RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 C11orf74Q86VG3 221 aa15.27■□□□□ 0.04
FANCA-220ENST00000566409 PGBD3Q8N328 593 aa15.27■□□□□ 0.04
FANCA-220ENST00000566409 GPT2Q8TD30 523 aa15.27■□□□□ 0.04
FANCA-220ENST00000566409 RTKNQ9BST9 563 aa15.27■□□□□ 0.04
FANCA-220ENST00000566409 CALCOCO1Q9P1Z2 691 aa15.27■□□□□ 0.04
FANCA-220ENST00000566409 THAP10Q9P2Z0 257 aaPredicted RBP15.27■□□□□ 0.04
FANCA-220ENST00000566409 NAALADL1Q9UQQ1 740 aa15.27■□□□□ 0.04
FANCA-220ENST00000566409 TPRP12270 2363 aaKnown RBP15.27■□□□□ 0.03
FANCA-220ENST00000566409 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.26■□□□□ 0.03
FANCA-220ENST00000566409 E5RJQ4 531 aa15.26■□□□□ 0.03
FANCA-220ENST00000566409 FOXD2O60548 495 aaPredicted RBP15.26■□□□□ 0.03
FANCA-220ENST00000566409 CAVIN2O95810 425 aa15.26■□□□□ 0.03
FANCA-220ENST00000566409 LATS1O95835 1130 aa15.26■□□□□ 0.03
FANCA-220ENST00000566409 PNMA6AP0CW24 399 aaPredicted RBP15.26■□□□□ 0.03
FANCA-220ENST00000566409 NCAM1P13591 858 aa15.26■□□□□ 0.03
FANCA-220ENST00000566409 HLA-FP30511 346 aa15.26■□□□□ 0.03
FANCA-220ENST00000566409 USP8P40818 1118 aa15.26■□□□□ 0.03
FANCA-220ENST00000566409 IL12RB1P42701 662 aa15.26■□□□□ 0.03
FANCA-220ENST00000566409 PTGER3P43115 390 aa15.26■□□□□ 0.03
FANCA-220ENST00000566409 TAF5Q15542 800 aa15.26■□□□□ 0.03
FANCA-220ENST00000566409 MAN2A1Q16706 1144 aa15.26■□□□□ 0.03
FANCA-220ENST00000566409 TPD52L1Q16890 204 aaPredicted RBP15.26■□□□□ 0.03
FANCA-220ENST00000566409 VWA3BQ502W6 1294 aa15.26■□□□□ 0.03
FANCA-220ENST00000566409 MPPE1Q53F39 396 aa15.26■□□□□ 0.03
FANCA-220ENST00000566409 RNF43Q68DV7 783 aa15.26■□□□□ 0.03
FANCA-220ENST00000566409 NADSYN1Q6IA69 706 aa15.26■□□□□ 0.03
FANCA-220ENST00000566409 RFWD3Q6PCD5 774 aa15.26■□□□□ 0.03
FANCA-220ENST00000566409 TMEFF1Q8IYR6 380 aa15.26■□□□□ 0.03
FANCA-220ENST00000566409 ADAM32Q8TC27 787 aa15.26■□□□□ 0.03
FANCA-220ENST00000566409 DQX1Q8TE96 717 aaKnown RBP15.26■□□□□ 0.03
FANCA-220ENST00000566409 SORCS1Q8WY21 1168 aa15.26■□□□□ 0.03
FANCA-220ENST00000566409 MYEOVQ96EZ4 313 aa15.26■□□□□ 0.03
FANCA-220ENST00000566409 SLC39A13Q96H72 371 aa15.26■□□□□ 0.03
FANCA-220ENST00000566409 FCRL2Q96LA5 508 aaPredicted RBP15.26■□□□□ 0.03
FANCA-220ENST00000566409 SLC2A11Q9BYW1 496 aa15.26■□□□□ 0.03
FANCA-220ENST00000566409 NDST4Q9H3R1 872 aa15.26■□□□□ 0.03
FANCA-220ENST00000566409 CD93Q9NPY3 652 aa15.26■□□□□ 0.03
FANCA-220ENST00000566409 VPS45Q9NRW7 570 aa15.26■□□□□ 0.03
FANCA-220ENST00000566409 SAMSN1Q9NSI8 373 aaKnown RBP15.26■□□□□ 0.03
FANCA-220ENST00000566409 ELOVL2Q9NXB9 296 aa15.26■□□□□ 0.03
FANCA-220ENST00000566409 STON1Q9Y6Q2 735 aa15.26■□□□□ 0.03
FANCA-220ENST00000566409 MUC22E2RYF6 1773 aaPredicted RBP15.26■□□□□ 0.03
FANCA-220ENST00000566409 PATE3B3GLJ2 98 aa15.25■□□□□ 0.03
FANCA-220ENST00000566409 FOXN3O00409 490 aaPredicted RBP15.25■□□□□ 0.03
FANCA-220ENST00000566409 TM4SF5O14894 197 aa15.25■□□□□ 0.03
FANCA-220ENST00000566409 MED7O43513 233 aa15.25■□□□□ 0.03
FANCA-220ENST00000566409 CYBBP04839 570 aa15.25■□□□□ 0.03
FANCA-220ENST00000566409 CLCN1P35523 988 aa15.25■□□□□ 0.03
FANCA-220ENST00000566409 ACADSBP45954 432 aa15.25■□□□□ 0.03
FANCA-220ENST00000566409 DHPSP49366 369 aaPredicted RBP15.25■□□□□ 0.03
FANCA-220ENST00000566409 TBX4P57082 545 aa15.25■□□□□ 0.03
FANCA-220ENST00000566409 RING1Q06587 406 aa15.25■□□□□ 0.03
FANCA-220ENST00000566409 KCNMA1Q12791 1236 aa15.25■□□□□ 0.03
FANCA-220ENST00000566409 PDCLQ13371 301 aa15.25■□□□□ 0.03
FANCA-220ENST00000566409 AASDHQ4L235 1098 aaPredicted RBP15.25■□□□□ 0.03
FANCA-220ENST00000566409 PIK3R6Q5UE93 754 aa15.25■□□□□ 0.03
FANCA-220ENST00000566409 SDE2Q6IQ49 451 aa15.25■□□□□ 0.03
FANCA-220ENST00000566409 ANKS1BQ7Z6G8 1248 aa15.25■□□□□ 0.03
FANCA-220ENST00000566409 KIAA0907Q7Z7F0 614 aaPredicted RBP15.25■□□□□ 0.03
FANCA-220ENST00000566409 WFDC5Q8TCV5 224 aa15.25■□□□□ 0.03
FANCA-220ENST00000566409 TMA16Q96EY4 203 aaKnown RBP15.25■□□□□ 0.03
FANCA-220ENST00000566409 MRGPRX1Q96LB2 322 aa15.25■□□□□ 0.03
FANCA-220ENST00000566409 FAM81BQ96LP2 452 aa15.25■□□□□ 0.03
FANCA-220ENST00000566409 TUBGCP2Q9BSJ2 902 aa15.25■□□□□ 0.03
FANCA-220ENST00000566409 TMEM74BQ9NUR3 256 aa15.25■□□□□ 0.03
FANCA-220ENST00000566409 DNAJC12Q9UKB3 198 aa15.25■□□□□ 0.03
FANCA-220ENST00000566409 ASCC3Q8N3C0 2202 aaKnown RBP15.24■□□□□ 0.03
FANCA-220ENST00000566409 CEP295Q9C0D2 2601 aa15.24■□□□□ 0.03
FANCA-220ENST00000566409 ADAMTS9Q9P2N4 1935 aa15.24■□□□□ 0.03
FANCA-220ENST00000566409 IGHV1OR15-9A0A0B4J2B8 117 aa15.24■□□□□ 0.03
FANCA-220ENST00000566409 MAP3K13O43283 966 aa15.24■□□□□ 0.03
FANCA-220ENST00000566409 ACSL4O60488 711 aa15.24■□□□□ 0.03
FANCA-220ENST00000566409 LIMK1P53667 647 aa15.24■□□□□ 0.03
FANCA-220ENST00000566409 PITX1P78337 314 aaPredicted RBP15.24■□□□□ 0.03
FANCA-220ENST00000566409 EIF4EBP2Q13542 120 aaPredicted RBP15.24■□□□□ 0.03
FANCA-220ENST00000566409 ZNF234Q14588 700 aa15.24■□□□□ 0.03
FANCA-220ENST00000566409 NUMA1Q14980 2115 aa15.24■□□□□ 0.03
FANCA-220ENST00000566409 FUT11Q495W5 492 aa15.24■□□□□ 0.03
FANCA-220ENST00000566409 NUGGCQ68CJ6 796 aa15.24■□□□□ 0.03
FANCA-220ENST00000566409 BEND5Q7L4P6 421 aa15.24■□□□□ 0.03
FANCA-220ENST00000566409 ARMCX6Q7L4S7 300 aa15.24■□□□□ 0.03
FANCA-220ENST00000566409 LPCAT2Q7L5N7 544 aa15.24■□□□□ 0.03
FANCA-220ENST00000566409 TAC4Q86UU9 113 aa15.24■□□□□ 0.03
FANCA-220ENST00000566409 ADIPOR2Q86V24 386 aa15.24■□□□□ 0.03
FANCA-220ENST00000566409 SLC47A2Q86VL8 602 aa15.24■□□□□ 0.03
FANCA-220ENST00000566409 PASD1Q8IV76 773 aa15.24■□□□□ 0.03
FANCA-220ENST00000566409 UNC45BQ8IWX7 931 aa15.24■□□□□ 0.03
FANCA-220ENST00000566409 C12orf50Q8NA57 414 aaPredicted RBP15.24■□□□□ 0.03
FANCA-220ENST00000566409 GOLGA1Q92805 767 aa15.24■□□□□ 0.03
FANCA-220ENST00000566409 AZIN2Q96A70 460 aa15.24■□□□□ 0.03
FANCA-220ENST00000566409 FAM149B1Q96BN6 582 aa15.24■□□□□ 0.03
FANCA-220ENST00000566409 SPACA7Q96KW9 195 aa15.24■□□□□ 0.03
FANCA-220ENST00000566409 CPXM1Q96SM3 734 aa15.24■□□□□ 0.03
FANCA-220ENST00000566409 MKRN2Q9H000 416 aaKnown RBP15.24■□□□□ 0.03
FANCA-220ENST00000566409 PCDHGC3Q9UN70 934 aa15.24■□□□□ 0.03
FANCA-220ENST00000566409 TLR6Q9Y2C9 796 aa15.24■□□□□ 0.03
FANCA-220ENST00000566409 ACACBO00763 2458 aa15.24■□□□□ 0.03
FANCA-220ENST00000566409 CACNA1EQ15878 2313 aa15.23■□□□□ 0.03
FANCA-220ENST00000566409 LNP1A1A4G5 178 aa15.23■□□□□ 0.03
FANCA-220ENST00000566409 KCNJ18B7U540 433 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms