RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 B9A039 149 aa4.95□□□□□ -1.62
HMGB1P16-201ENST00000447155 NCAM2O15394 837 aa4.95□□□□□ -1.62
HMGB1P16-201ENST00000447155 TK1P04183 234 aa4.95□□□□□ -1.62
HMGB1P16-201ENST00000447155 HSP90AB1P08238 724 aaKnown RBP4.95□□□□□ -1.62
HMGB1P16-201ENST00000447155 FAM163BP0C2L3 166 aa4.95□□□□□ -1.62
HMGB1P16-201ENST00000447155 INSRRP14616 1297 aa4.95□□□□□ -1.62
HMGB1P16-201ENST00000447155 DIO1P49895 249 aa4.95□□□□□ -1.62
HMGB1P16-201ENST00000447155 CCT8P50990 548 aa4.95□□□□□ -1.62
HMGB1P16-201ENST00000447155 PAPOLAP51003 745 aaKnown RBP4.95□□□□□ -1.62
HMGB1P16-201ENST00000447155 EEFSECP57772 596 aaKnown RBP4.95□□□□□ -1.62
HMGB1P16-201ENST00000447155 PSG6Q00889 435 aa4.95□□□□□ -1.62
HMGB1P16-201ENST00000447155 CUL4BQ13620 913 aa4.95□□□□□ -1.62
HMGB1P16-201ENST00000447155 CBFBQ13951 182 aa4.95□□□□□ -1.62
HMGB1P16-201ENST00000447155 ZNF169Q14929 603 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P16-201ENST00000447155 RPS6KA2Q15349 733 aa4.95□□□□□ -1.62
HMGB1P16-201ENST00000447155 ZNF569Q5MCW4 686 aa4.95□□□□□ -1.62
HMGB1P16-201ENST00000447155 MMS22LQ6ZRQ5 1243 aa4.95□□□□□ -1.62
HMGB1P16-201ENST00000447155 ZNF771Q7L3S4 317 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P16-201ENST00000447155 C2CD5Q86YS7 1000 aa4.95□□□□□ -1.62
HMGB1P16-201ENST00000447155 HERC6Q8IVU3 1022 aa4.95□□□□□ -1.62
HMGB1P16-201ENST00000447155 OR4N4Q8N0Y3 316 aa4.95□□□□□ -1.62
HMGB1P16-201ENST00000447155 PDCL2Q8N4E4 241 aa4.95□□□□□ -1.62
HMGB1P16-201ENST00000447155 AFG1LQ8WV93 481 aa4.95□□□□□ -1.62
HMGB1P16-201ENST00000447155 LARP4BQ92615 738 aaKnown RBP4.95□□□□□ -1.62
HMGB1P16-201ENST00000447155 USP13Q92995 863 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P16-201ENST00000447155 RILPL2Q969X0 211 aa4.95□□□□□ -1.62
HMGB1P16-201ENST00000447155 REXO5Q96IC2 774 aaKnown RBP4.95□□□□□ -1.62
HMGB1P16-201ENST00000447155 FAR2Q96K12 515 aa4.95□□□□□ -1.62
HMGB1P16-201ENST00000447155 PYM1Q9BRP8 204 aaKnown RBP4.95□□□□□ -1.62
HMGB1P16-201ENST00000447155 CINPQ9BW66 212 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P16-201ENST00000447155 TOR3AQ9H497 397 aa4.95□□□□□ -1.62
HMGB1P16-201ENST00000447155 CCDC134Q9H6E4 229 aa4.95□□□□□ -1.62
HMGB1P16-201ENST00000447155 G6PC2Q9NQR9 355 aa4.95□□□□□ -1.62
HMGB1P16-201ENST00000447155 DIAPH3Q9NSV4 1193 aa4.95□□□□□ -1.62
HMGB1P16-201ENST00000447155 LIN7CQ9NUP9 197 aaKnown RBP4.95□□□□□ -1.62
HMGB1P16-201ENST00000447155 ASAP1Q9ULH1 1129 aa4.95□□□□□ -1.62
HMGB1P16-201ENST00000447155 PCDHB7Q9Y5E2 793 aa4.95□□□□□ -1.62
HMGB1P16-201ENST00000447155 DNMBPQ6XZF7 1577 aa4.95□□□□□ -1.62
HMGB1P16-201ENST00000447155 BICRAQ9NZM4 1560 aa4.95□□□□□ -1.62
HMGB1P16-201ENST00000447155 KIF16BQ96L93 1317 aa4.95□□□□□ -1.62
HMGB1P16-201ENST00000447155 SALL3Q9BXA9 1300 aa4.95□□□□□ -1.62
HMGB1P16-201ENST00000447155 SLC38A8A6NNN8 435 aa4.94□□□□□ -1.62
HMGB1P16-201ENST00000447155 PRRG2O14669 202 aa4.94□□□□□ -1.62
HMGB1P16-201ENST00000447155 CA12O43570 354 aa4.94□□□□□ -1.62
HMGB1P16-201ENST00000447155 PTMAP06454 111 aaKnown RBP4.94□□□□□ -1.62
HMGB1P16-201ENST00000447155 TMIGD3P0DMS9 266 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P16-201ENST00000447155 ALADP13716 330 aa4.94□□□□□ -1.62
HMGB1P16-201ENST00000447155 ITPKBP27987 946 aa4.94□□□□□ -1.62
HMGB1P16-201ENST00000447155 SERPINA4P29622 427 aa4.94□□□□□ -1.62
HMGB1P16-201ENST00000447155 THBS4P35443 961 aa4.94□□□□□ -1.62
HMGB1P16-201ENST00000447155 MCM2P49736 904 aa4.94□□□□□ -1.62
HMGB1P16-201ENST00000447155 RIPK4P57078 832 aa4.94□□□□□ -1.62
HMGB1P16-201ENST00000447155 KRTAP10-2P60368 255 aa4.94□□□□□ -1.62
HMGB1P16-201ENST00000447155 LMAN2Q12907 356 aa4.94□□□□□ -1.62
HMGB1P16-201ENST00000447155 KLHL40Q2TBA0 621 aa4.94□□□□□ -1.62
HMGB1P16-201ENST00000447155 TBRG1Q3YBR2 411 aa4.94□□□□□ -1.62
HMGB1P16-201ENST00000447155 PCID2Q5JVF3 399 aa4.94□□□□□ -1.62
HMGB1P16-201ENST00000447155 TMEM63BQ5T3F8 832 aa4.94□□□□□ -1.62
HMGB1P16-201ENST00000447155 CCDC70Q6NSX1 233 aa4.94□□□□□ -1.62
HMGB1P16-201ENST00000447155 CTR9Q6PD62 1173 aa4.94□□□□□ -1.62
HMGB1P16-201ENST00000447155 ZNF804AQ7Z570 1209 aa4.94□□□□□ -1.62
HMGB1P16-201ENST00000447155 TBC1D5Q92609 795 aa4.94□□□□□ -1.62
HMGB1P16-201ENST00000447155 SYAP1Q96A49 352 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P16-201ENST00000447155 MCRS1Q96EZ8 462 aa4.94□□□□□ -1.62
HMGB1P16-201ENST00000447155 PRRX2Q99811 253 aa4.94□□□□□ -1.62
HMGB1P16-201ENST00000447155 MECRQ9BV79 373 aa4.94□□□□□ -1.62
HMGB1P16-201ENST00000447155 SAP30LQ9HAJ7 183 aa4.94□□□□□ -1.62
HMGB1P16-201ENST00000447155 RASSF1Q9NS23 344 aa4.94□□□□□ -1.62
HMGB1P16-201ENST00000447155 TMLHEQ9NVH6 421 aa4.94□□□□□ -1.62
HMGB1P16-201ENST00000447155 GJD2Q9UKL4 321 aa4.94□□□□□ -1.62
HMGB1P16-201ENST00000447155 RTEL1-TNFRSF6BF6WH68 1400 aa4.94□□□□□ -1.62
HMGB1P16-201ENST00000447155 DAPK1P53355 1430 aa4.94□□□□□ -1.62
HMGB1P16-201ENST00000447155 PTPRKQ15262 1439 aa4.94□□□□□ -1.62
HMGB1P16-201ENST00000447155 ADGRL2O95490 1459 aa4.94□□□□□ -1.62
HMGB1P16-201ENST00000447155 SHANK2Q9UPX8 1470 aa4.94□□□□□ -1.62
HMGB1P16-201ENST00000447155 IQGAP1P46940 1657 aa4.93□□□□□ -1.62
HMGB1P16-201ENST00000447155 CCDC187A0A096LP49 1063 aa4.93□□□□□ -1.62
HMGB1P16-201ENST00000447155 E7EVH7 732 aa4.93□□□□□ -1.62
HMGB1P16-201ENST00000447155 M0QZQ0 153 aa4.93□□□□□ -1.62
HMGB1P16-201ENST00000447155 NKX2-8O15522 239 aa4.93□□□□□ -1.62
HMGB1P16-201ENST00000447155 SUV39H1O43463 412 aa4.93□□□□□ -1.62
HMGB1P16-201ENST00000447155 PIK3C2GO75747 1445 aa4.93□□□□□ -1.62
HMGB1P16-201ENST00000447155 TFRCP02786 760 aaKnown RBP4.93□□□□□ -1.62
HMGB1P16-201ENST00000447155 ELFN1P0C7U0 828 aa4.93□□□□□ -1.62
HMGB1P16-201ENST00000447155 TNFRSF1AP19438 455 aa4.93□□□□□ -1.62
HMGB1P16-201ENST00000447155 DRD4P21917 467 aa4.93□□□□□ -1.62
HMGB1P16-201ENST00000447155 MATN1P21941 496 aa4.93□□□□□ -1.62
HMGB1P16-201ENST00000447155 IGHMBP2P38935 993 aaKnown RBP4.93□□□□□ -1.62
HMGB1P16-201ENST00000447155 CCDC15Q0P6D6 951 aa4.93□□□□□ -1.62
HMGB1P16-201ENST00000447155 WDR43Q15061 677 aaKnown RBP eCLIP4.93□□□□□ -1.62
HMGB1P16-201ENST00000447155 SMAD1Q15797 465 aaKnown RBP4.93□□□□□ -1.62
HMGB1P16-201ENST00000447155 FAM187BQ17R55 369 aa4.93□□□□□ -1.62
HMGB1P16-201ENST00000447155 FAM110CQ1W6H9 321 aa4.93□□□□□ -1.62
HMGB1P16-201ENST00000447155 AAK1Q2M2I8 961 aa4.93□□□□□ -1.62
HMGB1P16-201ENST00000447155 ZXDCQ2QGD7 858 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P16-201ENST00000447155 GALNTL6Q49A17 601 aa4.93□□□□□ -1.62
HMGB1P16-201ENST00000447155 LCE4AQ5TA78 99 aa4.93□□□□□ -1.62
HMGB1P16-201ENST00000447155 LAIR1Q6GTX8 287 aa4.93□□□□□ -1.62
HMGB1P16-201ENST00000447155 DGAT2L7PQ6IED9 249 aa4.93□□□□□ -1.62
HMGB1P16-201ENST00000447155 ACSM6Q6P461 480 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms