RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 BHLHA9Q7RTU4 235 aa15.67■□□□□ 0.1
SCAMP4-202ENST00000409472 HTR3CQ8WXA8 447 aa15.67■□□□□ 0.1
SCAMP4-202ENST00000409472 KCTD13Q8WZ19 329 aa15.67■□□□□ 0.1
SCAMP4-202ENST00000409472 EDEM1Q92611 657 aa15.67■□□□□ 0.1
SCAMP4-202ENST00000409472 SIGLEC10Q96LC7 697 aa15.67■□□□□ 0.1
SCAMP4-202ENST00000409472 TMEM209Q96SK2 561 aa15.67■□□□□ 0.1
SCAMP4-202ENST00000409472 PPCSQ9HAB8 311 aa15.67■□□□□ 0.1
SCAMP4-202ENST00000409472 WDR6Q9NNW5 1121 aaKnown RBP15.67■□□□□ 0.1
SCAMP4-202ENST00000409472 ADAMTS4O75173 837 aa15.67■□□□□ 0.1
SCAMP4-202ENST00000409472 DNAJC8O75937 253 aaPredicted RBP15.67■□□□□ 0.1
SCAMP4-202ENST00000409472 ITGB1P05556 798 aa15.67■□□□□ 0.1
SCAMP4-202ENST00000409472 CCND3P30281 292 aaPredicted RBP15.67■□□□□ 0.1
SCAMP4-202ENST00000409472 NOS2P35228 1153 aa15.67■□□□□ 0.1
SCAMP4-202ENST00000409472 PRKCZQ05513 592 aa15.67■□□□□ 0.1
SCAMP4-202ENST00000409472 DEUP1Q05D60 604 aa15.67■□□□□ 0.1
SCAMP4-202ENST00000409472 ANKRD20A2Q5SQ80 823 aa15.67■□□□□ 0.1
SCAMP4-202ENST00000409472 ANKRD20A1Q5TYW2 823 aa15.67■□□□□ 0.1
SCAMP4-202ENST00000409472 HHATQ5VTY9 493 aa15.67■□□□□ 0.1
SCAMP4-202ENST00000409472 ANKRD20A3Q5VUR7 823 aa15.67■□□□□ 0.1
SCAMP4-202ENST00000409472 CDHR3Q6ZTQ4 885 aa15.67■□□□□ 0.1
SCAMP4-202ENST00000409472 SH2D5Q6ZV89 423 aa15.67■□□□□ 0.1
SCAMP4-202ENST00000409472 TMLHEQ9NVH6 421 aa15.67■□□□□ 0.1
SCAMP4-202ENST00000409472 SEPT10Q9P0V9 454 aa15.67■□□□□ 0.1
SCAMP4-202ENST00000409472 PADI3Q9ULW8 664 aa15.67■□□□□ 0.1
SCAMP4-202ENST00000409472 ARL2BPQ9Y2Y0 163 aa15.67■□□□□ 0.1
SCAMP4-202ENST00000409472 MAD1L1Q9Y6D9 718 aa15.67■□□□□ 0.1
SCAMP4-202ENST00000409472 TDRD15B5MCY1 1934 aaKnown RBP15.66■□□□□ 0.1
SCAMP4-202ENST00000409472 HHLA1C9JL84 531 aa15.66■□□□□ 0.1
SCAMP4-202ENST00000409472 RNF103O00237 685 aa15.66■□□□□ 0.1
SCAMP4-202ENST00000409472 LIN7AO14910 233 aaPredicted RBP15.66■□□□□ 0.1
SCAMP4-202ENST00000409472 ATP6V1G2O95670 118 aa15.66■□□□□ 0.1
SCAMP4-202ENST00000409472 ASGR1P07306 291 aa15.66■□□□□ 0.1
SCAMP4-202ENST00000409472 PYGBP11216 843 aa15.66■□□□□ 0.1
SCAMP4-202ENST00000409472 SLC18A1P54219 525 aa15.66■□□□□ 0.1
SCAMP4-202ENST00000409472 AP1B1Q10567 949 aa15.66■□□□□ 0.1
SCAMP4-202ENST00000409472 UPP1Q16831 310 aa15.66■□□□□ 0.1
SCAMP4-202ENST00000409472 BZW1Q7L1Q6 419 aaKnown RBP15.66■□□□□ 0.1
SCAMP4-202ENST00000409472 SPDYE1Q8NFV5 336 aaPredicted RBP15.66■□□□□ 0.1
SCAMP4-202ENST00000409472 DEPDC1BQ8WUY9 529 aa15.66■□□□□ 0.1
SCAMP4-202ENST00000409472 NSMCE1Q8WV22 266 aa15.66■□□□□ 0.1
SCAMP4-202ENST00000409472 TFB1MQ8WVM0 346 aaKnown RBP15.66■□□□□ 0.1
SCAMP4-202ENST00000409472 TSPAN18Q96SJ8 248 aa15.66■□□□□ 0.1
SCAMP4-202ENST00000409472 TRIM33Q9UPN9 1127 aa15.66■□□□□ 0.1
SCAMP4-202ENST00000409472 INPP5FQ9Y2H2 1132 aa15.66■□□□□ 0.1
SCAMP4-202ENST00000409472 MRPL42Q9Y6G3 142 aaKnown RBP15.66■□□□□ 0.1
SCAMP4-202ENST00000409472 TOP3BO95985 862 aaKnown RBP15.65■□□□□ 0.1
SCAMP4-202ENST00000409472 INHBAP08476 426 aa15.65■□□□□ 0.1
SCAMP4-202ENST00000409472 ATP2A2P16615 1042 aaKnown RBP15.65■□□□□ 0.1
SCAMP4-202ENST00000409472 NR2C2P49116 596 aa15.65■□□□□ 0.1
SCAMP4-202ENST00000409472 NCALDP61601 193 aa15.65■□□□□ 0.1
SCAMP4-202ENST00000409472 DPYSQ14117 519 aa15.65■□□□□ 0.1
SCAMP4-202ENST00000409472 CD300LGQ6UXG3 332 aa15.65■□□□□ 0.1
SCAMP4-202ENST00000409472 NPWQ8N729 165 aa15.65■□□□□ 0.1
SCAMP4-202ENST00000409472 PDCD7Q8N8D1 485 aaKnown RBP15.65■□□□□ 0.1
SCAMP4-202ENST00000409472 MYLPFQ96A32 169 aa15.65■□□□□ 0.1
SCAMP4-202ENST00000409472 P2RY11Q96G91 374 aa15.65■□□□□ 0.1
SCAMP4-202ENST00000409472 PRDM12Q9H4Q4 367 aa15.65■□□□□ 0.1
SCAMP4-202ENST00000409472 NOD2Q9HC29 1040 aa15.65■□□□□ 0.1
SCAMP4-202ENST00000409472 SLC38A7Q9NVC3 462 aa15.65■□□□□ 0.1
SCAMP4-202ENST00000409472 TRIM49D1C9J1S8 452 aa15.65■□□□□ 0.1
SCAMP4-202ENST00000409472 EDF1O60869 148 aaKnown RBP15.65■□□□□ 0.1
SCAMP4-202ENST00000409472 NEFHP12036 1026 aa15.65■□□□□ 0.1
SCAMP4-202ENST00000409472 ELNP15502 786 aa15.65■□□□□ 0.1
SCAMP4-202ENST00000409472 TSHRP16473 764 aa15.65■□□□□ 0.1
SCAMP4-202ENST00000409472 ZFXP17010 805 aaPredicted RBP15.65■□□□□ 0.1
SCAMP4-202ENST00000409472 CACNB2Q08289 660 aaPredicted RBP15.65■□□□□ 0.1
SCAMP4-202ENST00000409472 SEMA5AQ13591 1074 aa15.65■□□□□ 0.1
SCAMP4-202ENST00000409472 PRKD1Q15139 912 aaPredicted RBP15.65■□□□□ 0.1
SCAMP4-202ENST00000409472 SLC5A9Q2M3M2 681 aa15.65■□□□□ 0.1
SCAMP4-202ENST00000409472 GALNTL6Q49A17 601 aa15.65■□□□□ 0.1
SCAMP4-202ENST00000409472 RFX8Q6ZV50 586 aa15.65■□□□□ 0.1
SCAMP4-202ENST00000409472 OTOAQ7RTW8 1153 aa15.65■□□□□ 0.1
SCAMP4-202ENST00000409472 LRRC8CQ8TDW0 803 aa15.65■□□□□ 0.1
SCAMP4-202ENST00000409472 ZNF75CPQ92670 426 aaPredicted RBP15.65■□□□□ 0.1
SCAMP4-202ENST00000409472 TRMT13Q9NUP7 481 aaKnown RBP15.65■□□□□ 0.1
SCAMP4-202ENST00000409472 IL1RAPL1Q9NZN1 696 aa15.65■□□□□ 0.1
SCAMP4-202ENST00000409472 CORO1CQ9ULV4 474 aaPredicted RBP15.65■□□□□ 0.1
SCAMP4-202ENST00000409472 C15orf41Q9Y2V0 281 aa15.65■□□□□ 0.1
SCAMP4-202ENST00000409472 SHROOM3Q8TF72 1996 aa15.65■□□□□ 0.1
SCAMP4-202ENST00000409472 TTC3P53804 2025 aa15.65■□□□□ 0.1
SCAMP4-202ENST00000409472 NUP205Q92621 2012 aa15.65■□□□□ 0.1
SCAMP4-202ENST00000409472 A0A0A0MRY4 1105 aa15.64■□□□□ 0.09
SCAMP4-202ENST00000409472 HMX2A2RU54 273 aa15.64■□□□□ 0.09
SCAMP4-202ENST00000409472 KCNK1O00180 336 aa15.64■□□□□ 0.09
SCAMP4-202ENST00000409472 AHCYL1O43865 530 aa15.64■□□□□ 0.09
SCAMP4-202ENST00000409472 B4GALT3O60512 393 aa15.64■□□□□ 0.09
SCAMP4-202ENST00000409472 ZWINTO95229 277 aa15.64■□□□□ 0.09
SCAMP4-202ENST00000409472 MT-ND3P03897 115 aa15.64■□□□□ 0.09
SCAMP4-202ENST00000409472 NCAM1P13591 858 aa15.64■□□□□ 0.09
SCAMP4-202ENST00000409472 PSMB4P28070 264 aa15.64■□□□□ 0.09
SCAMP4-202ENST00000409472 NEK3P51956 506 aa15.64■□□□□ 0.09
SCAMP4-202ENST00000409472 WASHC5Q12768 1159 aa15.64■□□□□ 0.09
SCAMP4-202ENST00000409472 OVGP1Q12889 678 aa15.64■□□□□ 0.09
SCAMP4-202ENST00000409472 RGS9BPQ6ZS82 235 aa15.64■□□□□ 0.09
SCAMP4-202ENST00000409472 MCUQ8NE86 351 aa15.64■□□□□ 0.09
SCAMP4-202ENST00000409472 SPATA13Q96N96 652 aa15.64■□□□□ 0.09
SCAMP4-202ENST00000409472 FAM111AQ96PZ2 611 aa15.64■□□□□ 0.09
SCAMP4-202ENST00000409472 UPF3AQ9H1J1 476 aaKnown RBP15.64■□□□□ 0.09
SCAMP4-202ENST00000409472 SSU72Q9NP77 194 aaKnown RBP15.64■□□□□ 0.09
SCAMP4-202ENST00000409472 PNPLA8Q9NP80 782 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms