RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 KATNAL1Q9BW62 490 aa16.85■□□□□ 0.29
SH3RF1-201ENST00000284637 SEMA6AQ9H2E6 1030 aa16.85■□□□□ 0.29
SH3RF1-201ENST00000284637 DIABLOQ9NR28 239 aa16.85■□□□□ 0.29
SH3RF1-201ENST00000284637 F8VP50 259 aa16.85■□□□□ 0.29
SH3RF1-201ENST00000284637 ENDOD1O94919 500 aa16.85■□□□□ 0.29
SH3RF1-201ENST00000284637 CALCAP01258 141 aa16.85■□□□□ 0.29
SH3RF1-201ENST00000284637 ME2P23368 584 aa16.85■□□□□ 0.29
SH3RF1-201ENST00000284637 PSMB9P28065 219 aa16.85■□□□□ 0.29
SH3RF1-201ENST00000284637 PKNOX1P55347 436 aa16.85■□□□□ 0.29
SH3RF1-201ENST00000284637 GCNT1Q02742 428 aa16.85■□□□□ 0.29
SH3RF1-201ENST00000284637 VAC14Q08AM6 782 aa16.85■□□□□ 0.29
SH3RF1-201ENST00000284637 FAM13CQ8NE31 585 aa16.85■□□□□ 0.29
SH3RF1-201ENST00000284637 NRDE2Q9H7Z3 1164 aa16.85■□□□□ 0.29
SH3RF1-201ENST00000284637 CROTQ9UKG9 612 aa16.85■□□□□ 0.29
SH3RF1-201ENST00000284637 FAM237AA0A1B0GTK4 181 aa16.85■□□□□ 0.29
SH3RF1-201ENST00000284637 GOLGA8TH3BQL2 631 aa16.85■□□□□ 0.29
SH3RF1-201ENST00000284637 EML1O00423 815 aa16.85■□□□□ 0.29
SH3RF1-201ENST00000284637 PRRG1O14668 218 aa16.85■□□□□ 0.29
SH3RF1-201ENST00000284637 PHGDHO43175 533 aaKnown RBP16.85■□□□□ 0.29
SH3RF1-201ENST00000284637 ALDH1A1P00352 501 aa16.85■□□□□ 0.29
SH3RF1-201ENST00000284637 PGS1Q32NB8 556 aa16.85■□□□□ 0.29
SH3RF1-201ENST00000284637 TTLL9Q3SXZ7 439 aa16.85■□□□□ 0.29
SH3RF1-201ENST00000284637 DHDDSQ86SQ9 333 aa16.85■□□□□ 0.29
SH3RF1-201ENST00000284637 ATP6V0D2Q8N8Y2 350 aa16.85■□□□□ 0.29
SH3RF1-201ENST00000284637 ATG16L2Q8NAA4 619 aa16.85■□□□□ 0.29
SH3RF1-201ENST00000284637 ST13P5Q8NFI4 369 aaPredicted RBP16.85■□□□□ 0.29
SH3RF1-201ENST00000284637 SELENONQ9NZV5 590 aa16.85■□□□□ 0.29
SH3RF1-201ENST00000284637 CIDEBQ9UHD4 219 aa16.85■□□□□ 0.29
SH3RF1-201ENST00000284637 CYB561D2O14569 222 aa16.84■□□□□ 0.29
SH3RF1-201ENST00000284637 CASP5P51878 434 aa16.84■□□□□ 0.29
SH3RF1-201ENST00000284637 CASP7P55210 303 aa16.84■□□□□ 0.29
SH3RF1-201ENST00000284637 PAN2Q504Q3 1202 aaKnown RBP16.84■□□□□ 0.29
SH3RF1-201ENST00000284637 PDCD2LQ9BRP1 358 aa16.84■□□□□ 0.29
SH3RF1-201ENST00000284637 RSL24D1Q9UHA3 163 aaKnown RBP16.84■□□□□ 0.29
SH3RF1-201ENST00000284637 TSPAN16Q9UKR8 245 aa16.84■□□□□ 0.29
SH3RF1-201ENST00000284637 KCNK1O00180 336 aa16.84■□□□□ 0.29
SH3RF1-201ENST00000284637 ST8SIA6P61647 398 aa16.84■□□□□ 0.29
SH3RF1-201ENST00000284637 OTOP1Q7RTM1 612 aa16.84■□□□□ 0.29
SH3RF1-201ENST00000284637 LUZP2Q86TE4 346 aa16.84■□□□□ 0.29
SH3RF1-201ENST00000284637 TSPAN14Q8NG11 270 aa16.84■□□□□ 0.29
SH3RF1-201ENST00000284637 DMTF1Q9Y222 760 aa16.84■□□□□ 0.29
SH3RF1-201ENST00000284637 AGPSO00116 658 aa16.84■□□□□ 0.29
SH3RF1-201ENST00000284637 FCGR1AP12314 374 aa16.84■□□□□ 0.29
SH3RF1-201ENST00000284637 AMPD1P23109 780 aa16.84■□□□□ 0.29
SH3RF1-201ENST00000284637 MRPS22P82650 360 aaKnown RBP16.84■□□□□ 0.29
SH3RF1-201ENST00000284637 BNIP1Q12981 228 aa16.84■□□□□ 0.29
SH3RF1-201ENST00000284637 ADGRF2Q8IZF7 708 aa16.84■□□□□ 0.29
SH3RF1-201ENST00000284637 SYTL5Q8TDW5 730 aaPredicted RBP16.84■□□□□ 0.29
SH3RF1-201ENST00000284637 NT5MQ9NPB1 228 aa16.84■□□□□ 0.29
SH3RF1-201ENST00000284637 CCDC167Q9P0B6 97 aa16.84■□□□□ 0.29
SH3RF1-201ENST00000284637 DRG1Q9Y295 367 aaKnown RBP16.84■□□□□ 0.29
SH3RF1-201ENST00000284637 FAM237BA0A1B0GVD1 139 aa16.84■□□□□ 0.29
SH3RF1-201ENST00000284637 DDHD2O94830 711 aa16.84■□□□□ 0.29
SH3RF1-201ENST00000284637 VEGFAP15692 232 aaPredicted RBP16.84■□□□□ 0.29
SH3RF1-201ENST00000284637 SOX6P35712 828 aa16.84■□□□□ 0.29
SH3RF1-201ENST00000284637 RAD23AP54725 363 aa16.84■□□□□ 0.29
SH3RF1-201ENST00000284637 USP46P62068 366 aa16.84■□□□□ 0.29
SH3RF1-201ENST00000284637 FASTKQ14296 549 aaKnown RBP16.84■□□□□ 0.29
SH3RF1-201ENST00000284637 PPP1R15BQ5SWA1 713 aa16.84■□□□□ 0.29
SH3RF1-201ENST00000284637 CEP44Q9C0F1 390 aa16.84■□□□□ 0.29
SH3RF1-201ENST00000284637 SESN1Q9Y6P5 492 aa16.84■□□□□ 0.29
SH3RF1-201ENST00000284637 PLA2G6O60733 806 aa16.83■□□□□ 0.29
SH3RF1-201ENST00000284637 CPSF4O95639 269 aaKnown RBP16.83■□□□□ 0.29
SH3RF1-201ENST00000284637 ALADP13716 330 aa16.83■□□□□ 0.29
SH3RF1-201ENST00000284637 NR6A1Q15406 480 aa16.83■□□□□ 0.29
SH3RF1-201ENST00000284637 MAPK11Q15759 364 aa16.83■□□□□ 0.29
SH3RF1-201ENST00000284637 CCDC153Q494R4 210 aa16.83■□□□□ 0.29
SH3RF1-201ENST00000284637 TBC1D19Q8N5T2 526 aa16.83■□□□□ 0.29
SH3RF1-201ENST00000284637 MPP6Q9NZW5 540 aa16.83■□□□□ 0.29
SH3RF1-201ENST00000284637 ZNF180Q9UJW8 692 aa16.83■□□□□ 0.29
SH3RF1-201ENST00000284637 TMX2Q9Y320 296 aa16.83■□□□□ 0.29
SH3RF1-201ENST00000284637 NRXN1Q9ULB1 1477 aa16.83■□□□□ 0.29
SH3RF1-201ENST00000284637 PIAS1O75925 651 aa16.83■□□□□ 0.29
SH3RF1-201ENST00000284637 MPOP05164 745 aa16.83■□□□□ 0.29
SH3RF1-201ENST00000284637 SLC2A3P11169 496 aa16.83■□□□□ 0.29
SH3RF1-201ENST00000284637 CDH8P55286 799 aa16.83■□□□□ 0.29
SH3RF1-201ENST00000284637 XIAPP98170 497 aa16.83■□□□□ 0.29
SH3RF1-201ENST00000284637 ARHGAP17Q68EM7 881 aa16.83■□□□□ 0.29
SH3RF1-201ENST00000284637 KCNMB4Q86W47 210 aa16.83■□□□□ 0.29
SH3RF1-201ENST00000284637 OR8H2Q8N162 312 aa16.83■□□□□ 0.29
SH3RF1-201ENST00000284637 HTR3CQ8WXA8 447 aa16.83■□□□□ 0.29
SH3RF1-201ENST00000284637 VCPIP1Q96JH7 1222 aa16.83■□□□□ 0.29
SH3RF1-201ENST00000284637 RMND5AQ9H871 391 aa16.83■□□□□ 0.29
SH3RF1-201ENST00000284637 RRN3P2A6NIE6 340 aa16.83■□□□□ 0.28
SH3RF1-201ENST00000284637 MRASO14807 208 aa16.83■□□□□ 0.28
SH3RF1-201ENST00000284637 SPTLC1O15269 473 aa16.83■□□□□ 0.28
SH3RF1-201ENST00000284637 PEX1O43933 1283 aa16.83■□□□□ 0.28
SH3RF1-201ENST00000284637 SLC12A3P55017 1021 aa16.83■□□□□ 0.28
SH3RF1-201ENST00000284637 CDC16Q13042 620 aa16.83■□□□□ 0.28
SH3RF1-201ENST00000284637 ARMCX4Q5H9R4 360 aa16.83■□□□□ 0.28
SH3RF1-201ENST00000284637 AVENQ9NQS1 362 aaPredicted RBP16.83■□□□□ 0.28
SH3RF1-201ENST00000284637 PXMP2Q9NR77 195 aa16.83■□□□□ 0.28
SH3RF1-201ENST00000284637 RBM22Q9NW64 420 aaKnown RBP eCLIP16.83■□□□□ 0.28
SH3RF1-201ENST00000284637 TPBGLP0DKB5 382 aa16.83■□□□□ 0.28
SH3RF1-201ENST00000284637 MARCKSL1P49006 195 aa16.83■□□□□ 0.28
SH3RF1-201ENST00000284637 GMPSP49915 693 aaPredicted RBP16.83■□□□□ 0.28
SH3RF1-201ENST00000284637 DLG4P78352 724 aa16.83■□□□□ 0.28
SH3RF1-201ENST00000284637 TIGD7Q6NT04 549 aaPredicted RBP16.83■□□□□ 0.28
SH3RF1-201ENST00000284637 GMCL1P1Q8NEA9 526 aa16.83■□□□□ 0.28
SH3RF1-201ENST00000284637 FIG4Q92562 907 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms