RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 BANPQ8N9N5 519 aa15.02■□□□□ -0
VPS36-207ENST00000611132 HTR3CQ8WXA8 447 aa15.02■□□□□ -0
VPS36-207ENST00000611132 IFT43Q96FT9 208 aa15.02■□□□□ -0
VPS36-207ENST00000611132 ITGA11Q9UKX5 1188 aa15.02■□□□□ -0
VPS36-207ENST00000611132 DUOX1Q9NRD9 1551 aa15.02■□□□□ -0
VPS36-207ENST00000611132 KANSL1LA0AUZ9 987 aa15.02■□□□□ -0
VPS36-207ENST00000611132 AVILO75366 819 aa15.02■□□□□ -0
VPS36-207ENST00000611132 LYPLA1O75608 230 aaPredicted RBP15.02■□□□□ -0
VPS36-207ENST00000611132 BCL10O95999 233 aa15.02■□□□□ -0
VPS36-207ENST00000611132 MMP8P22894 467 aa15.02■□□□□ -0
VPS36-207ENST00000611132 GABRB2P47870 512 aa15.02■□□□□ -0
VPS36-207ENST00000611132 PRKAA2P54646 552 aa15.02■□□□□ -0
VPS36-207ENST00000611132 POU5F1Q01860 360 aaKnown RBP15.02■□□□□ -0
VPS36-207ENST00000611132 AGAP9Q5VTM2 703 aa15.02■□□□□ -0
VPS36-207ENST00000611132 FRA10AC1Q70Z53 315 aa15.02■□□□□ -0
VPS36-207ENST00000611132 DHFR2Q86XF0 187 aa15.02■□□□□ -0
VPS36-207ENST00000611132 TTLL6Q8N841 843 aa15.02■□□□□ -0
VPS36-207ENST00000611132 ZFAND2BQ8WV99 257 aa15.02■□□□□ -0
VPS36-207ENST00000611132 FAM84AQ96KN4 292 aa15.02■□□□□ -0
VPS36-207ENST00000611132 PLGRKTQ9HBL7 147 aa15.02■□□□□ -0
VPS36-207ENST00000611132 NMRAL1Q9HBL8 299 aa15.02■□□□□ -0
VPS36-207ENST00000611132 RSL24D1Q9UHA3 163 aaKnown RBP15.02■□□□□ -0
VPS36-207ENST00000611132 CROTQ9UKG9 612 aa15.02■□□□□ -0
VPS36-207ENST00000611132 RGSL1A5PLK6 1076 aa15.02□□□□□ -0.01
VPS36-207ENST00000611132 LINGO3P0C6S8 592 aa15.02□□□□□ -0.01
VPS36-207ENST00000611132 EGFL6Q8IUX8 553 aa15.02□□□□□ -0.01
VPS36-207ENST00000611132 ENDOVQ8N8Q3 282 aaKnown RBP15.02□□□□□ -0.01
VPS36-207ENST00000611132 CASP10Q92851 521 aa15.02□□□□□ -0.01
VPS36-207ENST00000611132 APOL2Q9BQE5 337 aa15.02□□□□□ -0.01
VPS36-207ENST00000611132 IDI2Q9BXS1 227 aa15.02□□□□□ -0.01
VPS36-207ENST00000611132 RNPEPQ9H4A4 650 aa15.02□□□□□ -0.01
VPS36-207ENST00000611132 CHST12Q9NRB3 414 aa15.02□□□□□ -0.01
VPS36-207ENST00000611132 EFR3BQ9Y2G0 817 aa15.02□□□□□ -0.01
VPS36-207ENST00000611132 TOMM70O94826 608 aa15.02□□□□□ -0.01
VPS36-207ENST00000611132 PIGNO95427 931 aa15.02□□□□□ -0.01
VPS36-207ENST00000611132 HADHAP40939 763 aa15.02□□□□□ -0.01
VPS36-207ENST00000611132 CAPRIN1Q14444 709 aaKnown RBP15.02□□□□□ -0.01
VPS36-207ENST00000611132 FNBP1LQ5T0N5 605 aa15.02□□□□□ -0.01
VPS36-207ENST00000611132 MON1BQ7L1V2 547 aa15.02□□□□□ -0.01
VPS36-207ENST00000611132 EBNA1BP2Q99848 306 aaKnown RBP15.02□□□□□ -0.01
VPS36-207ENST00000611132 KLHL25Q9H0H3 589 aa15.02□□□□□ -0.01
VPS36-207ENST00000611132 CYP4F12Q9HCS2 524 aa15.02□□□□□ -0.01
VPS36-207ENST00000611132 VANGL2Q9ULK5 521 aa15.02□□□□□ -0.01
VPS36-207ENST00000611132 PRPF19Q9UMS4 504 aaKnown RBP15.02□□□□□ -0.01
VPS36-207ENST00000611132 NALCNQ8IZF0 1738 aa15.02□□□□□ -0.01
VPS36-207ENST00000611132 SLURP2P0DP57 97 aa15.01□□□□□ -0.01
VPS36-207ENST00000611132 RARBP10826 455 aa15.01□□□□□ -0.01
VPS36-207ENST00000611132 CES3Q6UWW8 571 aa15.01□□□□□ -0.01
VPS36-207ENST00000611132 ACOT1Q86TX2 421 aa15.01□□□□□ -0.01
VPS36-207ENST00000611132 FAM131BQ86XD5 332 aa15.01□□□□□ -0.01
VPS36-207ENST00000611132 MAN1C1Q9NR34 630 aa15.01□□□□□ -0.01
VPS36-207ENST00000611132 CLUHO75153 1309 aa15.01□□□□□ -0.01
VPS36-207ENST00000611132 C1orf232A0A0U1RR37 186 aa15.01□□□□□ -0.01
VPS36-207ENST00000611132 GAS2O43903 313 aaKnown RBP15.01□□□□□ -0.01
VPS36-207ENST00000611132 FCGR1AP12314 374 aa15.01□□□□□ -0.01
VPS36-207ENST00000611132 ACAT1P24752 427 aaKnown RBP15.01□□□□□ -0.01
VPS36-207ENST00000611132 NR2C2P49116 596 aa15.01□□□□□ -0.01
VPS36-207ENST00000611132 RPL14P50914 215 aaKnown RBP15.01□□□□□ -0.01
VPS36-207ENST00000611132 ACTR3P61158 418 aa15.01□□□□□ -0.01
VPS36-207ENST00000611132 ATPAF2Q8N5M1 289 aa15.01□□□□□ -0.01
VPS36-207ENST00000611132 EBF3Q9H4W6 596 aa15.01□□□□□ -0.01
VPS36-207ENST00000611132 RGPD8O14715 1765 aaPredicted RBP15.01□□□□□ -0.01
VPS36-207ENST00000611132 MLH1P40692 756 aa15.01□□□□□ -0.01
VPS36-207ENST00000611132 MPP2Q14168 576 aa15.01□□□□□ -0.01
VPS36-207ENST00000611132 TTLL4Q14679 1199 aa15.01□□□□□ -0.01
VPS36-207ENST00000611132 TMC7Q7Z402 723 aa15.01□□□□□ -0.01
VPS36-207ENST00000611132 HPS6Q86YV9 775 aa15.01□□□□□ -0.01
VPS36-207ENST00000611132 DCUN1D1Q96GG9 259 aa15.01□□□□□ -0.01
VPS36-207ENST00000611132 KIF17Q9P2E2 1029 aa15.01□□□□□ -0.01
VPS36-207ENST00000611132 FETUBQ9UGM5 382 aa15.01□□□□□ -0.01
VPS36-207ENST00000611132 ZNF839A8K0R7 811 aa15.01□□□□□ -0.01
VPS36-207ENST00000611132 ITGB5P18084 799 aa15.01□□□□□ -0.01
VPS36-207ENST00000611132 CDH8P55286 799 aa15.01□□□□□ -0.01
VPS36-207ENST00000611132 SPANXN3Q5MJ09 141 aa15.01□□□□□ -0.01
VPS36-207ENST00000611132 DRICH1Q6PGQ1 229 aaPredicted RBP15.01□□□□□ -0.01
VPS36-207ENST00000611132 SLC7A14Q8TBB6 771 aa15.01□□□□□ -0.01
VPS36-207ENST00000611132 BTBD9Q96Q07 612 aa15.01□□□□□ -0.01
VPS36-207ENST00000611132 BCAS3Q9H6U6 928 aa15.01□□□□□ -0.01
VPS36-207ENST00000611132 TIMMDC1Q9NPL8 285 aa15.01□□□□□ -0.01
VPS36-207ENST00000611132 SCHIP1Q9P0W5 487 aaPredicted RBP15.01□□□□□ -0.01
VPS36-207ENST00000611132 SNCAIPQ9Y6H5 919 aa15.01□□□□□ -0.01
VPS36-207ENST00000611132 MRASO14807 208 aa15□□□□□ -0.01
VPS36-207ENST00000611132 MAP3K13O43283 966 aa15□□□□□ -0.01
VPS36-207ENST00000611132 KRT75O95678 551 aa15□□□□□ -0.01
VPS36-207ENST00000611132 TTKP33981 857 aa15□□□□□ -0.01
VPS36-207ENST00000611132 USP46P62068 366 aa15□□□□□ -0.01
VPS36-207ENST00000611132 IMPG1Q17R60 797 aa15□□□□□ -0.01
VPS36-207ENST00000611132 SAMD4BQ5PRF9 694 aaKnown RBP15□□□□□ -0.01
VPS36-207ENST00000611132 ANKRD22Q5VYY1 191 aa15□□□□□ -0.01
VPS36-207ENST00000611132 ZPBP2Q6X784 338 aa15□□□□□ -0.01
VPS36-207ENST00000611132 ZC3H3Q8IXZ2 948 aaKnown RBP15□□□□□ -0.01
VPS36-207ENST00000611132 TUBGCP3Q96CW5 907 aa15□□□□□ -0.01
VPS36-207ENST00000611132 RNF157Q96PX1 679 aa15□□□□□ -0.01
VPS36-207ENST00000611132 CEP41Q9BYV8 373 aa15□□□□□ -0.01
VPS36-207ENST00000611132 PRKAG3Q9UGI9 489 aa15□□□□□ -0.01
VPS36-207ENST00000611132 CDH22Q9UJ99 828 aa15□□□□□ -0.01
VPS36-207ENST00000611132 PLA2G4CQ9UP65 541 aa15□□□□□ -0.01
VPS36-207ENST00000611132 SPATA31A5Q5VU36 1347 aa15□□□□□ -0.01
VPS36-207ENST00000611132 SPATA31A7Q8IWB4 1347 aa15□□□□□ -0.01
VPS36-207ENST00000611132 MICAL2O94851 1124 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms