RNA–Protein interactions for RNA: ENST00000556765.1

TRAPPC6B-206, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 3

Gene TRAPPC6B, Length 664 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-206ENST00000556765 RBM12Q9NTZ6 932 aaKnown RBP14.88□□□□□ -0.03
TRAPPC6B-206ENST00000556765 C2orf42Q9NWW7 574 aa14.88□□□□□ -0.03
TRAPPC6B-206ENST00000556765 DDX56Q9NY93 547 aaKnown RBP14.88□□□□□ -0.03
TRAPPC6B-206ENST00000556765 ADAMTS20P59510 1910 aa14.88□□□□□ -0.03
TRAPPC6B-206ENST00000556765 KALRNO60229 2985 aa14.87□□□□□ -0.03
TRAPPC6B-206ENST00000556765 TMEM110-MUSTN1A8MSY1 372 aa14.87□□□□□ -0.03
TRAPPC6B-206ENST00000556765 KRIT1O00522 736 aa14.87□□□□□ -0.03
TRAPPC6B-206ENST00000556765 ERBB2P04626 1255 aa14.87□□□□□ -0.03
TRAPPC6B-206ENST00000556765 CYP11A1P05108 521 aa14.87□□□□□ -0.03
TRAPPC6B-206ENST00000556765 HOXC13P31276 330 aa14.87□□□□□ -0.03
TRAPPC6B-206ENST00000556765 RPL34P49207 117 aaKnown RBP14.87□□□□□ -0.03
TRAPPC6B-206ENST00000556765 DNA2P51530 1060 aa14.87□□□□□ -0.03
TRAPPC6B-206ENST00000556765 COPS2P61201 443 aa14.87□□□□□ -0.03
TRAPPC6B-206ENST00000556765 C2orf54Q08AI8 447 aa14.87□□□□□ -0.03
TRAPPC6B-206ENST00000556765 UPP1Q16831 310 aa14.87□□□□□ -0.03
TRAPPC6B-206ENST00000556765 HADHQ16836 314 aaKnown RBP14.87□□□□□ -0.03
TRAPPC6B-206ENST00000556765 SLC5A9Q2M3M2 681 aa14.87□□□□□ -0.03
TRAPPC6B-206ENST00000556765 DAB2IPQ5VWQ8 1189 aa14.87□□□□□ -0.03
TRAPPC6B-206ENST00000556765 DSTYKQ6XUX3 929 aa14.87□□□□□ -0.03
TRAPPC6B-206ENST00000556765 Q6ZS52 159 aa14.87□□□□□ -0.03
TRAPPC6B-206ENST00000556765 ACOT1Q86TX2 421 aa14.87□□□□□ -0.03
TRAPPC6B-206ENST00000556765 XYLT1Q86Y38 959 aa14.87□□□□□ -0.03
TRAPPC6B-206ENST00000556765 KATNAL2Q8IYT4 538 aa14.87□□□□□ -0.03
TRAPPC6B-206ENST00000556765 B3GALNT2Q8NCR0 500 aa14.87□□□□□ -0.03
TRAPPC6B-206ENST00000556765 GAB3Q8WWW8 586 aa14.87□□□□□ -0.03
TRAPPC6B-206ENST00000556765 SENP8Q96LD8 212 aa14.87□□□□□ -0.03
TRAPPC6B-206ENST00000556765 HNRNPABQ99729 332 aaKnown RBP14.87□□□□□ -0.03
TRAPPC6B-206ENST00000556765 SLC4A5Q9BY07 1137 aa14.87□□□□□ -0.03
TRAPPC6B-206ENST00000556765 CXCL16Q9H2A7 254 aa14.87□□□□□ -0.03
TRAPPC6B-206ENST00000556765 MIOSQ9NXC5 875 aa14.87□□□□□ -0.03
TRAPPC6B-206ENST00000556765 STIM2Q9P246 746 aa14.87□□□□□ -0.03
TRAPPC6B-206ENST00000556765 CDH9Q9ULB4 789 aa14.87□□□□□ -0.03
TRAPPC6B-206ENST00000556765 NEUROG3Q9Y4Z2 214 aa14.87□□□□□ -0.03
TRAPPC6B-206ENST00000556765 TICRRQ7Z2Z1 1910 aa14.86□□□□□ -0.03
TRAPPC6B-206ENST00000556765 RPP40O75818 363 aaKnown RBP14.86□□□□□ -0.03
TRAPPC6B-206ENST00000556765 FGGP02679 453 aa14.86□□□□□ -0.03
TRAPPC6B-206ENST00000556765 KRT7P08729 469 aa14.86□□□□□ -0.03
TRAPPC6B-206ENST00000556765 CEACAM1P13688 526 aa14.86□□□□□ -0.03
TRAPPC6B-206ENST00000556765 CEBPBP17676 345 aa14.86□□□□□ -0.03
TRAPPC6B-206ENST00000556765 TYMPP19971 482 aa14.86□□□□□ -0.03
TRAPPC6B-206ENST00000556765 GDI1P31150 447 aa14.86□□□□□ -0.03
TRAPPC6B-206ENST00000556765 DHX34Q14147 1143 aaKnown RBP14.86□□□□□ -0.03
TRAPPC6B-206ENST00000556765 NAA30Q147X3 362 aaPredicted RBP14.86□□□□□ -0.03
TRAPPC6B-206ENST00000556765 MAPRE1Q15691 268 aaKnown RBP14.86□□□□□ -0.03
TRAPPC6B-206ENST00000556765 PSMD5Q16401 504 aa14.86□□□□□ -0.03
TRAPPC6B-206ENST00000556765 LONRF2Q1L5Z9 754 aa14.86□□□□□ -0.03
TRAPPC6B-206ENST00000556765 PPP1R26Q5T8A7 1209 aaPredicted RBP14.86□□□□□ -0.03
TRAPPC6B-206ENST00000556765 KIAA1211LQ6NV74 962 aa14.86□□□□□ -0.03
TRAPPC6B-206ENST00000556765 FBXO38Q6PIJ6 1188 aa14.86□□□□□ -0.03
TRAPPC6B-206ENST00000556765 C19orf48Q6RUI8 117 aa14.86□□□□□ -0.03
TRAPPC6B-206ENST00000556765 TMEM110Q86TL2 294 aa14.86□□□□□ -0.03
TRAPPC6B-206ENST00000556765 EXD1Q8NHP7 514 aa14.86□□□□□ -0.03
TRAPPC6B-206ENST00000556765 ALG3Q92685 438 aa14.86□□□□□ -0.03
TRAPPC6B-206ENST00000556765 MCEEQ96PE7 176 aa14.86□□□□□ -0.03
TRAPPC6B-206ENST00000556765 CPXM1Q96SM3 734 aa14.86□□□□□ -0.03
TRAPPC6B-206ENST00000556765 GOLGA2P5Q9HBQ8 144 aa14.86□□□□□ -0.03
TRAPPC6B-206ENST00000556765 ZFP14Q9HCL3 533 aa14.86□□□□□ -0.03
TRAPPC6B-206ENST00000556765 ASNSD1Q9NWL6 643 aa14.86□□□□□ -0.03
TRAPPC6B-206ENST00000556765 GPSM3Q9Y4H4 160 aa14.86□□□□□ -0.03
TRAPPC6B-206ENST00000556765 UNC79Q9P2D8 2635 aa14.86□□□□□ -0.03
TRAPPC6B-206ENST00000556765 M0QZQ0 153 aa14.85□□□□□ -0.03
TRAPPC6B-206ENST00000556765 XPO1O14980 1071 aaKnown RBP14.85□□□□□ -0.03
TRAPPC6B-206ENST00000556765 TRAPPC3O43617 180 aa14.85□□□□□ -0.03
TRAPPC6B-206ENST00000556765 TADA2AO75478 443 aa14.85□□□□□ -0.03
TRAPPC6B-206ENST00000556765 RNF8O76064 485 aa14.85□□□□□ -0.03
TRAPPC6B-206ENST00000556765 RHOP08100 348 aa14.85□□□□□ -0.03
TRAPPC6B-206ENST00000556765 RHOXF2BP0C7M4 288 aa14.85□□□□□ -0.03
TRAPPC6B-206ENST00000556765 CHRNA3P32297 505 aa14.85□□□□□ -0.03
TRAPPC6B-206ENST00000556765 GBP1P32455 592 aa14.85□□□□□ -0.03
TRAPPC6B-206ENST00000556765 PTPN7P35236 360 aa14.85□□□□□ -0.03
TRAPPC6B-206ENST00000556765 PLA2G4AP47712 749 aa14.85□□□□□ -0.03
TRAPPC6B-206ENST00000556765 CLCNKBP51801 687 aa14.85□□□□□ -0.03
TRAPPC6B-206ENST00000556765 FAM78AQ5JUQ0 283 aa14.85□□□□□ -0.03
TRAPPC6B-206ENST00000556765 DCAF12L1Q5VU92 463 aa14.85□□□□□ -0.03
TRAPPC6B-206ENST00000556765 IFT20Q8IY31 132 aa14.85□□□□□ -0.03
TRAPPC6B-206ENST00000556765 SLC35F5Q8WV83 523 aa14.85□□□□□ -0.03
TRAPPC6B-206ENST00000556765 PIK3R5Q8WYR1 880 aa14.85□□□□□ -0.03
TRAPPC6B-206ENST00000556765 TSC1Q92574 1164 aa14.85□□□□□ -0.03
TRAPPC6B-206ENST00000556765 MS4A14Q96JA4 679 aa14.85□□□□□ -0.03
TRAPPC6B-206ENST00000556765 RHOXF2Q9BQY4 288 aa14.85□□□□□ -0.03
TRAPPC6B-206ENST00000556765 UBXN6Q9BZV1 441 aa14.85□□□□□ -0.03
TRAPPC6B-206ENST00000556765 RASAL2Q9UJF2 1139 aa14.85□□□□□ -0.03
TRAPPC6B-206ENST00000556765 MSRB2Q9Y3D2 182 aa14.85□□□□□ -0.03
TRAPPC6B-206ENST00000556765 TENM4Q6N022 2769 aa14.85□□□□□ -0.03
TRAPPC6B-206ENST00000556765 SF3B1O75533 1304 aaKnown RBP eCLIP14.85□□□□□ -0.033e-8■■■■■ 218.3
TRAPPC6B-206ENST00000556765 FAM187AA6NFU0 413 aa14.84□□□□□ -0.03
TRAPPC6B-206ENST00000556765 DPYSL4O14531 572 aa14.84□□□□□ -0.03
TRAPPC6B-206ENST00000556765 ADAM12O43184 909 aa14.84□□□□□ -0.03
TRAPPC6B-206ENST00000556765 SART1O43290 800 aaKnown RBP14.84□□□□□ -0.03
TRAPPC6B-206ENST00000556765 HYAL3O43820 417 aaPredicted RBP14.84□□□□□ -0.03
TRAPPC6B-206ENST00000556765 ZRANB2O95218 330 aaKnown RBP eCLIP14.84□□□□□ -0.03
TRAPPC6B-206ENST00000556765 PSMC3P17980 439 aa14.84□□□□□ -0.03
TRAPPC6B-206ENST00000556765 PTPN1P18031 435 aaKnown RBP14.84□□□□□ -0.03
TRAPPC6B-206ENST00000556765 CSRP1P21291 193 aaKnown RBP14.84□□□□□ -0.03
TRAPPC6B-206ENST00000556765 PCK1P35558 622 aa14.84□□□□□ -0.03
TRAPPC6B-206ENST00000556765 FNTAP49354 379 aa14.84□□□□□ -0.03
TRAPPC6B-206ENST00000556765 CLCN6P51797 869 aa14.84□□□□□ -0.03
TRAPPC6B-206ENST00000556765 ODF2Q5BJF6 829 aa14.84□□□□□ -0.03
TRAPPC6B-206ENST00000556765 PROSER1Q86XN7 944 aa14.84□□□□□ -0.03
TRAPPC6B-206ENST00000556765 CEP57Q86XR8 500 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms