RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 WWP1Q9H0M0 922 aa17.81■□□□□ 0.44
PTPN21-208ENST00000556564 CDY1Q9Y6F8 540 aa17.81■□□□□ 0.44
PTPN21-208ENST00000556564 PLIN4Q96Q06 1357 aa17.81■□□□□ 0.44
PTPN21-208ENST00000556564 MIPOL1Q8TD10 442 aa17.81■□□□□ 0.44
PTPN21-208ENST00000556564 CCDC124Q96CT7 223 aaKnown RBP17.81■□□□□ 0.44
PTPN21-208ENST00000556564 TBCBQ99426 244 aa17.81■□□□□ 0.44
PTPN21-208ENST00000556564 TBL1YQ9BQ87 522 aa17.81■□□□□ 0.44
PTPN21-208ENST00000556564 C10orf88Q9H8K7 445 aa17.81■□□□□ 0.44
PTPN21-208ENST00000556564 ZNF214Q9UL59 606 aaPredicted RBP17.81■□□□□ 0.44
PTPN21-208ENST00000556564 ARFGEF2Q9Y6D5 1785 aa17.81■□□□□ 0.44
PTPN21-208ENST00000556564 SLC8A1P32418 973 aa17.81■□□□□ 0.44
PTPN21-208ENST00000556564 LRRC74AQ0VAA2 488 aa17.81■□□□□ 0.44
PTPN21-208ENST00000556564 WASHC5Q12768 1159 aa17.81■□□□□ 0.44
PTPN21-208ENST00000556564 FBXL19Q6PCT2 694 aa17.81■□□□□ 0.44
PTPN21-208ENST00000556564 NIFKQ9BYG3 293 aaKnown RBP17.81■□□□□ 0.44
PTPN21-208ENST00000556564 LGR5O75473 907 aa17.8■□□□□ 0.44
PTPN21-208ENST00000556564 TSHZ1Q6ZSZ6 1077 aa17.8■□□□□ 0.44
PTPN21-208ENST00000556564 TOP6BLQ8N6T0 577 aa17.8■□□□□ 0.44
PTPN21-208ENST00000556564 NAT16Q8N8M0 369 aa17.8■□□□□ 0.44
PTPN21-208ENST00000556564 ANKRD52Q8NB46 1076 aa17.8■□□□□ 0.44
PTPN21-208ENST00000556564 USH1CQ9Y6N9 552 aa17.8■□□□□ 0.44
PTPN21-208ENST00000556564 CCDC22O60826 627 aa17.8■□□□□ 0.44
PTPN21-208ENST00000556564 CYP2A6P11509 494 aaPredicted RBP17.8■□□□□ 0.44
PTPN21-208ENST00000556564 MMP13P45452 471 aa17.8■□□□□ 0.44
PTPN21-208ENST00000556564 CCNG2Q16589 344 aa17.8■□□□□ 0.44
PTPN21-208ENST00000556564 ACBD5Q5T8D3 534 aaPredicted RBP17.8■□□□□ 0.44
PTPN21-208ENST00000556564 MFSD7Q6UXD7 560 aa17.8■□□□□ 0.44
PTPN21-208ENST00000556564 TDRKHQ9Y2W6 561 aaKnown RBP17.8■□□□□ 0.44
PTPN21-208ENST00000556564 LYPLA2O95372 231 aa17.8■□□□□ 0.44
PTPN21-208ENST00000556564 PIP4K2CQ8TBX8 421 aa17.8■□□□□ 0.44
PTPN21-208ENST00000556564 ECT2Q9H8V3 914 aa17.8■□□□□ 0.44
PTPN21-208ENST00000556564 SPASTQ9UBP0 616 aa17.8■□□□□ 0.44
PTPN21-208ENST00000556564 LRP6O75581 1613 aa17.8■□□□□ 0.44
PTPN21-208ENST00000556564 SMIM28A0A1B0GU29 152 aa17.8■□□□□ 0.44
PTPN21-208ENST00000556564 RNF103O00237 685 aa17.8■□□□□ 0.44
PTPN21-208ENST00000556564 PYGMP11217 842 aa17.8■□□□□ 0.44
PTPN21-208ENST00000556564 NPLOC4Q8TAT6 608 aa17.8■□□□□ 0.44
PTPN21-208ENST00000556564 GIMAP4Q9NUV9 329 aa17.8■□□□□ 0.44
PTPN21-208ENST00000556564 ATRNL1Q5VV63 1379 aa17.8■□□□□ 0.44
PTPN21-208ENST00000556564 SERPINB8P50452 374 aa17.8■□□□□ 0.44
PTPN21-208ENST00000556564 CLCNKBP51801 687 aa17.8■□□□□ 0.44
PTPN21-208ENST00000556564 ACLYP53396 1101 aa17.8■□□□□ 0.44
PTPN21-208ENST00000556564 CYP4F12Q9HCS2 524 aa17.8■□□□□ 0.44
PTPN21-208ENST00000556564 AP5Z1O43299 807 aa17.79■□□□□ 0.44
PTPN21-208ENST00000556564 PCNAP12004 261 aa17.79■□□□□ 0.44
PTPN21-208ENST00000556564 KDSRQ06136 332 aa17.79■□□□□ 0.44
PTPN21-208ENST00000556564 NPNTQ6UXI9 565 aa17.79■□□□□ 0.44
PTPN21-208ENST00000556564 EPS8L1Q8TE68 723 aa17.79■□□□□ 0.44
PTPN21-208ENST00000556564 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.79■□□□□ 0.44
PTPN21-208ENST00000556564 FAM161BQ96MY7 647 aa17.79■□□□□ 0.44
PTPN21-208ENST00000556564 ACTR5Q9H9F9 607 aaPredicted RBP17.79■□□□□ 0.44
PTPN21-208ENST00000556564 ANLNQ9NQW6 1124 aa17.79■□□□□ 0.44
PTPN21-208ENST00000556564 ADAM21Q9UKJ8 722 aa17.79■□□□□ 0.44
PTPN21-208ENST00000556564 WDR27A2RRH5 827 aa17.79■□□□□ 0.44
PTPN21-208ENST00000556564 IFRD1O00458 451 aaPredicted RBP17.79■□□□□ 0.44
PTPN21-208ENST00000556564 FAM35AQ86V20 835 aa17.79■□□□□ 0.44
PTPN21-208ENST00000556564 GBP7Q8N8V2 638 aaPredicted RBP17.79■□□□□ 0.44
PTPN21-208ENST00000556564 MTMR8Q96EF0 704 aa17.79■□□□□ 0.44
PTPN21-208ENST00000556564 SRRDQ9UH36 339 aa17.79■□□□□ 0.44
PTPN21-208ENST00000556564 KLRG2A4D1S0 409 aaPredicted RBP17.79■□□□□ 0.44
PTPN21-208ENST00000556564 ARL5CA6NH57 179 aa17.79■□□□□ 0.44
PTPN21-208ENST00000556564 STMN1P16949 149 aa17.79■□□□□ 0.44
PTPN21-208ENST00000556564 CYP2C18P33260 490 aa17.79■□□□□ 0.44
PTPN21-208ENST00000556564 HDAC4P56524 1084 aa17.79■□□□□ 0.44
PTPN21-208ENST00000556564 LZTR1Q8N653 840 aa17.79■□□□□ 0.44
PTPN21-208ENST00000556564 ACTRT1Q8TDG2 376 aa17.79■□□□□ 0.44
PTPN21-208ENST00000556564 ZCCHC17Q9NP64 241 aaKnown RBP17.79■□□□□ 0.44
PTPN21-208ENST00000556564 MRPL40Q9NQ50 206 aaKnown RBP17.79■□□□□ 0.44
PTPN21-208ENST00000556564 WHRNQ9P202 907 aa17.79■□□□□ 0.44
PTPN21-208ENST00000556564 SFMBT1Q9UHJ3 866 aa17.79■□□□□ 0.44
PTPN21-208ENST00000556564 MBTD1Q05BQ5 628 aa17.79■□□□□ 0.44
PTPN21-208ENST00000556564 KRT80Q6KB66 452 aa17.79■□□□□ 0.44
PTPN21-208ENST00000556564 FBXO22Q8NEZ5 403 aa17.79■□□□□ 0.44
PTPN21-208ENST00000556564 FGFBP2Q9BYJ0 223 aa17.79■□□□□ 0.44
PTPN21-208ENST00000556564 PPCSQ9HAB8 311 aa17.79■□□□□ 0.44
PTPN21-208ENST00000556564 RRP15Q9Y3B9 282 aaKnown RBP17.79■□□□□ 0.44
PTPN21-208ENST00000556564 OR6C75A6NL08 312 aa17.79■□□□□ 0.44
PTPN21-208ENST00000556564 ZIM3Q96PE6 472 aa17.79■□□□□ 0.44
PTPN21-208ENST00000556564 DERAQ9Y315 318 aa17.79■□□□□ 0.44
PTPN21-208ENST00000556564 DYRK1BQ9Y463 629 aa17.79■□□□□ 0.44
PTPN21-208ENST00000556564 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.79■□□□□ 0.44
PTPN21-208ENST00000556564 NR2C2P49116 596 aa17.78■□□□□ 0.44
PTPN21-208ENST00000556564 TAF11Q15544 211 aa17.78■□□□□ 0.44
PTPN21-208ENST00000556564 HYIQ5T013 277 aa17.78■□□□□ 0.44
PTPN21-208ENST00000556564 GPR158Q5T848 1215 aa17.78■□□□□ 0.44
PTPN21-208ENST00000556564 MED8Q96G25 268 aa17.78■□□□□ 0.44
PTPN21-208ENST00000556564 LOC102724159A0A0B4J2E5 919 aa17.78■□□□□ 0.44
PTPN21-208ENST00000556564 FAM95CA0A1B0GW59 222 aa17.78■□□□□ 0.44
PTPN21-208ENST00000556564 PDZK1P1A8MUH7 402 aa17.78■□□□□ 0.44
PTPN21-208ENST00000556564 H0Y3Z8 333 aa17.78■□□□□ 0.44
PTPN21-208ENST00000556564 ERVK-10P10266 1014 aa17.78■□□□□ 0.44
PTPN21-208ENST00000556564 MGAT1P26572 445 aa17.78■□□□□ 0.44
PTPN21-208ENST00000556564 ARL2P36404 184 aa17.78■□□□□ 0.44
PTPN21-208ENST00000556564 MAMLD1Q13495 774 aa17.78■□□□□ 0.44
PTPN21-208ENST00000556564 PWP2Q15269 919 aaKnown RBP17.78■□□□□ 0.44
PTPN21-208ENST00000556564 ARMC12Q5T9G4 340 aa17.78■□□□□ 0.44
PTPN21-208ENST00000556564 NPAS4Q8IUM7 802 aa17.78■□□□□ 0.44
PTPN21-208ENST00000556564 MAGEB10Q96LZ2 347 aaPredicted RBP17.78■□□□□ 0.44
PTPN21-208ENST00000556564 TCF25Q9BQ70 676 aa17.78■□□□□ 0.44
PTPN21-208ENST00000556564 TXNRD2Q9NNW7 524 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms