□□ -1.35
SF3B1-206ENST00000462613 KHSRPQ92945 711 aaKnown RBP eCLIP6.6□□□□□ -1.351e-6■□□□□ 9.5
SF3B1-206ENST00000462613 BHMTQ93088 406 aa6.6□□□□□ -1.35
SF3B1-206ENST00000462613 NTAN1Q96AB6 310 aa6.6□□□□□ -1.35
SF3B1-206ENST00000462613 ASIC4Q96FT7 647 aa6.6□□□□□ -1.35
SF3B1-206ENST00000462613 C1orf74Q96LT6 269 aa6.6□□□□□ -1.35
SF3B1-206ENST00000462613 IER2Q9BTL4 223 aa6.6□□□□□ -1.35
SF3B1-206ENST00000462613 TSGA10Q9BZW7 698 aa6.6□□□□□ -1.35
SF3B1-206ENST00000462613 RETREG1Q9H6L5 497 aa6.6□□□□□ -1.35
SF3B1-206ENST00000462613 CATSPERBQ9H7T0 1116 aa6.6□□□□□ -1.35
SF3B1-206ENST00000462613 LTB4R2Q9NPC1 389 aa6.6□□□□□ -1.35
SF3B1-206ENST00000462613 ARHGEF4Q9NR80 690 aa6.6□□□□□ -1.35
SF3B1-206ENST00000462613 DNAJC17Q9NVM6 304 aaKnown RBP6.6□□□□□ -1.35
SF3B1-206ENST00000462613 ARHGEF38Q9NXL2 777 aa6.6□□□□□ -1.35
SF3B1-206ENST00000462613 STOML2Q9UJZ1 356 aa6.6□□□□□ -1.35
SF3B1-206ENST00000462613 VANGL2Q9ULK5 521 aa6.6□□□□□ -1.35
SF3B1-206ENST00000462613 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.6□□□□□ -1.35
SF3B1-206ENST00000462613 SIT1Q9Y3P8 196 aa6.6□□□□□ -1.35
SF3B1-206ENST00000462613 PCDHA13Q9Y5I0 950 aa6.6□□□□□ -1.35
SF3B1-206ENST00000462613 TTC28Q96AY4 2481 aa6.6□□□□□ -1.35
SF3B1-206ENST00000462613 UNC80Q8N2C7 3258 aa6.6□□□□□ -1.35
SF3B1-206ENST00000462613 CHD5Q8TDI0 1954 aa6.6□□□□□ -1.35
SF3B1-206ENST00000462613 NYNRINQ9P2P1 1898 aaKnown RBP6.6□□□□□ -1.35
SF3B1-206ENST00000462613 XIRP2A4UGR9 3374 aa6.59□□□□□ -1.35
SF3B1-206ENST00000462613 COL4A3Q01955 1670 aa6.59□□□□□ -1.35
SF3B1-206ENST00000462613 A0A0A6YYK5 440 aaPredicted RBP6.59□□□□□ -1.35
SF3B1-206ENST00000462613 TBC1D3BA6NDS4 549 aa6.59□□□□□ -1.35
SF3B1-206ENST00000462613 FAM170BA6NMN3 283 aa6.59□□□□□ -1.35
SF3B1-206ENST00000462613 PRR33A8MZF0 331 aa6.59□□□□□ -1.35
SF3B1-206ENST00000462613 TRDMT1O14717 391 aaKnown RBP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms