RNA–Protein interactions for RNA: ENST00000563911.5

HERPUD1-208, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 844 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-208ENST00000563911 DMTF1Q9Y222 760 aa6.7□□□□□ -1.34
HERPUD1-208ENST00000563911 MYO15AQ9UKN7 3530 aa6.7□□□□□ -1.34
HERPUD1-208ENST00000563911 C5orf42Q9H799 3197 aa6.7□□□□□ -1.34
HERPUD1-208ENST00000563911 MROH7Q68CQ1 1323 aa6.7□□□□□ -1.34
HERPUD1-208ENST00000563911 NAV1Q8NEY1 1877 aa6.69□□□□□ -1.34
HERPUD1-208ENST00000563911 PATE3B3GLJ2 98 aa6.69□□□□□ -1.34
HERPUD1-208ENST00000563911 RASA4BC9J798 803 aa6.69□□□□□ -1.34
HERPUD1-208ENST00000563911 RASA4O43374 803 aa6.69□□□□□ -1.34
HERPUD1-208ENST00000563911 ZNF623O75123 536 aa6.69□□□□□ -1.34
HERPUD1-208ENST00000563911 PRSS23O95084 383 aa6.69□□□□□ -1.34
HERPUD1-208ENST00000563911 UNC5CO95185 931 aa6.69□□□□□ -1.34
HERPUD1-208ENST00000563911 THP07101 528 aa6.69□□□□□ -1.34
HERPUD1-208ENST00000563911 CKBP12277 381 aa6.69□□□□□ -1.34
HERPUD1-208ENST00000563911 ACO1P21399 889 aaKnown RBP6.69□□□□□ -1.34
HERPUD1-208ENST00000563911 MXRA7P84157 204 aa6.69□□□□□ -1.34
HERPUD1-208ENST00000563911 TNFAIP2Q03169 654 aa6.69□□□□□ -1.34
HERPUD1-208ENST00000563911 ZNF543Q08ER8 600 aa6.69□□□□□ -1.34
HERPUD1-208ENST00000563911 SLC13A2Q13183 592 aa6.69□□□□□ -1.34
HERPUD1-208ENST00000563911 AAK1Q2M2I8 961 aa6.69□□□□□ -1.34
HERPUD1-208ENST00000563911 CRB2Q5IJ48 1285 aa6.69□□□□□ -1.34
HERPUD1-208ENST00000563911 C10orf62Q5T681 223 aaPredicted RBP6.69□□□□□ -1.34
HERPUD1-208ENST00000563911 SLC9C2Q5TAH2 1124 aa6.69□□□□□ -1.34
HERPUD1-208ENST00000563911 SPOCD1Q6ZMY3 1216 aa6.69□□□□□ -1.34
HERPUD1-208ENST00000563911 TOGARAM2Q6ZUX3 1019 aa6.69□□□□□ -1.34
HERPUD1-208ENST00000563911 RASGRP2Q7LDG7 609 aa6.69□□□□□ -1.34
HERPUD1-208ENST00000563911 SYT12Q8IV01 421 aa6.69□□□□□ -1.34
HERPUD1-208ENST00000563911 HERC6Q8IVU3 1022 aa6.69□□□□□ -1.34
HERPUD1-208ENST00000563911 ZNF808Q8N4W9 903 aaPredicted RBP6.69□□□□□ -1.34
HERPUD1-208ENST00000563911 TMIEQ8NEW7 156 aa6.69□□□□□ -1.34
HERPUD1-208ENST00000563911 Q8TCH9 128 aa6.69□□□□□ -1.34
HERPUD1-208ENST00000563911 GDPD5Q8WTR4 605 aa6.69□□□□□ -1.34
HERPUD1-208ENST00000563911 ARHGAP45Q92619 1136 aa6.69□□□□□ -1.34
HERPUD1-208ENST00000563911 KLHL32Q96NJ5 620 aa6.69□□□□□ -1.34
HERPUD1-208ENST00000563911 MNTQ99583 582 aa6.69□□□□□ -1.34
HERPUD1-208ENST00000563911 SSBP3Q9BWW4 388 aaPredicted RBP6.69□□□□□ -1.34
HERPUD1-208ENST00000563911 GPR87Q9BY21 358 aa6.69□□□□□ -1.34
HERPUD1-208ENST00000563911 UNKQ9C0B0 810 aaKnown RBP6.69□□□□□ -1.34
HERPUD1-208ENST00000563911 ALDH8A1Q9H2A2 487 aaPredicted RBP6.69□□□□□ -1.34
HERPUD1-208ENST00000563911 ABHD16BQ9H3Z7 469 aa6.69□□□□□ -1.34
HERPUD1-208ENST00000563911 GPR35Q9HC97 309 aa6.69□□□□□ -1.34
HERPUD1-208ENST00000563911 COG5Q9UP83 839 aa6.69□□□□□ -1.34
HERPUD1-208ENST00000563911 TET1Q8NFU7 2136 aa6.68□□□□□ -1.34
HERPUD1-208ENST00000563911 IGKV6D-41A0A0C4DH26 115 aa6.68□□□□□ -1.34
HERPUD1-208ENST00000563911 POM121BA6NF01 834 aa6.68□□□□□ -1.34
HERPUD1-208ENST00000563911 GOLGA6L6A8MZA4 724 aa6.68□□□□□ -1.34
HERPUD1-208ENST00000563911 F5H6K3 240 aa6.68□□□□□ -1.34
HERPUD1-208ENST00000563911 MYO1CO00159 1063 aa6.68□□□□□ -1.34
HERPUD1-208ENST00000563911 ATP2A1O14983 1001 aa6.68□□□□□ -1.34
HERPUD1-208ENST00000563911 IL18RAPO95256 599 aa6.68□□□□□ -1.34
HERPUD1-208ENST00000563911 ABHD16AO95870 558 aa6.68□□□□□ -1.34
HERPUD1-208ENST00000563911 NDUFB10O96000 172 aa6.68□□□□□ -1.34
HERPUD1-208ENST00000563911 TNFSF4P23510 183 aa6.68□□□□□ -1.34
HERPUD1-208ENST00000563911 STT3AP46977 705 aa6.68□□□□□ -1.34
HERPUD1-208ENST00000563911 SNAP25P60880 206 aa6.68□□□□□ -1.34
HERPUD1-208ENST00000563911 DEFB103AP81534 67 aa6.68□□□□□ -1.34
HERPUD1-208ENST00000563911 NHLH2Q02577 135 aa6.68□□□□□ -1.34
HERPUD1-208ENST00000563911 KLRC3Q07444 240 aa6.68□□□□□ -1.34
HERPUD1-208ENST00000563911 CTBP1Q13363 440 aa6.68□□□□□ -1.34
HERPUD1-208ENST00000563911 SLC44A4Q53GD3 710 aa6.68□□□□□ -1.34
HERPUD1-208ENST00000563911 HS1BP3Q53T59 392 aa6.68□□□□□ -1.34
HERPUD1-208ENST00000563911 NOMO2Q5JPE7 1267 aa6.68□□□□□ -1.34
HERPUD1-208ENST00000563911 TSHZ3Q63HK5 1081 aa6.68□□□□□ -1.34
HERPUD1-208ENST00000563911 LMBRD2Q68DH5 695 aaPredicted RBP6.68□□□□□ -1.34
HERPUD1-208ENST00000563911 XRRA1Q6P2D8 792 aa6.68□□□□□ -1.34
HERPUD1-208ENST00000563911 CTR9Q6PD62 1173 aa6.68□□□□□ -1.34
HERPUD1-208ENST00000563911 CCDC174Q6PII3 467 aa6.68□□□□□ -1.34
HERPUD1-208ENST00000563911 Q6ZSN1 163 aa6.68□□□□□ -1.34
HERPUD1-208ENST00000563911 LIX1LQ8IVB5 337 aa6.68□□□□□ -1.34
HERPUD1-208ENST00000563911 MPP5Q8N3R9 675 aa6.68□□□□□ -1.34
HERPUD1-208ENST00000563911 CCDC33Q8N5R6 958 aa6.68□□□□□ -1.34
HERPUD1-208ENST00000563911 SGCZQ96LD1 299 aa6.68□□□□□ -1.34
HERPUD1-208ENST00000563911 SLF1Q9BQI6 1058 aa6.68□□□□□ -1.34
HERPUD1-208ENST00000563911 TEX13BQ9BXU2 312 aa6.68□□□□□ -1.34
HERPUD1-208ENST00000563911 TINAGL1Q9GZM7 467 aaPredicted RBP6.68□□□□□ -1.34
HERPUD1-208ENST00000563911 SIK2Q9H0K1 926 aa6.68□□□□□ -1.34
HERPUD1-208ENST00000563911 SLC38A10Q9HBR0 1119 aa6.68□□□□□ -1.34
HERPUD1-208ENST00000563911 AGAP1Q9UPQ3 857 aa6.68□□□□□ -1.34
HERPUD1-208ENST00000563911 COL4A4P53420 1690 aaPredicted RBP6.68□□□□□ -1.34
HERPUD1-208ENST00000563911 CFAP54Q96N23 3096 aa6.68□□□□□ -1.34
HERPUD1-208ENST00000563911 F8W8V4 182 aa6.67□□□□□ -1.34
HERPUD1-208ENST00000563911 M0QYG6 137 aa6.67□□□□□ -1.34
HERPUD1-208ENST00000563911 LEFTY2O00292 366 aa6.67□□□□□ -1.34
HERPUD1-208ENST00000563911 MBD4O95243 580 aa6.67□□□□□ -1.34
HERPUD1-208ENST00000563911 CHEK2O96017 543 aa6.67□□□□□ -1.34
HERPUD1-208ENST00000563911 ITGB3P05106 788 aa6.67□□□□□ -1.34
HERPUD1-208ENST00000563911 GRPP07492 148 aa6.67□□□□□ -1.34
HERPUD1-208ENST00000563911 PARP1P09874 1014 aaKnown RBP6.67□□□□□ -1.34
HERPUD1-208ENST00000563911 IQCF3P0C7M6 154 aa6.67□□□□□ -1.34
HERPUD1-208ENST00000563911 SETSIPP0DME0 302 aa6.67□□□□□ -1.34
HERPUD1-208ENST00000563911 RAB32Q13637 225 aa6.67□□□□□ -1.34
HERPUD1-208ENST00000563911 DAG1Q14118 895 aa6.67□□□□□ -1.34
HERPUD1-208ENST00000563911 LEXMQ3ZCV2 418 aa6.67□□□□□ -1.34
HERPUD1-208ENST00000563911 FAM209BQ5JX69 171 aa6.67□□□□□ -1.34
HERPUD1-208ENST00000563911 C1QL3Q5VWW1 255 aa6.67□□□□□ -1.34
HERPUD1-208ENST00000563911 C1orf228Q6PIY5 440 aa6.67□□□□□ -1.34
HERPUD1-208ENST00000563911 Q6ZRM9 215 aa6.67□□□□□ -1.34
HERPUD1-208ENST00000563911 TLK2Q86UE8 772 aa6.67□□□□□ -1.34
HERPUD1-208ENST00000563911 FBXO16Q8IX29 292 aaPredicted RBP6.67□□□□□ -1.34
HERPUD1-208ENST00000563911 OR2C3Q8N628 320 aa6.67□□□□□ -1.34
HERPUD1-208ENST00000563911 SLC15A4Q8N697 577 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms