RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 OLA1Q9NTK5 396 aaKnown RBP13.58□□□□□ -0.24
SF3B3-202ENST00000562722 PI4KAP42356 2102 aa13.58□□□□□ -0.24
SF3B3-202ENST00000562722 IGF2RP11717 2491 aa13.57□□□□□ -0.24
SF3B3-202ENST00000562722 CHD6Q8TD26 2715 aa13.57□□□□□ -0.24
SF3B3-202ENST00000562722 BCAT2O15382 392 aaPredicted RBP13.57□□□□□ -0.24
SF3B3-202ENST00000562722 TIMM44O43615 452 aa13.57□□□□□ -0.24
SF3B3-202ENST00000562722 GJB3O75712 270 aa13.57□□□□□ -0.24
SF3B3-202ENST00000562722 CER1O95813 267 aa13.57□□□□□ -0.24
SF3B3-202ENST00000562722 HLA-EP13747 358 aa13.57□□□□□ -0.24
SF3B3-202ENST00000562722 COPAP53621 1224 aa13.57□□□□□ -0.24
SF3B3-202ENST00000562722 BCAT1P54687 386 aa13.57□□□□□ -0.24
SF3B3-202ENST00000562722 PDE4CQ08493 712 aa13.57□□□□□ -0.24
SF3B3-202ENST00000562722 ADIGQ0VDE8 80 aa13.57□□□□□ -0.24
SF3B3-202ENST00000562722 ENPP2Q13822 863 aa13.57□□□□□ -0.24
SF3B3-202ENST00000562722 EDRF1Q3B7T1 1238 aa13.57□□□□□ -0.24
SF3B3-202ENST00000562722 ZCWPW2Q504Y3 356 aa13.57□□□□□ -0.24
SF3B3-202ENST00000562722 MPPE1Q53F39 396 aa13.57□□□□□ -0.24
SF3B3-202ENST00000562722 SGO2Q562F6 1265 aa13.57□□□□□ -0.24
SF3B3-202ENST00000562722 RAB44Q7Z6P3 723 aaPredicted RBP13.57□□□□□ -0.24
SF3B3-202ENST00000562722 DNASE2BQ8WZ79 361 aa13.57□□□□□ -0.24
SF3B3-202ENST00000562722 EDEM1Q92611 657 aa13.57□□□□□ -0.24
SF3B3-202ENST00000562722 TATDN2Q93075 761 aa13.57□□□□□ -0.24
SF3B3-202ENST00000562722 FAXDC2Q96IV6 333 aa13.57□□□□□ -0.24
SF3B3-202ENST00000562722 TSG101Q99816 390 aa13.57□□□□□ -0.24
SF3B3-202ENST00000562722 LHX5Q9H2C1 402 aa13.57□□□□□ -0.24
SF3B3-202ENST00000562722 GAREM1Q9H706 876 aa13.57□□□□□ -0.24
SF3B3-202ENST00000562722 IL21RQ9HBE5 538 aa13.57□□□□□ -0.24
SF3B3-202ENST00000562722 SFMBT1Q9UHJ3 866 aa13.57□□□□□ -0.24
SF3B3-202ENST00000562722 EIF2B4Q9UI10 523 aaKnown RBP13.57□□□□□ -0.24
SF3B3-202ENST00000562722 TSPAN16Q9UKR8 245 aa13.57□□□□□ -0.24
SF3B3-202ENST00000562722 PLA2G4CQ9UP65 541 aa13.57□□□□□ -0.24
SF3B3-202ENST00000562722 APOBEC2Q9Y235 224 aaKnown RBP13.57□□□□□ -0.24
SF3B3-202ENST00000562722 NFE2L3Q9Y4A8 694 aa13.57□□□□□ -0.24
SF3B3-202ENST00000562722 CACNA1EQ15878 2313 aa13.56□□□□□ -0.24
SF3B3-202ENST00000562722 FAM237AA0A1B0GTK4 181 aa13.56□□□□□ -0.24
SF3B3-202ENST00000562722 METTL12A8MUP2 240 aa13.56□□□□□ -0.24
SF3B3-202ENST00000562722 TULP2O00295 520 aa13.56□□□□□ -0.24
SF3B3-202ENST00000562722 XPO1O14980 1071 aaKnown RBP13.56□□□□□ -0.24
SF3B3-202ENST00000562722 ZNF202O95125 648 aa13.56□□□□□ -0.24
SF3B3-202ENST00000562722 MATKP42679 507 aa13.56□□□□□ -0.24
SF3B3-202ENST00000562722 YWHAEP62258 255 aaKnown RBP13.56□□□□□ -0.24
SF3B3-202ENST00000562722 BST2Q10589 180 aaKnown RBP13.56□□□□□ -0.24
SF3B3-202ENST00000562722 CUL2Q13617 745 aa13.56□□□□□ -0.24
SF3B3-202ENST00000562722 IL27RAQ6UWB1 636 aa13.56□□□□□ -0.24
SF3B3-202ENST00000562722 ZNF366Q8N895 744 aa13.56□□□□□ -0.24
SF3B3-202ENST00000562722 OR2T3Q8NH03 318 aa13.56□□□□□ -0.24
SF3B3-202ENST00000562722 UBA3Q8TBC4 463 aa13.56□□□□□ -0.24
SF3B3-202ENST00000562722 CYB5D2Q8WUJ1 264 aa13.56□□□□□ -0.24
SF3B3-202ENST00000562722 GOLPH3LQ9H4A5 285 aa13.56□□□□□ -0.24
SF3B3-202ENST00000562722 LHX6Q9UPM6 363 aa13.56□□□□□ -0.24
SF3B3-202ENST00000562722 HBS1LQ9Y450 684 aaKnown RBP13.56□□□□□ -0.24
SF3B3-202ENST00000562722 ATP6V1DQ9Y5K8 247 aa13.56□□□□□ -0.24
SF3B3-202ENST00000562722 A0A1W2PQ27 194 aa13.55□□□□□ -0.24
SF3B3-202ENST00000562722 A0A1W2PQ64 194 aa13.55□□□□□ -0.24
SF3B3-202ENST00000562722 MSI1O43347 362 aaKnown RBP13.55□□□□□ -0.24
SF3B3-202ENST00000562722 LCP1P13796 627 aa13.55□□□□□ -0.24
SF3B3-202ENST00000562722 HOXD9P28356 352 aaPredicted RBP13.55□□□□□ -0.24
SF3B3-202ENST00000562722 ZNF445P59923 1031 aa13.55□□□□□ -0.24
SF3B3-202ENST00000562722 RING1Q06587 406 aa13.55□□□□□ -0.24
SF3B3-202ENST00000562722 LRMPQ12912 555 aa13.55□□□□□ -0.24
SF3B3-202ENST00000562722 TRIP4Q15650 581 aaPredicted RBP13.55□□□□□ -0.24
SF3B3-202ENST00000562722 HLA-BQ31612 363 aa13.55□□□□□ -0.24
SF3B3-202ENST00000562722 CBWD6Q4V339 395 aa13.55□□□□□ -0.24
SF3B3-202ENST00000562722 CBWD3Q5JTY5 395 aa13.55□□□□□ -0.24
SF3B3-202ENST00000562722 CBWD5Q5RIA9 395 aa13.55□□□□□ -0.24
SF3B3-202ENST00000562722 BSPRYQ5W0U4 402 aa13.55□□□□□ -0.24
SF3B3-202ENST00000562722 TMEM215Q68D42 235 aa13.55□□□□□ -0.24
SF3B3-202ENST00000562722 PM20D1Q6GTS8 502 aa13.55□□□□□ -0.24
SF3B3-202ENST00000562722 CHST9Q7L1S5 443 aa13.55□□□□□ -0.24
SF3B3-202ENST00000562722 FAM217AQ8IXS0 508 aa13.55□□□□□ -0.24
SF3B3-202ENST00000562722 WFIKKN2Q8TEU8 576 aa13.55□□□□□ -0.24
SF3B3-202ENST00000562722 ADAMTS14Q8WXS8 1223 aa13.55□□□□□ -0.24
SF3B3-202ENST00000562722 TMA16Q96EY4 203 aaKnown RBP13.55□□□□□ -0.24
SF3B3-202ENST00000562722 SCAND2PQ9GZW5 306 aaPredicted RBP13.55□□□□□ -0.24
SF3B3-202ENST00000562722 TM7SF3Q9NS93 570 aa13.55□□□□□ -0.24
SF3B3-202ENST00000562722 ABCB8Q9NUT2 735 aa13.55□□□□□ -0.24
SF3B3-202ENST00000562722 RMND1Q9NWS8 449 aa13.55□□□□□ -0.24
SF3B3-202ENST00000562722 PCOLCE2Q9UKZ9 415 aa13.55□□□□□ -0.24
SF3B3-202ENST00000562722 FNDC3AQ9Y2H6 1198 aaKnown RBP13.55□□□□□ -0.24
SF3B3-202ENST00000562722 A0A1B0GVT2 93 aa13.54□□□□□ -0.24
SF3B3-202ENST00000562722 FAM221BA6H8Z2 402 aa13.54□□□□□ -0.24
SF3B3-202ENST00000562722 GOLGA8CPA6NN73 597 aa13.54□□□□□ -0.24
SF3B3-202ENST00000562722 YJEFN3A6XGL0 299 aa13.54□□□□□ -0.24
SF3B3-202ENST00000562722 E7ENQ6 273 aa13.54□□□□□ -0.24
SF3B3-202ENST00000562722 SLC16A3O15427 465 aaKnown RBP13.54□□□□□ -0.24
SF3B3-202ENST00000562722 IGLV3-19P01714 112 aa13.54□□□□□ -0.24
SF3B3-202ENST00000562722 HLA-FP30511 346 aa13.54□□□□□ -0.24
SF3B3-202ENST00000562722 CSNK1EP49674 416 aaKnown RBP13.54□□□□□ -0.24
SF3B3-202ENST00000562722 AFF3P51826 1226 aaKnown RBP13.54□□□□□ -0.24
SF3B3-202ENST00000562722 SCAPQ12770 1279 aa13.54□□□□□ -0.24
SF3B3-202ENST00000562722 PNOCQ13519 176 aa13.54□□□□□ -0.24
SF3B3-202ENST00000562722 TEAD4Q15561 434 aa13.54□□□□□ -0.24
SF3B3-202ENST00000562722 ADGRF1Q5T601 910 aa13.54□□□□□ -0.24
SF3B3-202ENST00000562722 AHI1Q8N157 1196 aa13.54□□□□□ -0.24
SF3B3-202ENST00000562722 GOLGA1Q92805 767 aa13.54□□□□□ -0.24
SF3B3-202ENST00000562722 C6orf106Q9H6K1 298 aaPredicted RBP13.54□□□□□ -0.24
SF3B3-202ENST00000562722 ABCC13Q9NSE7 274 aa13.54□□□□□ -0.24
SF3B3-202ENST00000562722 GGA2Q9UJY4 613 aa13.54□□□□□ -0.24
SF3B3-202ENST00000562722 ZDHHC9Q9Y397 364 aa13.54□□□□□ -0.24
SF3B3-202ENST00000562722 FAM208BQ5VWN6 2430 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms