RNA–Protein interactions for RNA: ENST00000424634.5

NUP50-207, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-207ENST00000424634 ASCC3Q8N3C0 2202 aaKnown RBP19.2■□□□□ 0.66
NUP50-207ENST00000424634 TBL1XO60907 577 aa19.19■□□□□ 0.66
NUP50-207ENST00000424634 SLC11A2P49281 568 aa19.19■□□□□ 0.66
NUP50-207ENST00000424634 COPAP53621 1224 aa19.19■□□□□ 0.66
NUP50-207ENST00000424634 ZNF33AQ06730 810 aa19.19■□□□□ 0.66
NUP50-207ENST00000424634 STARD3Q14849 445 aa19.19■□□□□ 0.66
NUP50-207ENST00000424634 TPD52L1Q16890 204 aaPredicted RBP19.19■□□□□ 0.66
NUP50-207ENST00000424634 HSP90AA4PQ58FG1 418 aa19.19■□□□□ 0.66
NUP50-207ENST00000424634 TRIM61Q5EBN2 209 aa19.19■□□□□ 0.66
NUP50-207ENST00000424634 MIIPQ5JXC2 388 aa19.19■□□□□ 0.66
NUP50-207ENST00000424634 PEAR1Q5VY43 1037 aaPredicted RBP19.19■□□□□ 0.66
NUP50-207ENST00000424634 CLEC17AQ6ZS10 378 aa19.19■□□□□ 0.66
NUP50-207ENST00000424634 BEND5Q7L4P6 421 aa19.19■□□□□ 0.66
NUP50-207ENST00000424634 METTL3Q86U44 580 aaKnown RBP19.19■□□□□ 0.66
NUP50-207ENST00000424634 TAC4Q86UU9 113 aa19.19■□□□□ 0.66
NUP50-207ENST00000424634 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.19■□□□□ 0.66
NUP50-207ENST00000424634 CYB5D2Q8WUJ1 264 aa19.19■□□□□ 0.66
NUP50-207ENST00000424634 LMLNQ96KR4 655 aa19.19■□□□□ 0.66
NUP50-207ENST00000424634 PRDM16Q9HAZ2 1276 aa19.19■□□□□ 0.66
NUP50-207ENST00000424634 ITM2CQ9NQX7 267 aa19.19■□□□□ 0.66
NUP50-207ENST00000424634 LMBRD1Q9NUN5 540 aa19.19■□□□□ 0.66
NUP50-207ENST00000424634 TLR6Q9Y2C9 796 aa19.19■□□□□ 0.66
NUP50-207ENST00000424634 KCNJ18B7U540 433 aa19.18■□□□□ 0.66
NUP50-207ENST00000424634 FOXN3O00409 490 aaPredicted RBP19.18■□□□□ 0.66
NUP50-207ENST00000424634 SART1O43290 800 aaKnown RBP19.18■□□□□ 0.66
NUP50-207ENST00000424634 HLA-EP13747 358 aa19.18■□□□□ 0.66
NUP50-207ENST00000424634 ERCC5P28715 1186 aaPredicted RBP19.18■□□□□ 0.66
NUP50-207ENST00000424634 CD70P32970 193 aa19.18■□□□□ 0.66
NUP50-207ENST00000424634 PITX1P78337 314 aaPredicted RBP19.18■□□□□ 0.66
NUP50-207ENST00000424634 PDCLQ13371 301 aa19.18■□□□□ 0.66
NUP50-207ENST00000424634 MAN2A1Q16706 1144 aa19.18■□□□□ 0.66
NUP50-207ENST00000424634 MPP7Q5T2T1 576 aa19.18■□□□□ 0.66
NUP50-207ENST00000424634 CHST9Q7L1S5 443 aa19.18■□□□□ 0.66
NUP50-207ENST00000424634 TMPRSS6Q8IU80 811 aa19.18■□□□□ 0.66
NUP50-207ENST00000424634 ZNF419Q96HQ0 510 aaPredicted RBP19.18■□□□□ 0.66
NUP50-207ENST00000424634 PRICKLE1Q96MT3 831 aaPredicted RBP19.18■□□□□ 0.66
NUP50-207ENST00000424634 SERPINB11Q96P15 392 aa19.18■□□□□ 0.66
NUP50-207ENST00000424634 NUP62CLQ9H1M0 184 aa19.18■□□□□ 0.66
NUP50-207ENST00000424634 STIM2Q9P246 746 aa19.18■□□□□ 0.66
NUP50-207ENST00000424634 USP36Q9P275 1121 aaKnown RBP19.18■□□□□ 0.66
NUP50-207ENST00000424634 XPO7Q9UIA9 1087 aaKnown RBP19.18■□□□□ 0.66
NUP50-207ENST00000424634 GGA2Q9UJY4 613 aa19.18■□□□□ 0.66
NUP50-207ENST00000424634 DNAJC12Q9UKB3 198 aa19.18■□□□□ 0.66
NUP50-207ENST00000424634 MUC22E2RYF6 1773 aaPredicted RBP19.18■□□□□ 0.66
NUP50-207ENST00000424634 IRAK2O43187 625 aa19.17■□□□□ 0.66
NUP50-207ENST00000424634 SYNCRIPO60506 623 aaKnown RBP19.17■□□□□ 0.66
NUP50-207ENST00000424634 IGLV3-25P01717 112 aa19.17■□□□□ 0.66
NUP50-207ENST00000424634 EPHX1P07099 455 aa19.17■□□□□ 0.66
NUP50-207ENST00000424634 PNMA6AP0CW24 399 aaPredicted RBP19.17■□□□□ 0.66
NUP50-207ENST00000424634 PABPC1P11940 636 aaKnown RBP19.17■□□□□ 0.66
NUP50-207ENST00000424634 KCNA4P22459 653 aa19.17■□□□□ 0.66
NUP50-207ENST00000424634 CLCN1P35523 988 aa19.17■□□□□ 0.66
NUP50-207ENST00000424634 RPS24P62847 133 aaKnown RBP19.17■□□□□ 0.66
NUP50-207ENST00000424634 YWHAZP63104 245 aaKnown RBP19.17■□□□□ 0.66
NUP50-207ENST00000424634 KCNMA1Q12791 1236 aa19.17■□□□□ 0.66
NUP50-207ENST00000424634 NNTQ13423 1086 aa19.17■□□□□ 0.66
NUP50-207ENST00000424634 EIF4EBP2Q13542 120 aaPredicted RBP19.17■□□□□ 0.66
NUP50-207ENST00000424634 PTPRNQ16849 979 aa19.17■□□□□ 0.66
NUP50-207ENST00000424634 VWA3BQ502W6 1294 aa19.17■□□□□ 0.66
NUP50-207ENST00000424634 SLC23A3Q6PIS1 610 aa19.17■□□□□ 0.66
NUP50-207ENST00000424634 SERPINA13PQ6UXR4 307 aa19.17■□□□□ 0.66
NUP50-207ENST00000424634 PASD1Q8IV76 773 aa19.17■□□□□ 0.66
NUP50-207ENST00000424634 WFIKKN2Q8TEU8 576 aa19.17■□□□□ 0.66
NUP50-207ENST00000424634 CPXM1Q96SM3 734 aa19.17■□□□□ 0.66
NUP50-207ENST00000424634 TUBGCP2Q9BSJ2 902 aa19.17■□□□□ 0.66
NUP50-207ENST00000424634 IRX2Q9BZI1 471 aaPredicted RBP19.17■□□□□ 0.66
NUP50-207ENST00000424634 NUCKS1Q9H1E3 243 aaKnown RBP19.17■□□□□ 0.66
NUP50-207ENST00000424634 TMEM245Q9H330 911 aa19.17■□□□□ 0.66
NUP50-207ENST00000424634 NDST4Q9H3R1 872 aa19.17■□□□□ 0.66
NUP50-207ENST00000424634 POPDC2Q9HBU9 364 aa19.17■□□□□ 0.66
NUP50-207ENST00000424634 TMEM9BQ9NQ34 198 aa19.17■□□□□ 0.66
NUP50-207ENST00000424634 FSCN3Q9NQT6 498 aa19.17■□□□□ 0.66
NUP50-207ENST00000424634 SAMSN1Q9NSI8 373 aaKnown RBP19.17■□□□□ 0.66
NUP50-207ENST00000424634 PCDHGC3Q9UN70 934 aa19.17■□□□□ 0.66
NUP50-207ENST00000424634 ACACBO00763 2458 aa19.16■□□□□ 0.66
NUP50-207ENST00000424634 CAPN9O14815 690 aa19.16■□□□□ 0.66
NUP50-207ENST00000424634 KCNK5O95279 499 aa19.16■□□□□ 0.66
NUP50-207ENST00000424634 E2F5Q15329 346 aa19.16■□□□□ 0.66
NUP50-207ENST00000424634 ZC3H12AQ5D1E8 599 aaKnown RBP19.16■□□□□ 0.66
NUP50-207ENST00000424634 MS4A13Q5J8X5 152 aa19.16■□□□□ 0.66
NUP50-207ENST00000424634 N4BP2L1Q5TBK1 243 aaPredicted RBP19.16■□□□□ 0.66
NUP50-207ENST00000424634 MBLAC2Q68D91 279 aa19.16■□□□□ 0.66
NUP50-207ENST00000424634 SLC47A2Q86VL8 602 aa19.16■□□□□ 0.66
NUP50-207ENST00000424634 AHI1Q8N157 1196 aa19.16■□□□□ 0.66
NUP50-207ENST00000424634 CFAP52Q8N1V2 620 aa19.16■□□□□ 0.66
NUP50-207ENST00000424634 ZNF366Q8N895 744 aa19.16■□□□□ 0.66
NUP50-207ENST00000424634 FIBINQ8TAL6 211 aa19.16■□□□□ 0.66
NUP50-207ENST00000424634 SIPA1Q96FS4 1042 aa19.16■□□□□ 0.66
NUP50-207ENST00000424634 TOE1Q96GM8 510 aaKnown RBP19.16■□□□□ 0.66
NUP50-207ENST00000424634 PPP1R13BQ96KQ4 1090 aa19.16■□□□□ 0.66
NUP50-207ENST00000424634 HSPA12BQ96MM6 686 aa19.16■□□□□ 0.66
NUP50-207ENST00000424634 NUSAP1Q9BXS6 441 aaKnown RBP19.16■□□□□ 0.66
NUP50-207ENST00000424634 WSB2Q9NYS7 404 aaPredicted RBP19.16■□□□□ 0.66
NUP50-207ENST00000424634 PLA2G4CQ9UP65 541 aa19.16■□□□□ 0.66
NUP50-207ENST00000424634 NUMA1Q14980 2115 aa19.16■□□□□ 0.66
NUP50-207ENST00000424634 CHD8Q9HCK8 2581 aa19.16■□□□□ 0.66
NUP50-207ENST00000424634 NDUFS2O75306 463 aa19.15■□□□□ 0.66
NUP50-207ENST00000424634 TRUB2O95900 331 aaKnown RBP19.15■□□□□ 0.66
NUP50-207ENST00000424634 MOCS2O96007 188 aaPredicted RBP19.15■□□□□ 0.66
NUP50-207ENST00000424634 PRKCSHP14314 528 aaPredicted RBP19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms