RNA–Protein interactions for RNA: ENST00000453371.2

AGAP1-209, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 1, human

TSL 5

Gene AGAP1, Length 2,138 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AGAP1-209	ENST00000453371	NAT9	Q9BTE0	207 aa		18.43	■□□□□ 0.54
AGAP1-209	ENST00000453371	TSSK1B	Q9BXA7	367 aa		18.43	■□□□□ 0.54
AGAP1-209	ENST00000453371	COX16	Q9P0S2	106 aa		18.43	■□□□□ 0.54
AGAP1-209	ENST00000453371	ARL5C	A6NH57	179 aa		18.43	■□□□□ 0.54
AGAP1-209	ENST00000453371	SDR42E2	A6NKP2	422 aa		18.43	■□□□□ 0.54
AGAP1-209	ENST00000453371	NRP1	O14786	923 aa		18.43	■□□□□ 0.54
AGAP1-209	ENST00000453371	DCLK1	O15075	740 aa		18.43	■□□□□ 0.54
AGAP1-209	ENST00000453371	ALDH1A2	O94788	518 aa		18.43	■□□□□ 0.54
AGAP1-209	ENST00000453371	TGDS	O95455	350 aa		18.43	■□□□□ 0.54
AGAP1-209	ENST00000453371	CSH1	P0DML2	217 aa		18.43	■□□□□ 0.54
AGAP1-209	ENST00000453371	CSH2	P0DML3	217 aa		18.43	■□□□□ 0.54
AGAP1-209	ENST00000453371	ZNF135	P52742	658 aa	Predicted RBP	18.43	■□□□□ 0.54
AGAP1-209	ENST00000453371	KCNJ2	P63252	427 aa		18.43	■□□□□ 0.54
AGAP1-209	ENST00000453371	GDF6	Q6KF10	455 aa	Predicted RBP	18.43	■□□□□ 0.54
AGAP1-209	ENST00000453371	MRPL10	Q7Z7H8	261 aa	Known RBP	18.43	■□□□□ 0.54
AGAP1-209	ENST00000453371	TRIM42	Q8IWZ5	723 aa		18.43	■□□□□ 0.54
AGAP1-209	ENST00000453371	THOC1	Q96FV9	657 aa	Known RBP	18.43	■□□□□ 0.54
AGAP1-209	ENST00000453371	SMARCD1	Q96GM5	515 aa		18.43	■□□□□ 0.54
AGAP1-209	ENST00000453371	UPF3A	Q9H1J1	476 aa	Known RBP	18.43	■□□□□ 0.54
AGAP1-209	ENST00000453371	C12orf65	Q9H3J6	166 aa	Known RBP	18.43	■□□□□ 0.54
AGAP1-209	ENST00000453371	SPC25	Q9HBM1	224 aa		18.43	■□□□□ 0.54
AGAP1-209	ENST00000453371	IGSF9	Q9P2J2	1179 aa		18.43	■□□□□ 0.54
AGAP1-209	ENST00000453371	MYBPHL	A2RUH7	354 aa		18.42	■□□□□ 0.54
AGAP1-209	ENST00000453371	YJEFN3	A6XGL0	299 aa		18.42	■□□□□ 0.54
AGAP1-209	ENST00000453371		E7ENQ6	273 aa		18.42	■□□□□ 0.54
AGAP1-209	ENST00000453371	RFPL1	O75677	317 aa		18.42	■□□□□ 0.54
AGAP1-209	ENST00000453371	ATP6V1G2	O95670	118 aa		18.42	■□□□□ 0.54
AGAP1-209	ENST00000453371	CHRNA1	P02708	482 aa		18.42	■□□□□ 0.54
AGAP1-209	ENST00000453371	CYBA	P13498	195 aa		18.42	■□□□□ 0.54
AGAP1-209	ENST00000453371	IGFBP6	P24592	240 aa	Predicted RBP	18.42	■□□□□ 0.54
AGAP1-209	ENST00000453371	GRIA1	P42261	906 aa		18.42	■□□□□ 0.54
AGAP1-209	ENST00000453371	SERPINB4	P48594	390 aa		18.42	■□□□□ 0.54
AGAP1-209	ENST00000453371	SEMA3B	Q13214	749 aa		18.42	■□□□□ 0.54
AGAP1-209	ENST00000453371	TRMT10B	Q6PF06	316 aa	Known RBP	18.42	■□□□□ 0.54
AGAP1-209	ENST00000453371	CXCL17	Q6UXB2	119 aa		18.42	■□□□□ 0.54
AGAP1-209	ENST00000453371	TTC17	Q96AE7	1141 aa		18.42	■□□□□ 0.54
AGAP1-209	ENST00000453371	TRIM55	Q9BYV6	548 aa		18.42	■□□□□ 0.54
AGAP1-209	ENST00000453371	PRDM12	Q9H4Q4	367 aa		18.42	■□□□□ 0.54
AGAP1-209	ENST00000453371	WDR6	Q9NNW5	1121 aa	Known RBP	18.42	■□□□□ 0.54
AGAP1-209	ENST00000453371	NPHS2	Q9NP85	383 aa		18.42	■□□□□ 0.54
AGAP1-209	ENST00000453371	PLLP	Q9Y342	182 aa		18.42	■□□□□ 0.54
AGAP1-209	ENST00000453371	SCN10A	Q9Y5Y9	1956 aa		18.41	■□□□□ 0.54
AGAP1-209	ENST00000453371	NCAM2	O15394	837 aa		18.41	■□□□□ 0.54
AGAP1-209	ENST00000453371	F9	P00740	461 aa		18.41	■□□□□ 0.54
AGAP1-209	ENST00000453371	RAB27A	P51159	221 aa		18.41	■□□□□ 0.54
AGAP1-209	ENST00000453371	MGAT3	Q09327	533 aa		18.41	■□□□□ 0.54
AGAP1-209	ENST00000453371	NAB1	Q13506	487 aa		18.41	■□□□□ 0.54
AGAP1-209	ENST00000453371	ARL13B	Q3SXY8	428 aa		18.41	■□□□□ 0.54
AGAP1-209	ENST00000453371	SWT1	Q5T5J6	900 aa	Known RBP	18.41	■□□□□ 0.54
AGAP1-209	ENST00000453371	AGMO	Q6ZNB7	445 aa		18.41	■□□□□ 0.54
AGAP1-209	ENST00000453371	TIFAB	Q6ZNK6	161 aa		18.41	■□□□□ 0.54
AGAP1-209	ENST00000453371	MARK2	Q7KZI7	788 aa	Known RBP	18.41	■□□□□ 0.54
AGAP1-209	ENST00000453371	NLRP9	Q7RTR0	991 aa		18.41	■□□□□ 0.54
AGAP1-209	ENST00000453371	PDCD7	Q8N8D1	485 aa	Known RBP	18.41	■□□□□ 0.54
AGAP1-209	ENST00000453371	CCNY	Q8ND76	341 aa		18.41	■□□□□ 0.54
AGAP1-209	ENST00000453371	ZMIZ2	Q8NF64	920 aa		18.41	■□□□□ 0.54
AGAP1-209	ENST00000453371	DEPDC1B	Q8WUY9	529 aa		18.41	■□□□□ 0.54
AGAP1-209	ENST00000453371	PTPRN2	Q92932	1015 aa		18.41	■□□□□ 0.54
AGAP1-209	ENST00000453371	TMPRSS4	Q9NRS4	437 aa		18.41	■□□□□ 0.54
AGAP1-209	ENST00000453371	MIOS	Q9NXC5	875 aa		18.41	■□□□□ 0.54
AGAP1-209	ENST00000453371	CACNG4	Q9UBN1	327 aa		18.41	■□□□□ 0.54
AGAP1-209	ENST00000453371	FBXW11	Q9UKB1	542 aa		18.41	■□□□□ 0.54
AGAP1-209	ENST00000453371	TRPM7	Q96QT4	1865 aa		18.41	■□□□□ 0.54
AGAP1-209	ENST00000453371	LTF	P02788	710 aa		18.41	■□□□□ 0.54
AGAP1-209	ENST00000453371	CTSH	P09668	335 aa		18.41	■□□□□ 0.54
AGAP1-209	ENST00000453371	PGAM1	P18669	254 aa		18.41	■□□□□ 0.54
AGAP1-209	ENST00000453371	SCNN1G	P51170	649 aa		18.41	■□□□□ 0.54
AGAP1-209	ENST00000453371	NKX3-2	P78367	333 aa		18.41	■□□□□ 0.54
AGAP1-209	ENST00000453371	WASHC5	Q12768	1159 aa		18.41	■□□□□ 0.54
AGAP1-209	ENST00000453371	UPP1	Q16831	310 aa		18.41	■□□□□ 0.54
AGAP1-209	ENST00000453371	INTS6L	Q5JSJ4	861 aa	Known RBP	18.41	■□□□□ 0.54
AGAP1-209	ENST00000453371	RGMB	Q6NW40	437 aa		18.41	■□□□□ 0.54
AGAP1-209	ENST00000453371	RNF169	Q8NCN4	708 aa		18.41	■□□□□ 0.54
AGAP1-209	ENST00000453371	C3orf58	Q8NDZ4	430 aa		18.41	■□□□□ 0.54
AGAP1-209	ENST00000453371	IRGQ	Q8WZA9	623 aa		18.41	■□□□□ 0.54
AGAP1-209	ENST00000453371	CDKL2	Q92772	493 aa		18.41	■□□□□ 0.54
AGAP1-209	ENST00000453371	LPP	Q93052	612 aa		18.41	■□□□□ 0.54
AGAP1-209	ENST00000453371	OXNAD1	Q96HP4	312 aa	Predicted RBP	18.41	■□□□□ 0.54
AGAP1-209	ENST00000453371	BRD8	Q9H0E9	1235 aa		18.41	■□□□□ 0.54
AGAP1-209	ENST00000453371	CSNK1G1	Q9HCP0	422 aa		18.41	■□□□□ 0.54
AGAP1-209	ENST00000453371	HGS	O14964	777 aa	Predicted RBP	18.4	■□□□□ 0.54
AGAP1-209	ENST00000453371	ZNF623	O75123	536 aa		18.4	■□□□□ 0.54
AGAP1-209	ENST00000453371	ODC1	P11926	461 aa		18.4	■□□□□ 0.54
AGAP1-209	ENST00000453371	NEFH	P12036	1026 aa		18.4	■□□□□ 0.54
AGAP1-209	ENST00000453371	PAX3	P23760	479 aa		18.4	■□□□□ 0.54
AGAP1-209	ENST00000453371	SLC8A1	P32418	973 aa		18.4	■□□□□ 0.54
AGAP1-209	ENST00000453371	AFF1	P51825	1210 aa	Known RBP	18.4	■□□□□ 0.54
AGAP1-209	ENST00000453371	MFSD14C	Q5VZR4	134 aa		18.4	■□□□□ 0.54
AGAP1-209	ENST00000453371	ZNF567	Q8N184	647 aa		18.4	■□□□□ 0.54
AGAP1-209	ENST00000453371	RAB3IP	Q96QF0	476 aa	Predicted RBP	18.4	■□□□□ 0.54
AGAP1-209	ENST00000453371	KCNK16	Q96T55	309 aa		18.4	■□□□□ 0.54
AGAP1-209	ENST00000453371	LRMDA	Q9H2I8	198 aa		18.4	■□□□□ 0.54
AGAP1-209	ENST00000453371	TIMM13	Q9Y5L4	95 aa	Predicted RBP	18.4	■□□□□ 0.54
AGAP1-209	ENST00000453371	WDR27	A2RRH5	827 aa		18.4	■□□□□ 0.54
AGAP1-209	ENST00000453371	HHLA1	C9JL84	531 aa		18.4	■□□□□ 0.54
AGAP1-209	ENST00000453371	NCAM1	P13591	858 aa		18.4	■□□□□ 0.54
AGAP1-209	ENST00000453371	ERCC2	P18074	760 aa		18.4	■□□□□ 0.54
AGAP1-209	ENST00000453371	TPI1	P60174	286 aa		18.4	■□□□□ 0.54
AGAP1-209	ENST00000453371	IFRD2	Q12894	506 aa	Predicted RBP	18.4	■□□□□ 0.54
AGAP1-209	ENST00000453371	CDHR3	Q6ZTQ4	885 aa		18.4	■□□□□ 0.54

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