RNA–Protein interactions for RNA: ENST00000611412.4

VPS45-212, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 5 BASIC

Gene VPS45, Length 2,064 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-212ENST00000611412 CMTM8Q8IZV2 173 aa12.38□□□□□ -0.43
VPS45-212ENST00000611412 ZNF276Q8N554 614 aa12.38□□□□□ -0.43
VPS45-212ENST00000611412 MTMR10Q9NXD2 777 aa12.38□□□□□ -0.43
VPS45-212ENST00000611412 CLUHO75153 1309 aa12.38□□□□□ -0.43
VPS45-212ENST00000611412 GOLGA6L7A0A1B0GV03 622 aa12.38□□□□□ -0.43
VPS45-212ENST00000611412 CCDC66A2RUB6 948 aa12.38□□□□□ -0.43
VPS45-212ENST00000611412 LRRD1A4D1F6 860 aa12.38□□□□□ -0.43
VPS45-212ENST00000611412 MIF4GDA9UHW6 222 aaKnown RBP12.38□□□□□ -0.43
VPS45-212ENST00000611412 FAM72CH0Y354 149 aa12.38□□□□□ -0.43
VPS45-212ENST00000611412 PAGE1O75459 146 aa12.38□□□□□ -0.43
VPS45-212ENST00000611412 STC2O76061 302 aa12.38□□□□□ -0.43
VPS45-212ENST00000611412 KRT7P08729 469 aa12.38□□□□□ -0.43
VPS45-212ENST00000611412 PYGMP11217 842 aa12.38□□□□□ -0.43
VPS45-212ENST00000611412 RWDD2BP57060 319 aa12.38□□□□□ -0.43
VPS45-212ENST00000611412 ITIH3Q06033 890 aa12.38□□□□□ -0.43
VPS45-212ENST00000611412 MMRN1Q13201 1228 aa12.38□□□□□ -0.43
VPS45-212ENST00000611412 FAM72AQ5TYM5 149 aa12.38□□□□□ -0.43
VPS45-212ENST00000611412 FAM72DQ6L9T8 149 aa12.38□□□□□ -0.43
VPS45-212ENST00000611412 KLHDC10Q6PID8 442 aa12.38□□□□□ -0.43
VPS45-212ENST00000611412 FAM72BQ86X60 149 aa12.38□□□□□ -0.43
VPS45-212ENST00000611412 CCDC50Q8IVM0 306 aa12.38□□□□□ -0.43
VPS45-212ENST00000611412 NPAS3Q8IXF0 933 aa12.38□□□□□ -0.43
VPS45-212ENST00000611412 KCTD6Q8NC69 237 aa12.38□□□□□ -0.43
VPS45-212ENST00000611412 RIN3Q8TB24 985 aa12.38□□□□□ -0.43
VPS45-212ENST00000611412 ADAMTS19Q8TE59 1207 aa12.38□□□□□ -0.43
VPS45-212ENST00000611412 COG1Q8WTW3 980 aa12.38□□□□□ -0.43
VPS45-212ENST00000611412 FGF13Q92913 245 aa12.38□□□□□ -0.43
VPS45-212ENST00000611412 CAPZA3Q96KX2 299 aa12.38□□□□□ -0.43
VPS45-212ENST00000611412 KCTD15Q96SI1 283 aaPredicted RBP12.38□□□□□ -0.43
VPS45-212ENST00000611412 OSBPL9Q96SU4 736 aa12.38□□□□□ -0.43
VPS45-212ENST00000611412 POMKQ9H5K3 350 aa12.38□□□□□ -0.43
VPS45-212ENST00000611412 RRAGDQ9NQL2 400 aaPredicted RBP12.38□□□□□ -0.43
VPS45-212ENST00000611412 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.38□□□□□ -0.43
VPS45-212ENST00000611412 ARHGEF38Q9NXL2 777 aa12.38□□□□□ -0.43
VPS45-212ENST00000611412 SMARCAL1Q9NZC9 954 aa12.38□□□□□ -0.43
VPS45-212ENST00000611412 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.38□□□□□ -0.43
VPS45-212ENST00000611412 UNC80Q8N2C7 3258 aa12.37□□□□□ -0.43
VPS45-212ENST00000611412 KCNU1A8MYU2 1149 aa12.37□□□□□ -0.43
VPS45-212ENST00000611412 KIF2AO00139 706 aaPredicted RBP12.37□□□□□ -0.43
VPS45-212ENST00000611412 URI1O94763 535 aaPredicted RBP12.37□□□□□ -0.43
VPS45-212ENST00000611412 IGLV3-27P01718 113 aa12.37□□□□□ -0.43
VPS45-212ENST00000611412 APOEP02649 317 aa12.37□□□□□ -0.43
VPS45-212ENST00000611412 KLKB1P03952 638 aa12.37□□□□□ -0.43
VPS45-212ENST00000611412 CORO1AP31146 461 aaKnown RBP12.37□□□□□ -0.43
VPS45-212ENST00000611412 CDH6P55285 790 aa12.37□□□□□ -0.43
VPS45-212ENST00000611412 COG7P83436 770 aa12.37□□□□□ -0.43
VPS45-212ENST00000611412 KRT81Q14533 505 aa12.37□□□□□ -0.43
VPS45-212ENST00000611412 COL19A1Q14993 1142 aa12.37□□□□□ -0.43
VPS45-212ENST00000611412 ARL13BQ3SXY8 428 aa12.37□□□□□ -0.43
VPS45-212ENST00000611412 BOLA3Q53S33 107 aa12.37□□□□□ -0.43
VPS45-212ENST00000611412 ODF2Q5BJF6 829 aa12.37□□□□□ -0.43
VPS45-212ENST00000611412 EFHC2Q5JST6 749 aa12.37□□□□□ -0.43
VPS45-212ENST00000611412 GPR153Q6NV75 609 aa12.37□□□□□ -0.43
VPS45-212ENST00000611412 MFSD7Q6UXD7 560 aa12.37□□□□□ -0.43
VPS45-212ENST00000611412 DENND1CQ8IV53 801 aa12.37□□□□□ -0.43
VPS45-212ENST00000611412 ZSCAN18Q8TBC5 510 aaPredicted RBP12.37□□□□□ -0.43
VPS45-212ENST00000611412 USP13Q92995 863 aaPredicted RBP12.37□□□□□ -0.43
VPS45-212ENST00000611412 MS4A14Q96JA4 679 aa12.37□□□□□ -0.43
VPS45-212ENST00000611412 CALN1Q9BXU9 219 aa12.37□□□□□ -0.43
VPS45-212ENST00000611412 CFAP97Q9P2B7 532 aa12.37□□□□□ -0.43
VPS45-212ENST00000611412 SNX12Q9UMY4 172 aa12.37□□□□□ -0.43
VPS45-212ENST00000611412 HBS1LQ9Y450 684 aaKnown RBP12.37□□□□□ -0.43
VPS45-212ENST00000611412 LEFTY2O00292 366 aa12.36□□□□□ -0.43
VPS45-212ENST00000611412 TRDMT1O14717 391 aaKnown RBP12.36□□□□□ -0.43
VPS45-212ENST00000611412 CREB3O43889 395 aa12.36□□□□□ -0.43
VPS45-212ENST00000611412 KDELR1P24390 212 aa12.36□□□□□ -0.43
VPS45-212ENST00000611412 DDX6P26196 483 aaKnown RBP eCLIP12.36□□□□□ -0.43
VPS45-212ENST00000611412 SLC7A9P82251 487 aa12.36□□□□□ -0.43
VPS45-212ENST00000611412 PPP2R5DQ14738 602 aa12.36□□□□□ -0.43
VPS45-212ENST00000611412 BRMS1LQ5PSV4 323 aa12.36□□□□□ -0.43
VPS45-212ENST00000611412 LRRC38Q5VT99 294 aa12.36□□□□□ -0.43
VPS45-212ENST00000611412 PAPD7Q5XG87 772 aaKnown RBP12.36□□□□□ -0.43
VPS45-212ENST00000611412 KAZNQ674X7 775 aa12.36□□□□□ -0.43
VPS45-212ENST00000611412 RAP1GAP2Q684P5 730 aa12.36□□□□□ -0.43
VPS45-212ENST00000611412 POLNQ7Z5Q5 900 aa12.36□□□□□ -0.43
VPS45-212ENST00000611412 ARID3BQ8IVW6 561 aaPredicted RBP12.36□□□□□ -0.43
VPS45-212ENST00000611412 KATNAL2Q8IYT4 538 aa12.36□□□□□ -0.43
VPS45-212ENST00000611412 KIF18AQ8NI77 898 aa12.36□□□□□ -0.43
VPS45-212ENST00000611412 SH3RF2Q8TEC5 729 aa12.36□□□□□ -0.43
VPS45-212ENST00000611412 NCAPGQ9BPX3 1015 aa12.36□□□□□ -0.43
VPS45-212ENST00000611412 HERPUD2Q9BSE4 406 aa12.36□□□□□ -0.43
VPS45-212ENST00000611412 HEMGNQ9BXL5 484 aa12.36□□□□□ -0.43
VPS45-212ENST00000611412 UBE2ZQ9H832 354 aaPredicted RBP12.36□□□□□ -0.43
VPS45-212ENST00000611412 PCDH18Q9HCL0 1135 aa12.36□□□□□ -0.43
VPS45-212ENST00000611412 CD207Q9UJ71 328 aa12.36□□□□□ -0.43
VPS45-212ENST00000611412 HS3ST4Q9Y661 456 aa12.36□□□□□ -0.43
VPS45-212ENST00000611412 CEP104O60308 925 aa12.36□□□□□ -0.43
VPS45-212ENST00000611412 ZRANB2O95218 330 aaKnown RBP eCLIP12.36□□□□□ -0.43
VPS45-212ENST00000611412 KRT10P13645 584 aa12.36□□□□□ -0.43
VPS45-212ENST00000611412 L1CAMP32004 1257 aa12.36□□□□□ -0.43
VPS45-212ENST00000611412 GBP2P32456 591 aaPredicted RBP12.36□□□□□ -0.43
VPS45-212ENST00000611412 VIPR2P41587 438 aa12.36□□□□□ -0.43
VPS45-212ENST00000611412 HARS2P49590 506 aaKnown RBP12.36□□□□□ -0.43
VPS45-212ENST00000611412 AMPD2Q01433 879 aa12.36□□□□□ -0.43
VPS45-212ENST00000611412 NNTQ13423 1086 aa12.36□□□□□ -0.43
VPS45-212ENST00000611412 PIK3R6Q5UE93 754 aa12.36□□□□□ -0.43
VPS45-212ENST00000611412 ADAT2Q7Z6V5 191 aaKnown RBP12.36□□□□□ -0.43
VPS45-212ENST00000611412 C14orf80Q86SX3 495 aa12.36□□□□□ -0.43
VPS45-212ENST00000611412 ATP6V0D2Q8N8Y2 350 aa12.36□□□□□ -0.43
VPS45-212ENST00000611412 SMRP1Q8NCR6 262 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms