RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 OVOS1Q6IE37 1185 aa18.74■□□□□ 0.59
SMPD3-211ENST00000568373 RFX8Q6ZV50 586 aa18.74■□□□□ 0.59
SMPD3-211ENST00000568373 OR10T2Q8NGX3 314 aa18.74■□□□□ 0.59
SMPD3-211ENST00000568373 GDAP1Q8TB36 358 aa18.74■□□□□ 0.59
SMPD3-211ENST00000568373 CD99L2Q8TCZ2 262 aa18.74■□□□□ 0.59
SMPD3-211ENST00000568373 IRGQQ8WZA9 623 aa18.74■□□□□ 0.59
SMPD3-211ENST00000568373 SUSD3Q96L08 255 aa18.74■□□□□ 0.59
SMPD3-211ENST00000568373 LGMNQ99538 433 aa18.74■□□□□ 0.59
SMPD3-211ENST00000568373 DMAP1Q9NPF5 467 aaPredicted RBP18.74■□□□□ 0.59
SMPD3-211ENST00000568373 RGS18Q9NS28 235 aa18.74■□□□□ 0.59
SMPD3-211ENST00000568373 TMLHEQ9NVH6 421 aa18.74■□□□□ 0.59
SMPD3-211ENST00000568373 FBXW11Q9UKB1 542 aa18.74■□□□□ 0.59
SMPD3-211ENST00000568373 SMG5Q9UPR3 1016 aaKnown RBP18.74■□□□□ 0.59
SMPD3-211ENST00000568373 ARHGEF37A1IGU5 675 aa18.73■□□□□ 0.59
SMPD3-211ENST00000568373 TCP11X1B4DZS4 312 aa18.73■□□□□ 0.59
SMPD3-211ENST00000568373 SPAG7O75391 227 aa18.73■□□□□ 0.59
SMPD3-211ENST00000568373 PIAS1O75925 651 aa18.73■□□□□ 0.59
SMPD3-211ENST00000568373 YWHAGP61981 247 aaKnown RBP eCLIP18.73■□□□□ 0.59
SMPD3-211ENST00000568373 PAFAH1B3Q15102 231 aaKnown RBP18.73■□□□□ 0.59
SMPD3-211ENST00000568373 PRKD1Q15139 912 aaPredicted RBP18.73■□□□□ 0.59
SMPD3-211ENST00000568373 PM20D1Q6GTS8 502 aa18.73■□□□□ 0.59
SMPD3-211ENST00000568373 TRAF7Q6Q0C0 670 aa18.73■□□□□ 0.59
SMPD3-211ENST00000568373 DCAKDQ8WVC6 231 aa18.73■□□□□ 0.59
SMPD3-211ENST00000568373 TRPV6Q9H1D0 765 aa18.73■□□□□ 0.59
SMPD3-211ENST00000568373 DDIT4Q9NX09 232 aa18.73■□□□□ 0.59
SMPD3-211ENST00000568373 FRMPD3Q5JV73 1810 aa18.73■□□□□ 0.59
SMPD3-211ENST00000568373 PTPRDP23468 1912 aa18.73■□□□□ 0.59
SMPD3-211ENST00000568373 A0A0A0MRY4 1105 aa18.73■□□□□ 0.59
SMPD3-211ENST00000568373 MAGEA3P43357 314 aa18.73■□□□□ 0.59
SMPD3-211ENST00000568373 SEMA3BQ13214 749 aa18.73■□□□□ 0.59
SMPD3-211ENST00000568373 SEMA5AQ13591 1074 aa18.73■□□□□ 0.59
SMPD3-211ENST00000568373 PDK1Q15118 436 aa18.73■□□□□ 0.59
SMPD3-211ENST00000568373 MAPRE1Q15691 268 aaKnown RBP18.73■□□□□ 0.59
SMPD3-211ENST00000568373 LRRTM3Q86VH5 581 aa18.73■□□□□ 0.59
SMPD3-211ENST00000568373 C4orf33Q8N1A6 199 aa18.73■□□□□ 0.59
SMPD3-211ENST00000568373 THEM5Q8N1Q8 247 aa18.73■□□□□ 0.59
SMPD3-211ENST00000568373 OTUD6BQ8N6M0 293 aa18.73■□□□□ 0.59
SMPD3-211ENST00000568373 CCDC197Q8NCU1 140 aa18.73■□□□□ 0.59
SMPD3-211ENST00000568373 RAET1EQ8TD07 263 aa18.73■□□□□ 0.59
SMPD3-211ENST00000568373 LRRC39Q96DD0 335 aa18.73■□□□□ 0.59
SMPD3-211ENST00000568373 SPATA13Q96N96 652 aa18.73■□□□□ 0.59
SMPD3-211ENST00000568373 PNPLA8Q9NP80 782 aa18.73■□□□□ 0.59
SMPD3-211ENST00000568373 ANLNQ9NQW6 1124 aa18.73■□□□□ 0.59
SMPD3-211ENST00000568373 SAMD15Q9P1V8 674 aa18.73■□□□□ 0.59
SMPD3-211ENST00000568373 A0A1W2PPM1 405 aa18.72■□□□□ 0.59
SMPD3-211ENST00000568373 F8W810 466 aa18.72■□□□□ 0.59
SMPD3-211ENST00000568373 I6L893 689 aaPredicted RBP18.72■□□□□ 0.59
SMPD3-211ENST00000568373 DCLK1O15075 740 aa18.72■□□□□ 0.59
SMPD3-211ENST00000568373 EOMESO95936 686 aa18.72■□□□□ 0.59
SMPD3-211ENST00000568373 F9P00740 461 aa18.72■□□□□ 0.59
SMPD3-211ENST00000568373 TYMPP19971 482 aa18.72■□□□□ 0.59
SMPD3-211ENST00000568373 WDR4P57081 412 aaKnown RBP18.72■□□□□ 0.59
SMPD3-211ENST00000568373 MBTPS1Q14703 1052 aa18.72■□□□□ 0.59
SMPD3-211ENST00000568373 ANKRD20A2Q5SQ80 823 aa18.72■□□□□ 0.59
SMPD3-211ENST00000568373 ANKRD20A1Q5TYW2 823 aa18.72■□□□□ 0.59
SMPD3-211ENST00000568373 ANKRD20A3Q5VUR7 823 aa18.72■□□□□ 0.59
SMPD3-211ENST00000568373 GLB1LQ6UWU2 654 aa18.72■□□□□ 0.59
SMPD3-211ENST00000568373 RTN4RL1Q86UN2 441 aaPredicted RBP18.72■□□□□ 0.59
SMPD3-211ENST00000568373 SCML4Q8N228 414 aa18.72■□□□□ 0.59
SMPD3-211ENST00000568373 DENND1AQ8TEH3 1009 aa18.72■□□□□ 0.59
SMPD3-211ENST00000568373 EDEM1Q92611 657 aa18.72■□□□□ 0.59
SMPD3-211ENST00000568373 MAGEB18Q96M61 343 aa18.72■□□□□ 0.59
SMPD3-211ENST00000568373 TMEM209Q96SK2 561 aa18.72■□□□□ 0.59
SMPD3-211ENST00000568373 COLEC11Q9BWP8 271 aa18.72■□□□□ 0.59
SMPD3-211ENST00000568373 CFHR5Q9BXR6 569 aa18.72■□□□□ 0.59
SMPD3-211ENST00000568373 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.72■□□□□ 0.59
SMPD3-211ENST00000568373 NR2E3Q9Y5X4 410 aa18.72■□□□□ 0.59
SMPD3-211ENST00000568373 COL4A4P53420 1690 aaPredicted RBP18.72■□□□□ 0.59
SMPD3-211ENST00000568373 FAM72CH0Y354 149 aa18.72■□□□□ 0.59
SMPD3-211ENST00000568373 TRIM66O15016 1216 aa18.72■□□□□ 0.59
SMPD3-211ENST00000568373 TRPA1O75762 1119 aa18.72■□□□□ 0.59
SMPD3-211ENST00000568373 GLUD2P49448 558 aa18.72■□□□□ 0.59
SMPD3-211ENST00000568373 IL9RQ01113 521 aa18.72■□□□□ 0.59
SMPD3-211ENST00000568373 TSPY1Q01534 308 aa18.72■□□□□ 0.59
SMPD3-211ENST00000568373 ARL13BQ3SXY8 428 aa18.72■□□□□ 0.59
SMPD3-211ENST00000568373 KBTBD12Q3ZCT8 623 aa18.72■□□□□ 0.59
SMPD3-211ENST00000568373 FAM72AQ5TYM5 149 aa18.72■□□□□ 0.59
SMPD3-211ENST00000568373 FAM72DQ6L9T8 149 aa18.72■□□□□ 0.59
SMPD3-211ENST00000568373 SLC24A5Q71RS6 500 aa18.72■□□□□ 0.59
SMPD3-211ENST00000568373 ZNF534Q76KX8 674 aa18.72■□□□□ 0.59
SMPD3-211ENST00000568373 FAM72BQ86X60 149 aa18.72■□□□□ 0.59
SMPD3-211ENST00000568373 PXYLP1Q8TE99 480 aa18.72■□□□□ 0.59
SMPD3-211ENST00000568373 MZB1Q8WU39 189 aa18.72■□□□□ 0.59
SMPD3-211ENST00000568373 CFAP36Q96G28 342 aa18.72■□□□□ 0.59
SMPD3-211ENST00000568373 ELAC2Q9BQ52 826 aaKnown RBP18.72■□□□□ 0.59
SMPD3-211ENST00000568373 FERMT1Q9BQL6 677 aa18.72■□□□□ 0.59
SMPD3-211ENST00000568373 TSEN34Q9BSV6 310 aaKnown RBP18.72■□□□□ 0.59
SMPD3-211ENST00000568373 SSU72Q9NP77 194 aaKnown RBP18.72■□□□□ 0.59
SMPD3-211ENST00000568373 ZC3H7BQ9UGR2 993 aaKnown RBP18.72■□□□□ 0.59
SMPD3-211ENST00000568373 MYO18AQ92614 2054 aaKnown RBP18.71■□□□□ 0.59
SMPD3-211ENST00000568373 NLRC5Q86WI3 1866 aa18.71■□□□□ 0.59
SMPD3-211ENST00000568373 PPP1R12AO14974 1030 aaPredicted RBP18.71■□□□□ 0.59
SMPD3-211ENST00000568373 TYROBPO43914 113 aa18.71■□□□□ 0.59
SMPD3-211ENST00000568373 STK10O94804 968 aaKnown RBP18.71■□□□□ 0.59
SMPD3-211ENST00000568373 ASMTLO95671 621 aa18.71■□□□□ 0.59
SMPD3-211ENST00000568373 AMHP03971 560 aa18.71■□□□□ 0.59
SMPD3-211ENST00000568373 KRT4P19013 534 aa18.71■□□□□ 0.59
SMPD3-211ENST00000568373 FDFT1P37268 417 aa18.71■□□□□ 0.59
SMPD3-211ENST00000568373 AP1B1Q10567 949 aa18.71■□□□□ 0.59
SMPD3-211ENST00000568373 BSPRYQ5W0U4 402 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms