RNA–Protein interactions for RNA: ENST00000555246.5

LINC00871-201, long intergenic non-protein coding RNA 871, humanhuman

TSL 5 BASIC

Gene LINC00871, Length 408 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00871-201ENST00000555246 GABRG2P18507 467 aa5.28□□□□□ -1.56
LINC00871-201ENST00000555246 MSX1P28360 303 aa5.28□□□□□ -1.56
LINC00871-201ENST00000555246 NTSR1P30989 418 aa5.28□□□□□ -1.56
LINC00871-201ENST00000555246 GBP1P32455 592 aa5.28□□□□□ -1.56
LINC00871-201ENST00000555246 PTGER3P43115 390 aa5.28□□□□□ -1.56
LINC00871-201ENST00000555246 ASPAP45381 313 aa5.28□□□□□ -1.56
LINC00871-201ENST00000555246 CASP4P49662 377 aa5.28□□□□□ -1.56
LINC00871-201ENST00000555246 NOVA1P51513 510 aaKnown RBP5.28□□□□□ -1.56
LINC00871-201ENST00000555246 CYP2J2P51589 502 aa5.28□□□□□ -1.56
LINC00871-201ENST00000555246 IRX4P78413 519 aa5.28□□□□□ -1.56
LINC00871-201ENST00000555246 ZNF252P-AS1Q0IIN9 211 aa5.28□□□□□ -1.56
LINC00871-201ENST00000555246 STK4Q13043 487 aa5.28□□□□□ -1.56
LINC00871-201ENST00000555246 SEMA3BQ13214 749 aa5.28□□□□□ -1.56
LINC00871-201ENST00000555246 CUL4BQ13620 913 aa5.28□□□□□ -1.56
LINC00871-201ENST00000555246 SGSM1Q2NKQ1 1148 aa5.28□□□□□ -1.56
LINC00871-201ENST00000555246 TRIM61Q5EBN2 209 aa5.28□□□□□ -1.56
LINC00871-201ENST00000555246 ARSJQ5FYB0 599 aaPredicted RBP5.28□□□□□ -1.56
LINC00871-201ENST00000555246 C1orf220Q5T0J3 134 aa5.28□□□□□ -1.56
LINC00871-201ENST00000555246 LYSMD4Q5XG99 296 aa5.28□□□□□ -1.56
LINC00871-201ENST00000555246 PSAPL1Q6NUJ1 521 aa5.28□□□□□ -1.56
LINC00871-201ENST00000555246 UNQ6494/PRO21346Q6UXR6 183 aa5.28□□□□□ -1.56
LINC00871-201ENST00000555246 SLC36A4Q6YBV0 504 aa5.28□□□□□ -1.56
LINC00871-201ENST00000555246 CLEC20AQ6ZU45 233 aa5.28□□□□□ -1.56
LINC00871-201ENST00000555246 LYSMD3Q7Z3D4 306 aa5.28□□□□□ -1.56
LINC00871-201ENST00000555246 CCDC186Q7Z3E2 898 aa5.28□□□□□ -1.56
LINC00871-201ENST00000555246 BBS7Q8IWZ6 715 aa5.28□□□□□ -1.56
LINC00871-201ENST00000555246 NELFCDQ8IXH7 590 aa5.28□□□□□ -1.56
LINC00871-201ENST00000555246 ZNF513Q8N8E2 541 aaPredicted RBP5.28□□□□□ -1.56
LINC00871-201ENST00000555246 SCAMP5Q8TAC9 235 aa5.28□□□□□ -1.56
LINC00871-201ENST00000555246 CDK5RAP1Q96SZ6 601 aaKnown RBP5.28□□□□□ -1.56
LINC00871-201ENST00000555246 HNRNPABQ99729 332 aaKnown RBP5.28□□□□□ -1.56
LINC00871-201ENST00000555246 SMOQ99835 787 aa5.28□□□□□ -1.56
LINC00871-201ENST00000555246 TPSD1Q9BZJ3 242 aa5.28□□□□□ -1.56
LINC00871-201ENST00000555246 SDCBP2Q9H190 292 aa5.28□□□□□ -1.56
LINC00871-201ENST00000555246 CYP3A43Q9HB55 503 aa5.28□□□□□ -1.56
LINC00871-201ENST00000555246 NPHS2Q9NP85 383 aa5.28□□□□□ -1.56
LINC00871-201ENST00000555246 TLR8Q9NR97 1041 aaKnown RBP5.28□□□□□ -1.56
LINC00871-201ENST00000555246 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.28□□□□□ -1.56
LINC00871-201ENST00000555246 CLIC5Q9NZA1 410 aa5.28□□□□□ -1.56
LINC00871-201ENST00000555246 GMIPQ9P107 970 aa5.28□□□□□ -1.56
LINC00871-201ENST00000555246 DEC1Q9P2X7 70 aa5.28□□□□□ -1.56
LINC00871-201ENST00000555246 FAM8A1Q9UBU6 413 aa5.28□□□□□ -1.56
LINC00871-201ENST00000555246 NXF1Q9UBU9 619 aaKnown RBP5.28□□□□□ -1.56
LINC00871-201ENST00000555246 USP25Q9UHP3 1055 aa5.28□□□□□ -1.56
LINC00871-201ENST00000555246 RCOR1Q9UKL0 485 aa5.28□□□□□ -1.56
LINC00871-201ENST00000555246 PCDHA7Q9UN72 937 aa5.28□□□□□ -1.56
LINC00871-201ENST00000555246 HPSEQ9Y251 543 aa5.28□□□□□ -1.56
LINC00871-201ENST00000555246 SLC27A6Q9Y2P4 619 aa5.28□□□□□ -1.56
LINC00871-201ENST00000555246 NEUROG3Q9Y4Z2 214 aa5.28□□□□□ -1.56
LINC00871-201ENST00000555246 PCDHA5Q9Y5H7 936 aa5.28□□□□□ -1.56
LINC00871-201ENST00000555246 LOC400499M0QZD8 3231 aa5.28□□□□□ -1.56
LINC00871-201ENST00000555246 CNOT1A5YKK6 2376 aaKnown RBP5.28□□□□□ -1.56
LINC00871-201ENST00000555246 IGHV1OR15-9A0A0B4J2B8 117 aa5.27□□□□□ -1.57
LINC00871-201ENST00000555246 A0A1B0GTH6 734 aa5.27□□□□□ -1.57
LINC00871-201ENST00000555246 A0A1W2PQD8 194 aa5.27□□□□□ -1.57
LINC00871-201ENST00000555246 TCRBV21S2A2A0A5A6 115 aa5.27□□□□□ -1.57
LINC00871-201ENST00000555246 ANTXRLA6NF34 631 aa5.27□□□□□ -1.57
LINC00871-201ENST00000555246 H0Y626 953 aa5.27□□□□□ -1.57
LINC00871-201ENST00000555246 EREGO14944 169 aa5.27□□□□□ -1.57
LINC00871-201ENST00000555246 CILPO75339 1184 aa5.27□□□□□ -1.57
LINC00871-201ENST00000555246 BEST1O76090 585 aa5.27□□□□□ -1.57
LINC00871-201ENST00000555246 RHOBTB3O94955 611 aa5.27□□□□□ -1.57
LINC00871-201ENST00000555246 TRIM16O95361 564 aa5.27□□□□□ -1.57
LINC00871-201ENST00000555246 F13A1P00488 732 aa5.27□□□□□ -1.57
LINC00871-201ENST00000555246 NR3C1P04150 777 aa5.27□□□□□ -1.57
LINC00871-201ENST00000555246 SERPINF2P08697 491 aa5.27□□□□□ -1.57
LINC00871-201ENST00000555246 FAM200BP0CF97 657 aa5.27□□□□□ -1.57
LINC00871-201ENST00000555246 ZSCAN22P10073 491 aaPredicted RBP5.27□□□□□ -1.57
LINC00871-201ENST00000555246 BMP2P12643 396 aa5.27□□□□□ -1.57
LINC00871-201ENST00000555246 HOXB2P14652 356 aa5.27□□□□□ -1.57
LINC00871-201ENST00000555246 ENGP17813 658 aa5.27□□□□□ -1.57
LINC00871-201ENST00000555246 ACO1P21399 889 aaKnown RBP5.27□□□□□ -1.57
LINC00871-201ENST00000555246 CMA1P23946 247 aa5.27□□□□□ -1.57
LINC00871-201ENST00000555246 DNAJA1P31689 397 aaKnown RBP5.27□□□□□ -1.57
LINC00871-201ENST00000555246 SLC6A11P48066 632 aa5.27□□□□□ -1.57
LINC00871-201ENST00000555246 PGFP49763 221 aa5.27□□□□□ -1.57
LINC00871-201ENST00000555246 KIF11P52732 1056 aa5.27□□□□□ -1.57
LINC00871-201ENST00000555246 NDST1P52848 882 aa5.27□□□□□ -1.57
LINC00871-201ENST00000555246 CDH8P55286 799 aa5.27□□□□□ -1.57
LINC00871-201ENST00000555246 PRR20EP86478 221 aa5.27□□□□□ -1.57
LINC00871-201ENST00000555246 PRR20CP86479 221 aa5.27□□□□□ -1.57
LINC00871-201ENST00000555246 PRR20DP86480 221 aa5.27□□□□□ -1.57
LINC00871-201ENST00000555246 PRR20BP86481 221 aa5.27□□□□□ -1.57
LINC00871-201ENST00000555246 PRR20AP86496 221 aa5.27□□□□□ -1.57
LINC00871-201ENST00000555246 TYRO3Q06418 890 aa5.27□□□□□ -1.57
LINC00871-201ENST00000555246 GOLGA8FQ08AF8 430 aa5.27□□□□□ -1.57
LINC00871-201ENST00000555246 GOLGA8DPQ0D2H9 430 aa5.27□□□□□ -1.57
LINC00871-201ENST00000555246 SLC14A1Q13336 389 aa5.27□□□□□ -1.57
LINC00871-201ENST00000555246 BIRC3Q13489 604 aa5.27□□□□□ -1.57
LINC00871-201ENST00000555246 HNRNPDQ14103 355 aaKnown RBP5.27□□□□□ -1.57
LINC00871-201ENST00000555246 EIF4HQ15056 248 aaKnown RBP5.27□□□□□ -1.57
LINC00871-201ENST00000555246 DUOXA1Q1HG43 343 aa5.27□□□□□ -1.57
LINC00871-201ENST00000555246 ZCWPW2Q504Y3 356 aa5.27□□□□□ -1.57
LINC00871-201ENST00000555246 C10orf76Q5T2E6 689 aa5.27□□□□□ -1.57
LINC00871-201ENST00000555246 C6orf118Q5T5N4 469 aa5.27□□□□□ -1.57
LINC00871-201ENST00000555246 BTBD8Q5XKL5 378 aa5.27□□□□□ -1.57
LINC00871-201ENST00000555246 NXPE4Q6UWF7 544 aa5.27□□□□□ -1.57
LINC00871-201ENST00000555246 INTS8Q75QN2 995 aaKnown RBP5.27□□□□□ -1.57
LINC00871-201ENST00000555246 SV2AQ7L0J3 742 aa5.27□□□□□ -1.57
LINC00871-201ENST00000555246 GPRIN1Q7Z2K8 1008 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms