RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 OR52L2PQ8NGH6 319 aa5.84□□□□□ -1.47
SYNE2-210ENST00000553455 MPP4Q96JB8 637 aa5.84□□□□□ -1.47
SYNE2-210ENST00000553455 MACROD1Q9BQ69 325 aa5.84□□□□□ -1.47
SYNE2-210ENST00000553455 ALG13Q9NP73 1137 aaKnown RBP5.84□□□□□ -1.47
SYNE2-210ENST00000553455 PI4KBQ9UBF8 816 aa5.84□□□□□ -1.47
SYNE2-210ENST00000553455 ST3GAL5Q9UNP4 418 aa5.84□□□□□ -1.47
SYNE2-210ENST00000553455 AGAP5A6NIR3 686 aa5.83□□□□□ -1.48
SYNE2-210ENST00000553455 PRRT4C9JH25 899 aa5.83□□□□□ -1.48
SYNE2-210ENST00000553455 J3KRW8 73 aa5.83□□□□□ -1.48
SYNE2-210ENST00000553455 MATN3O15232 486 aa5.83□□□□□ -1.48
SYNE2-210ENST00000553455 ADH4P08319 380 aa5.83□□□□□ -1.48
SYNE2-210ENST00000553455 CYP3A4P08684 503 aa5.83□□□□□ -1.48
SYNE2-210ENST00000553455 APEHP13798 732 aaKnown RBP5.83□□□□□ -1.48
SYNE2-210ENST00000553455 TUBP50607 506 aa5.83□□□□□ -1.48
SYNE2-210ENST00000553455 TAS2R50P59544 299 aa5.83□□□□□ -1.48
SYNE2-210ENST00000553455 CYP4F2P78329 520 aa5.83□□□□□ -1.48
SYNE2-210ENST00000553455 SIM1P81133 766 aaPredicted RBP5.83□□□□□ -1.48
SYNE2-210ENST00000553455 TLE3Q04726 772 aa5.83□□□□□ -1.48
SYNE2-210ENST00000553455 CCDC15Q0P6D6 951 aa5.83□□□□□ -1.48
SYNE2-210ENST00000553455 SLC4A8Q2Y0W8 1093 aa5.83□□□□□ -1.48
SYNE2-210ENST00000553455 TBC1D25Q3MII6 688 aa5.83□□□□□ -1.48
SYNE2-210ENST00000553455 LRRC24Q50LG9 513 aa5.83□□□□□ -1.48
SYNE2-210ENST00000553455 HECTD2Q5U5R9 776 aa5.83□□□□□ -1.48
SYNE2-210ENST00000553455 DENND2CQ68D51 928 aa5.83□□□□□ -1.48
SYNE2-210ENST00000553455 TMED8Q6PL24 325 aaPredicted RBP5.83□□□□□ -1.48
SYNE2-210ENST00000553455 CRIP3Q6Q6R5 217 aa5.83□□□□□ -1.48
SYNE2-210ENST00000553455 C12orf76Q8N812 135 aaPredicted RBP5.83□□□□□ -1.48
SYNE2-210ENST00000553455 NGDNQ8NEJ9 315 aaKnown RBP5.83□□□□□ -1.48
SYNE2-210ENST00000553455 HTRA1Q92743 480 aa5.83□□□□□ -1.48
SYNE2-210ENST00000553455 MMS19Q96T76 1030 aa5.83□□□□□ -1.48
SYNE2-210ENST00000553455 HERC2P3Q9BVR0 1158 aa5.83□□□□□ -1.48
SYNE2-210ENST00000553455 ELOVL1Q9BW60 279 aa5.83□□□□□ -1.48
SYNE2-210ENST00000553455 CINPQ9BW66 212 aaPredicted RBP5.83□□□□□ -1.48
SYNE2-210ENST00000553455 PLEKHA2Q9HB19 425 aa5.83□□□□□ -1.48
SYNE2-210ENST00000553455 USP29Q9HBJ7 922 aa5.83□□□□□ -1.48
SYNE2-210ENST00000553455 ABHD10Q9NUJ1 306 aa5.83□□□□□ -1.48
SYNE2-210ENST00000553455 TMLHEQ9NVH6 421 aa5.83□□□□□ -1.48
SYNE2-210ENST00000553455 FZD4Q9ULV1 537 aa5.83□□□□□ -1.48
SYNE2-210ENST00000553455 VPS4AQ9UN37 437 aa5.83□□□□□ -1.48
SYNE2-210ENST00000553455 SLC12A4Q9UP95 1085 aa5.83□□□□□ -1.48
SYNE2-210ENST00000553455 RRP7AQ9Y3A4 280 aaKnown RBP5.83□□□□□ -1.48
SYNE2-210ENST00000553455 GCOM1H8Y6P7 765 aaPredicted RBP5.82□□□□□ -1.48
SYNE2-210ENST00000553455 CSF1P09603 554 aa5.82□□□□□ -1.48
SYNE2-210ENST00000553455 MATN1P21941 496 aa5.82□□□□□ -1.48
SYNE2-210ENST00000553455 GRK5P34947 590 aa5.82□□□□□ -1.48
SYNE2-210ENST00000553455 PLA2G5P39877 138 aa5.82□□□□□ -1.48
SYNE2-210ENST00000553455 LIFRP42702 1097 aa5.82□□□□□ -1.48
SYNE2-210ENST00000553455 JAK3P52333 1124 aa5.82□□□□□ -1.48
SYNE2-210ENST00000553455 CBFBQ13951 182 aa5.82□□□□□ -1.48
SYNE2-210ENST00000553455 DLGAP5Q15398 846 aa5.82□□□□□ -1.48
SYNE2-210ENST00000553455 PCID2Q5JVF3 399 aa5.82□□□□□ -1.48
SYNE2-210ENST00000553455 SYNE3Q6ZMZ3 975 aa5.82□□□□□ -1.48
SYNE2-210ENST00000553455 BCDIN3DQ7Z5W3 292 aaKnown RBP5.82□□□□□ -1.48
SYNE2-210ENST00000553455 HEATR4Q86WZ0 1026 aa5.82□□□□□ -1.48
SYNE2-210ENST00000553455 ULK2Q8IYT8 1036 aa5.82□□□□□ -1.48
SYNE2-210ENST00000553455 FAM71DQ8N9W8 422 aa5.82□□□□□ -1.48
SYNE2-210ENST00000553455 CLEC4CQ8WTT0 213 aa5.82□□□□□ -1.48
SYNE2-210ENST00000553455 BBC3Q96PG8 261 aaPredicted RBP5.82□□□□□ -1.48
SYNE2-210ENST00000553455 REEP2Q9BRK0 252 aa5.82□□□□□ -1.48
SYNE2-210ENST00000553455 RMI1Q9H9A7 625 aa5.82□□□□□ -1.48
SYNE2-210ENST00000553455 NOD2Q9HC29 1040 aa5.82□□□□□ -1.48
SYNE2-210ENST00000553455 UBN1Q9NPG3 1134 aa5.82□□□□□ -1.48
SYNE2-210ENST00000553455 ASIC5Q9NY37 505 aa5.82□□□□□ -1.48
SYNE2-210ENST00000553455 SEMA5BQ9P283 1151 aa5.82□□□□□ -1.48
SYNE2-210ENST00000553455 SLC13A4Q9UKG4 626 aa5.82□□□□□ -1.48
SYNE2-210ENST00000553455 PCDHA10Q9Y5I2 948 aa5.82□□□□□ -1.48
SYNE2-210ENST00000553455 KAT7O95251 611 aa5.81□□□□□ -1.48
SYNE2-210ENST00000553455 FAM163BP0C2L3 166 aa5.81□□□□□ -1.48
SYNE2-210ENST00000553455 DUSP1P28562 367 aa5.81□□□□□ -1.48
SYNE2-210ENST00000553455 CXCR5P32302 372 aa5.81□□□□□ -1.48
SYNE2-210ENST00000553455 RCAN1P53805 252 aa5.81□□□□□ -1.48
SYNE2-210ENST00000553455 VAMP2P63027 116 aa5.81□□□□□ -1.48
SYNE2-210ENST00000553455 CFHR3Q02985 330 aa5.81□□□□□ -1.48
SYNE2-210ENST00000553455 GAB1Q13480 694 aa5.81□□□□□ -1.48
SYNE2-210ENST00000553455 TRPC3Q13507 836 aa5.81□□□□□ -1.48
SYNE2-210ENST00000553455 SIM2Q14190 667 aaPredicted RBP5.81□□□□□ -1.48
SYNE2-210ENST00000553455 CTXN3Q4LDR2 81 aa5.81□□□□□ -1.48
SYNE2-210ENST00000553455 RETSATQ6NUM9 610 aa5.81□□□□□ -1.48
SYNE2-210ENST00000553455 KIAA1324Q6UXG2 1013 aaKnown RBP5.81□□□□□ -1.48
SYNE2-210ENST00000553455 NAPRTQ6XQN6 538 aa5.81□□□□□ -1.48
SYNE2-210ENST00000553455 KYAT3Q6YP21 454 aaKnown RBP5.81□□□□□ -1.48
SYNE2-210ENST00000553455 PTGR2Q8N8N7 351 aaPredicted RBP5.81□□□□□ -1.48
SYNE2-210ENST00000553455 LINS1Q8NG48 757 aa5.81□□□□□ -1.48
SYNE2-210ENST00000553455 MAFAQ8NHW3 353 aaPredicted RBP5.81□□□□□ -1.48
SYNE2-210ENST00000553455 SLC9A6Q92581 669 aa5.81□□□□□ -1.48
SYNE2-210ENST00000553455 TBC1D5Q92609 795 aa5.81□□□□□ -1.48
SYNE2-210ENST00000553455 SEC62Q99442 399 aaKnown RBP5.81□□□□□ -1.48
SYNE2-210ENST00000553455 CIPCQ9C0C6 399 aa5.81□□□□□ -1.48
SYNE2-210ENST00000553455 GAR1Q9NY12 217 aaKnown RBP5.81□□□□□ -1.48
SYNE2-210ENST00000553455 BAG5Q9UL15 447 aa5.81□□□□□ -1.48
SYNE2-210ENST00000553455 TBC1D3DA0A087WVF3 549 aa5.8□□□□□ -1.48
SYNE2-210ENST00000553455 TBC1D3IA0A087WXS9 549 aa5.8□□□□□ -1.48
SYNE2-210ENST00000553455 TBC1D3EA0A087X179 549 aa5.8□□□□□ -1.48
SYNE2-210ENST00000553455 TBC1D3KA0A087X1G2 549 aa5.8□□□□□ -1.48
SYNE2-210ENST00000553455 VWA3AA6NCI4 1184 aa5.8□□□□□ -1.48
SYNE2-210ENST00000553455 TBC1D3BA6NDS4 549 aa5.8□□□□□ -1.48
SYNE2-210ENST00000553455 TBC1D3FA6NER0 549 aaPredicted RBP5.8□□□□□ -1.48
SYNE2-210ENST00000553455 A6NLC8 198 aa5.8□□□□□ -1.48
SYNE2-210ENST00000553455 TBC1D3LB9A6J9 549 aa5.8□□□□□ -1.48
SYNE2-210ENST00000553455 ORC4O43929 436 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms