RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 PYROXD2Q8N2H3 581 aa9.34□□□□□ -0.91
SMARCA1-202ENST00000371122 PBXIP1Q96AQ6 731 aa9.34□□□□□ -0.91
SMARCA1-202ENST00000371122 ADAM2Q99965 735 aa9.34□□□□□ -0.91
SMARCA1-202ENST00000371122 ZFYVE28Q9HCC9 887 aa9.34□□□□□ -0.91
SMARCA1-202ENST00000371122 BTBD7Q9P203 1132 aa9.34□□□□□ -0.91
SMARCA1-202ENST00000371122 TUBGCP4Q9UGJ1 667 aa9.34□□□□□ -0.91
SMARCA1-202ENST00000371122 SNX10Q9Y5X0 201 aa9.34□□□□□ -0.91
SMARCA1-202ENST00000371122 FKBP9O95302 570 aa9.34□□□□□ -0.91
SMARCA1-202ENST00000371122 STMN1P16949 149 aa9.34□□□□□ -0.91
SMARCA1-202ENST00000371122 FGFR3P22607 806 aa9.34□□□□□ -0.91
SMARCA1-202ENST00000371122 CXCR3P49682 368 aa9.34□□□□□ -0.91
SMARCA1-202ENST00000371122 SLC6A3Q01959 620 aa9.34□□□□□ -0.91
SMARCA1-202ENST00000371122 USP4Q13107 963 aa9.34□□□□□ -0.91
SMARCA1-202ENST00000371122 CTBP1Q13363 440 aa9.34□□□□□ -0.91
SMARCA1-202ENST00000371122 CELF3Q5SZQ8 465 aaKnown RBP9.34□□□□□ -0.91
SMARCA1-202ENST00000371122 FAM171A1Q5VUB5 890 aa9.34□□□□□ -0.91
SMARCA1-202ENST00000371122 OLFML2BQ68BL8 750 aa9.34□□□□□ -0.91
SMARCA1-202ENST00000371122 PPP4R4Q6NUP7 873 aa9.34□□□□□ -0.91
SMARCA1-202ENST00000371122 UNC5AQ6ZN44 842 aa9.34□□□□□ -0.91
SMARCA1-202ENST00000371122 FKBP9P1Q75LS8 142 aa9.34□□□□□ -0.91
SMARCA1-202ENST00000371122 SIAH1Q8IUQ4 282 aa9.34□□□□□ -0.91
SMARCA1-202ENST00000371122 SNRNP27Q8WVK2 155 aaKnown RBP9.34□□□□□ -0.91
SMARCA1-202ENST00000371122 CMTM5Q96DZ9 223 aa9.34□□□□□ -0.91
SMARCA1-202ENST00000371122 THUMPD3Q9BV44 507 aaKnown RBP9.34□□□□□ -0.91
SMARCA1-202ENST00000371122 FOXP3Q9BZS1 431 aa9.34□□□□□ -0.91
SMARCA1-202ENST00000371122 ZNF518BQ9C0D4 1074 aa9.34□□□□□ -0.91
SMARCA1-202ENST00000371122 LRRC40Q9H9A6 602 aa9.34□□□□□ -0.91
SMARCA1-202ENST00000371122 SFMBT1Q9UHJ3 866 aa9.34□□□□□ -0.91
SMARCA1-202ENST00000371122 ACOT9Q9Y305 439 aa9.34□□□□□ -0.91
SMARCA1-202ENST00000371122 ZNF268Q14587 947 aaPredicted RBP9.33□□□□□ -0.92
SMARCA1-202ENST00000371122 C15orf52Q6ZUT6 534 aaKnown RBP9.33□□□□□ -0.92
SMARCA1-202ENST00000371122 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.33□□□□□ -0.92
SMARCA1-202ENST00000371122 KLRG1Q96E93 195 aa9.33□□□□□ -0.92
SMARCA1-202ENST00000371122 PGM2Q96G03 612 aa9.33□□□□□ -0.92
SMARCA1-202ENST00000371122 CNDP1Q96KN2 507 aa9.33□□□□□ -0.92
SMARCA1-202ENST00000371122 SEPHS2Q99611 448 aa9.33□□□□□ -0.92
SMARCA1-202ENST00000371122 ABCG8Q9H221 673 aa9.33□□□□□ -0.92
SMARCA1-202ENST00000371122 RXFP1Q9HBX9 757 aa9.33□□□□□ -0.92
SMARCA1-202ENST00000371122 LRRC4CQ9HCJ2 640 aa9.33□□□□□ -0.92
SMARCA1-202ENST00000371122 SLC38A7Q9NVC3 462 aa9.33□□□□□ -0.92
SMARCA1-202ENST00000371122 MPP6Q9NZW5 540 aa9.33□□□□□ -0.92
SMARCA1-202ENST00000371122 STX18Q9P2W9 335 aaKnown RBP9.33□□□□□ -0.92
SMARCA1-202ENST00000371122 NR5A2O00482 541 aa9.33□□□□□ -0.92
SMARCA1-202ENST00000371122 STK25O00506 426 aa9.33□□□□□ -0.92
SMARCA1-202ENST00000371122 DPYSL4O14531 572 aa9.33□□□□□ -0.92
SMARCA1-202ENST00000371122 HCRTO43612 131 aa9.33□□□□□ -0.92
SMARCA1-202ENST00000371122 LSM8O95777 96 aaKnown RBP9.33□□□□□ -0.92
SMARCA1-202ENST00000371122 CYP1A2P05177 515 aa9.33□□□□□ -0.92
SMARCA1-202ENST00000371122 NELFEP18615 380 aaKnown RBP9.33□□□□□ -0.92
SMARCA1-202ENST00000371122 DRD4P21917 467 aa9.33□□□□□ -0.92
SMARCA1-202ENST00000371122 CPT1AP50416 773 aa9.33□□□□□ -0.92
SMARCA1-202ENST00000371122 BST1Q10588 318 aa9.33□□□□□ -0.92
SMARCA1-202ENST00000371122 GTF2H3Q13889 308 aa9.33□□□□□ -0.92
SMARCA1-202ENST00000371122 PDK2Q15119 407 aa9.33□□□□□ -0.92
SMARCA1-202ENST00000371122 UGP2Q16851 508 aa9.33□□□□□ -0.92
SMARCA1-202ENST00000371122 SNX30Q5VWJ9 437 aa9.33□□□□□ -0.92
SMARCA1-202ENST00000371122 CTU1Q7Z7A3 348 aaKnown RBP9.33□□□□□ -0.92
SMARCA1-202ENST00000371122 CARNMT1Q8N4J0 409 aa9.33□□□□□ -0.92
SMARCA1-202ENST00000371122 KCTD17Q8N5Z5 321 aa9.33□□□□□ -0.92
SMARCA1-202ENST00000371122 SAMD3Q8N6K7 520 aa9.33□□□□□ -0.92
SMARCA1-202ENST00000371122 DCBLD1Q8N8Z6 715 aa9.33□□□□□ -0.92
SMARCA1-202ENST00000371122 LRRC57Q8N9N7 239 aa9.33□□□□□ -0.92
SMARCA1-202ENST00000371122 SNX31Q8N9S9 440 aa9.33□□□□□ -0.92
SMARCA1-202ENST00000371122 NMD3Q96D46 503 aaKnown RBP9.33□□□□□ -0.92
SMARCA1-202ENST00000371122 TBCBQ99426 244 aa9.33□□□□□ -0.92
SMARCA1-202ENST00000371122 BRD8Q9H0E9 1235 aa9.33□□□□□ -0.92
SMARCA1-202ENST00000371122 SEMA6AQ9H2E6 1030 aa9.33□□□□□ -0.92
SMARCA1-202ENST00000371122 CATSPERBQ9H7T0 1116 aa9.33□□□□□ -0.92
SMARCA1-202ENST00000371122 NMRK2Q9NPI5 230 aa9.33□□□□□ -0.92
SMARCA1-202ENST00000371122 MAP3K20Q9NYL2 800 aaKnown RBP9.33□□□□□ -0.92
SMARCA1-202ENST00000371122 CDY2AQ9Y6F7 541 aa9.33□□□□□ -0.92
SMARCA1-202ENST00000371122 CDY1Q9Y6F8 540 aa9.33□□□□□ -0.92
SMARCA1-202ENST00000371122 C9JVG2 144 aa9.33□□□□□ -0.92
SMARCA1-202ENST00000371122 APOC4-APOC2K7ER74 178 aa9.33□□□□□ -0.92
SMARCA1-202ENST00000371122 MDM4O15151 490 aa9.33□□□□□ -0.92
SMARCA1-202ENST00000371122 SRP72O76094 671 aaKnown RBP9.33□□□□□ -0.92
SMARCA1-202ENST00000371122 ASS1P00966 412 aaKnown RBP9.33□□□□□ -0.92
SMARCA1-202ENST00000371122 APOC2P02655 101 aa9.33□□□□□ -0.92
SMARCA1-202ENST00000371122 LTFP02788 710 aa9.33□□□□□ -0.92
SMARCA1-202ENST00000371122 ERBB2P04626 1255 aa9.33□□□□□ -0.92
SMARCA1-202ENST00000371122 PBLDP30039 288 aaPredicted RBP9.33□□□□□ -0.92
SMARCA1-202ENST00000371122 ALDH7A1P49419 539 aaKnown RBP9.33□□□□□ -0.92
SMARCA1-202ENST00000371122 SKOR1P84550 965 aa9.33□□□□□ -0.92
SMARCA1-202ENST00000371122 PEX6Q13608 980 aa9.33□□□□□ -0.92
SMARCA1-202ENST00000371122 PTK6Q13882 451 aa9.33□□□□□ -0.92
SMARCA1-202ENST00000371122 SLC1A5Q15758 541 aa9.33□□□□□ -0.92
SMARCA1-202ENST00000371122 SLC39A12Q504Y0 691 aa9.33□□□□□ -0.92
SMARCA1-202ENST00000371122 MILR1Q7Z6M3 343 aa9.33□□□□□ -0.92
SMARCA1-202ENST00000371122 ALYREFQ86V81 257 aaKnown RBP9.33□□□□□ -0.92
SMARCA1-202ENST00000371122 SUGP1Q8IWZ8 645 aaKnown RBP9.33□□□□□ -0.92
SMARCA1-202ENST00000371122 GLIS1Q8NBF1 620 aa9.33□□□□□ -0.92
SMARCA1-202ENST00000371122 CLEC4DQ8WXI8 215 aa9.33□□□□□ -0.92
SMARCA1-202ENST00000371122 KATNAL1Q9BW62 490 aa9.33□□□□□ -0.92
SMARCA1-202ENST00000371122 SIX2Q9NPC8 291 aa9.33□□□□□ -0.92
SMARCA1-202ENST00000371122 OR12D3Q9UGF7 316 aa9.33□□□□□ -0.92
SMARCA1-202ENST00000371122 MSI1O43347 362 aaKnown RBP9.32□□□□□ -0.92
SMARCA1-202ENST00000371122 FARP2O94887 1054 aaPredicted RBP9.32□□□□□ -0.92
SMARCA1-202ENST00000371122 KRT16P08779 473 aa9.32□□□□□ -0.92
SMARCA1-202ENST00000371122 NNMTP40261 264 aa9.32□□□□□ -0.92
SMARCA1-202ENST00000371122 PPP3CCP48454 512 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms