RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 SPATA16Q9BXB7 569 aa11.84□□□□□ -0.51
PTCH1-208ENST00000430669 TAS2R14Q9NYV8 317 aa11.84□□□□□ -0.51
PTCH1-208ENST00000430669 ARHGAP10A1A4S6 786 aa11.84□□□□□ -0.51
PTCH1-208ENST00000430669 STX7O15400 261 aaKnown RBP11.84□□□□□ -0.51
PTCH1-208ENST00000430669 HNRNPRO43390 633 aaKnown RBP11.84□□□□□ -0.51
PTCH1-208ENST00000430669 CSDE1O75534 798 aaKnown RBP11.84□□□□□ -0.51
PTCH1-208ENST00000430669 RHOBTB1O94844 696 aa11.84□□□□□ -0.51
PTCH1-208ENST00000430669 GNRH1P01148 92 aa11.84□□□□□ -0.51
PTCH1-208ENST00000430669 GHRP10912 638 aa11.84□□□□□ -0.51
PTCH1-208ENST00000430669 DPYSL3Q14195 570 aa11.84□□□□□ -0.51
PTCH1-208ENST00000430669 SEL1L3Q68CR1 1132 aa11.84□□□□□ -0.51
PTCH1-208ENST00000430669 MON1BQ7L1V2 547 aa11.84□□□□□ -0.51
PTCH1-208ENST00000430669 TBL1YQ9BQ87 522 aa11.84□□□□□ -0.51
PTCH1-208ENST00000430669 LATS2Q9NRM7 1088 aa11.84□□□□□ -0.51
PTCH1-208ENST00000430669 CES1P23141 567 aa11.84□□□□□ -0.51
PTCH1-208ENST00000430669 SLC25A52Q3SY17 297 aa11.84□□□□□ -0.51
PTCH1-208ENST00000430669 ARL8AQ96BM9 186 aa11.84□□□□□ -0.51
PTCH1-208ENST00000430669 NFKBIZQ9BYH8 718 aa11.84□□□□□ -0.51
PTCH1-208ENST00000430669 TSPYL2Q9H2G4 693 aaPredicted RBP11.84□□□□□ -0.51
PTCH1-208ENST00000430669 ARHGAP26Q9UNA1 814 aa11.84□□□□□ -0.51
PTCH1-208ENST00000430669 SCN9AQ15858 1988 aa11.84□□□□□ -0.51
PTCH1-208ENST00000430669 DUSP11O75319 330 aaKnown RBP11.84□□□□□ -0.51
PTCH1-208ENST00000430669 CSPG5O95196 566 aa11.84□□□□□ -0.51
PTCH1-208ENST00000430669 OR1E1P30953 314 aa11.84□□□□□ -0.51
PTCH1-208ENST00000430669 KDSRQ06136 332 aa11.84□□□□□ -0.51
PTCH1-208ENST00000430669 THAP1Q9NVV9 213 aa11.84□□□□□ -0.51
PTCH1-208ENST00000430669 STARD13Q9Y3M8 1113 aa11.84□□□□□ -0.51
PTCH1-208ENST00000430669 DAB1O75553 588 aa11.84□□□□□ -0.51
PTCH1-208ENST00000430669 KCNMB4Q86W47 210 aa11.84□□□□□ -0.51
PTCH1-208ENST00000430669 ACMSDQ8TDX5 336 aa11.84□□□□□ -0.51
PTCH1-208ENST00000430669 LENG9Q96B70 501 aa11.84□□□□□ -0.51
PTCH1-208ENST00000430669 ZNF214Q9UL59 606 aaPredicted RBP11.84□□□□□ -0.51
PTCH1-208ENST00000430669 NUP205Q92621 2012 aa11.84□□□□□ -0.51
PTCH1-208ENST00000430669 GCKP35557 465 aa11.84□□□□□ -0.51
PTCH1-208ENST00000430669 GP5P40197 560 aa11.84□□□□□ -0.51
PTCH1-208ENST00000430669 LRRC8EQ6NSJ5 796 aa11.84□□□□□ -0.51
PTCH1-208ENST00000430669 ADAM2Q99965 735 aa11.84□□□□□ -0.51
PTCH1-208ENST00000430669 ADAM28Q9UKQ2 775 aa11.84□□□□□ -0.51
PTCH1-208ENST00000430669 TKTP29401 623 aaKnown RBP11.84□□□□□ -0.51
PTCH1-208ENST00000430669 IKBKEQ14164 716 aa11.84□□□□□ -0.51
PTCH1-208ENST00000430669 LCLAT1Q6UWP7 414 aa11.84□□□□□ -0.51
PTCH1-208ENST00000430669 ANGPTL8Q6UXH0 198 aa11.84□□□□□ -0.51
PTCH1-208ENST00000430669 LONP2Q86WA8 852 aa11.84□□□□□ -0.51
PTCH1-208ENST00000430669 PALB2Q86YC2 1186 aa11.84□□□□□ -0.51
PTCH1-208ENST00000430669 BLOC1S5Q8TDH9 187 aa11.84□□□□□ -0.51
PTCH1-208ENST00000430669 MBTD1Q05BQ5 628 aa11.83□□□□□ -0.52
PTCH1-208ENST00000430669 HABP4Q5JVS0 413 aaKnown RBP11.83□□□□□ -0.52
PTCH1-208ENST00000430669 KCNT2Q6UVM3 1135 aa11.83□□□□□ -0.52
PTCH1-208ENST00000430669 HSD3B7Q9H2F3 369 aa11.83□□□□□ -0.52
PTCH1-208ENST00000430669 MMADHCQ9H3L0 296 aaPredicted RBP11.83□□□□□ -0.52
PTCH1-208ENST00000430669 DMAC2Q9NW81 257 aa11.83□□□□□ -0.52
PTCH1-208ENST00000430669 EPHB6O15197 1021 aa11.83□□□□□ -0.52
PTCH1-208ENST00000430669 ESRRBO95718 433 aa11.83□□□□□ -0.52
PTCH1-208ENST00000430669 PIGRP01833 764 aa11.83□□□□□ -0.52
PTCH1-208ENST00000430669 CKBP12277 381 aa11.83□□□□□ -0.52
PTCH1-208ENST00000430669 HSPA13P48723 471 aa11.83□□□□□ -0.52
PTCH1-208ENST00000430669 TUBP50607 506 aa11.83□□□□□ -0.52
PTCH1-208ENST00000430669 POU4F1Q01851 419 aa11.83□□□□□ -0.52
PTCH1-208ENST00000430669 PDCD2Q16342 344 aaPredicted RBP11.83□□□□□ -0.52
PTCH1-208ENST00000430669 BRMS1LQ5PSV4 323 aa11.83□□□□□ -0.52
PTCH1-208ENST00000430669 CRLS1Q9UJA2 301 aa11.83□□□□□ -0.52
PTCH1-208ENST00000430669 DNMT3LQ9UJW3 386 aa11.83□□□□□ -0.52
PTCH1-208ENST00000430669 E2F6O75461 281 aa11.83□□□□□ -0.52
PTCH1-208ENST00000430669 APLFQ8IW19 511 aaPredicted RBP11.83□□□□□ -0.52
PTCH1-208ENST00000430669 STK40Q8N2I9 435 aa11.83□□□□□ -0.52
PTCH1-208ENST00000430669 TKTL2Q9H0I9 626 aa11.83□□□□□ -0.52
PTCH1-208ENST00000430669 SEMA4AQ9H3S1 761 aa11.83□□□□□ -0.52
PTCH1-208ENST00000430669 ALG13Q9NP73 1137 aaKnown RBP11.83□□□□□ -0.52
PTCH1-208ENST00000430669 FER1L6Q2WGJ9 1857 aa11.83□□□□□ -0.52
PTCH1-208ENST00000430669 SLC12A8A0AV02 714 aa11.83□□□□□ -0.52
PTCH1-208ENST00000430669 MKRN4PQ13434 485 aaPredicted RBP11.83□□□□□ -0.52
PTCH1-208ENST00000430669 FAM187BQ17R55 369 aa11.83□□□□□ -0.52
PTCH1-208ENST00000430669 GAD1Q99259 594 aa11.83□□□□□ -0.52
PTCH1-208ENST00000430669 CLPBQ9H078 707 aa11.83□□□□□ -0.52
PTCH1-208ENST00000430669 VPS4BO75351 444 aa11.83□□□□□ -0.52
PTCH1-208ENST00000430669 BEX3Q00994 111 aa11.83□□□□□ -0.52
PTCH1-208ENST00000430669 SPIRE1Q08AE8 756 aa11.83□□□□□ -0.52
PTCH1-208ENST00000430669 ANKS3Q6ZW76 656 aa11.83□□□□□ -0.52
PTCH1-208ENST00000430669 MAML3Q96JK9 1138 aa11.83□□□□□ -0.52
PTCH1-208ENST00000430669 ZNF333Q96JL9 665 aa11.83□□□□□ -0.52
PTCH1-208ENST00000430669 NT5MQ9NPB1 228 aa11.83□□□□□ -0.52
PTCH1-208ENST00000430669 ETNK2Q9NVF9 386 aa11.83□□□□□ -0.52
PTCH1-208ENST00000430669 FZD1Q9UP38 647 aa11.83□□□□□ -0.52
PTCH1-208ENST00000430669 RUVBL2Q9Y230 463 aaKnown RBP11.83□□□□□ -0.52
PTCH1-208ENST00000430669 F8VP50 259 aa11.83□□□□□ -0.52
PTCH1-208ENST00000430669 LGR5O75473 907 aa11.83□□□□□ -0.52
PTCH1-208ENST00000430669 TPBGLP0DKB5 382 aa11.83□□□□□ -0.52
PTCH1-208ENST00000430669 ALADP13716 330 aa11.83□□□□□ -0.52
PTCH1-208ENST00000430669 TNFSF9P41273 254 aa11.83□□□□□ -0.52
PTCH1-208ENST00000430669 OLFML2BQ68BL8 750 aa11.83□□□□□ -0.52
PTCH1-208ENST00000430669 NUP93Q8N1F7 819 aa11.83□□□□□ -0.52
PTCH1-208ENST00000430669 ZNF112Q9UJU3 913 aa11.83□□□□□ -0.52
PTCH1-208ENST00000430669 G3BP2Q9UN86 482 aaKnown RBP11.83□□□□□ -0.52
PTCH1-208ENST00000430669 ZNF510Q9Y2H8 683 aa11.83□□□□□ -0.52
PTCH1-208ENST00000430669 hCG_1818297A0A087WSY0 165 aa11.82□□□□□ -0.52
PTCH1-208ENST00000430669 TBKBP1A7MCY6 615 aa11.82□□□□□ -0.52
PTCH1-208ENST00000430669 SRP72O76094 671 aaKnown RBP11.82□□□□□ -0.52
PTCH1-208ENST00000430669 CKMP06732 381 aa11.82□□□□□ -0.52
PTCH1-208ENST00000430669 MAPK8P45983 427 aa11.82□□□□□ -0.52
PTCH1-208ENST00000430669 POLR2LP62875 67 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms