RNA–Protein interactions for RNA: ENST00000543982.5

XRCC1-202, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2 BASIC

Gene XRCC1, Length 1,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-202ENST00000543982 RNF34Q969K3 372 aa16.54■□□□□ 0.24
XRCC1-202ENST00000543982 ZFRQ96KR1 1074 aaKnown RBP16.54■□□□□ 0.24
XRCC1-202ENST00000543982 NAP1L3Q99457 506 aaPredicted RBP16.54■□□□□ 0.24
XRCC1-202ENST00000543982 TRIM62Q9BVG3 475 aa16.54■□□□□ 0.24
XRCC1-202ENST00000543982 APOL5Q9BWW9 433 aa16.54■□□□□ 0.24
XRCC1-202ENST00000543982 ETNK2Q9NVF9 386 aa16.54■□□□□ 0.24
XRCC1-202ENST00000543982 MOCS2O96007 188 aaPredicted RBP16.53■□□□□ 0.24
XRCC1-202ENST00000543982 IGLV3-27P01718 113 aa16.53■□□□□ 0.24
XRCC1-202ENST00000543982 GOT1P17174 413 aa16.53■□□□□ 0.24
XRCC1-202ENST00000543982 TBX4P57082 545 aa16.53■□□□□ 0.24
XRCC1-202ENST00000543982 SEMA3BQ13214 749 aa16.53■□□□□ 0.24
XRCC1-202ENST00000543982 ADGRE1Q14246 886 aa16.53■□□□□ 0.24
XRCC1-202ENST00000543982 LRIT3Q3SXY7 679 aa16.53■□□□□ 0.24
XRCC1-202ENST00000543982 CCDC70Q6NSX1 233 aa16.53■□□□□ 0.24
XRCC1-202ENST00000543982 GRASPQ7Z6J2 395 aaPredicted RBP16.53■□□□□ 0.24
XRCC1-202ENST00000543982 C14orf80Q86SX3 495 aa16.53■□□□□ 0.24
XRCC1-202ENST00000543982 ADAMTS19Q8TE59 1207 aa16.53■□□□□ 0.24
XRCC1-202ENST00000543982 ATG4AQ8WYN0 398 aa16.53■□□□□ 0.24
XRCC1-202ENST00000543982 NTAN1Q96AB6 310 aa16.53■□□□□ 0.24
XRCC1-202ENST00000543982 MYEOVQ96EZ4 313 aa16.53■□□□□ 0.24
XRCC1-202ENST00000543982 RBM41Q96IZ5 413 aaKnown RBP16.53■□□□□ 0.24
XRCC1-202ENST00000543982 TRPC7Q9HCX4 862 aa16.53■□□□□ 0.24
XRCC1-202ENST00000543982 TLR6Q9Y2C9 796 aa16.53■□□□□ 0.24
XRCC1-202ENST00000543982 SCAMP3O14828 347 aaKnown RBP16.53■□□□□ 0.24
XRCC1-202ENST00000543982 PAGE1O75459 146 aa16.53■□□□□ 0.24
XRCC1-202ENST00000543982 C1RP00736 705 aa16.53■□□□□ 0.24
XRCC1-202ENST00000543982 KLKB1P03952 638 aa16.53■□□□□ 0.24
XRCC1-202ENST00000543982 RHOP08100 348 aa16.53■□□□□ 0.24
XRCC1-202ENST00000543982 GBP1P32455 592 aa16.53■□□□□ 0.24
XRCC1-202ENST00000543982 ATP5C1P36542 298 aaKnown RBP16.53■□□□□ 0.24
XRCC1-202ENST00000543982 DYNLT1P63172 113 aa16.53■□□□□ 0.24
XRCC1-202ENST00000543982 SCAPQ12770 1279 aa16.53■□□□□ 0.24
XRCC1-202ENST00000543982 KRT81Q14533 505 aa16.53■□□□□ 0.24
XRCC1-202ENST00000543982 TRIP4Q15650 581 aaPredicted RBP16.53■□□□□ 0.24
XRCC1-202ENST00000543982 TFDP3Q5H9I0 405 aa16.53■□□□□ 0.24
XRCC1-202ENST00000543982 FBXO38Q6PIJ6 1188 aa16.53■□□□□ 0.24
XRCC1-202ENST00000543982 TMC5Q6UXY8 1006 aa16.53■□□□□ 0.24
XRCC1-202ENST00000543982 ZNF276Q8N554 614 aa16.53■□□□□ 0.24
XRCC1-202ENST00000543982 MAB21L3Q8N8X9 362 aa16.53■□□□□ 0.24
XRCC1-202ENST00000543982 C1orf54Q8WWF1 131 aa16.53■□□□□ 0.24
XRCC1-202ENST00000543982 HAUS1Q96CS2 278 aa16.53■□□□□ 0.24
XRCC1-202ENST00000543982 SERPINB11Q96P15 392 aa16.53■□□□□ 0.24
XRCC1-202ENST00000543982 HINFPQ9BQA5 517 aa16.53■□□□□ 0.24
XRCC1-202ENST00000543982 KLF16Q9BXK1 252 aaPredicted RBP16.53■□□□□ 0.24
XRCC1-202ENST00000543982 SLC46A2Q9BY10 475 aa16.53■□□□□ 0.24
XRCC1-202ENST00000543982 PRKD2Q9BZL6 878 aa16.53■□□□□ 0.24
XRCC1-202ENST00000543982 SIK2Q9H0K1 926 aa16.53■□□□□ 0.24
XRCC1-202ENST00000543982 SMG9Q9H0W8 520 aaKnown RBP16.53■□□□□ 0.24
XRCC1-202ENST00000543982 ATXN3LQ9H3M9 355 aa16.53■□□□□ 0.24
XRCC1-202ENST00000543982 ARGLU1Q9NWB6 273 aaPredicted RBP16.53■□□□□ 0.24
XRCC1-202ENST00000543982 SMPD4Q9NXE4 827 aa16.53■□□□□ 0.24
XRCC1-202ENST00000543982 UXTQ9UBK9 157 aaPredicted RBP16.53■□□□□ 0.24
XRCC1-202ENST00000543982 DNMT3LQ9UJW3 386 aa16.53■□□□□ 0.24
XRCC1-202ENST00000543982 XIRP2A4UGR9 3374 aa16.53■□□□□ 0.24
XRCC1-202ENST00000543982 GOLGA6L7A0A1B0GV03 622 aa16.52■□□□□ 0.24
XRCC1-202ENST00000543982 TARSL2A2RTX5 802 aaKnown RBP16.52■□□□□ 0.24
XRCC1-202ENST00000543982 KRIT1O00522 736 aa16.52■□□□□ 0.24
XRCC1-202ENST00000543982 AMPD1P23109 780 aa16.52■□□□□ 0.24
XRCC1-202ENST00000543982 EPHA5P54756 1037 aa16.52■□□□□ 0.24
XRCC1-202ENST00000543982 GLE1Q53GS7 698 aaKnown RBP16.52■□□□□ 0.24
XRCC1-202ENST00000543982 ANKRD20A8PQ5CZ79 823 aa16.52■□□□□ 0.24
XRCC1-202ENST00000543982 PIK3R6Q5UE93 754 aa16.52■□□□□ 0.24
XRCC1-202ENST00000543982 TTC27Q6P3X3 843 aa16.52■□□□□ 0.24
XRCC1-202ENST00000543982 NPNTQ6UXI9 565 aa16.52■□□□□ 0.24
XRCC1-202ENST00000543982 B4GALNT4Q76KP1 1039 aa16.52■□□□□ 0.24
XRCC1-202ENST00000543982 CSPG4P5Q96PW8 444 aa16.52■□□□□ 0.24
XRCC1-202ENST00000543982 RNF157Q96PX1 679 aa16.52■□□□□ 0.24
XRCC1-202ENST00000543982 NCAPGQ9BPX3 1015 aa16.52■□□□□ 0.24
XRCC1-202ENST00000543982 LRRC1Q9BTT6 524 aa16.52■□□□□ 0.24
XRCC1-202ENST00000543982 RAB21Q9UL25 225 aa16.52■□□□□ 0.24
XRCC1-202ENST00000543982 NEU3Q9UQ49 428 aa16.52■□□□□ 0.24
XRCC1-202ENST00000543982 EYSQ5T1H1 3165 aa16.52■□□□□ 0.23
XRCC1-202ENST00000543982 CCDC188H7C350 402 aa16.51■□□□□ 0.23
XRCC1-202ENST00000543982 CREB3O43889 395 aa16.51■□□□□ 0.23
XRCC1-202ENST00000543982 DESP17661 470 aa16.51■□□□□ 0.23
XRCC1-202ENST00000543982 HOXA9P31269 272 aa16.51■□□□□ 0.23
XRCC1-202ENST00000543982 CCR1P32246 355 aa16.51■□□□□ 0.23
XRCC1-202ENST00000543982 PTPN7P35236 360 aa16.51■□□□□ 0.23
XRCC1-202ENST00000543982 IRAK1P51617 712 aa16.51■□□□□ 0.23
XRCC1-202ENST00000543982 PDK2Q15119 407 aa16.51■□□□□ 0.23
XRCC1-202ENST00000543982 NADSYN1Q6IA69 706 aa16.51■□□□□ 0.23
XRCC1-202ENST00000543982 SND1Q7KZF4 910 aaKnown RBP eCLIP16.51■□□□□ 0.23
XRCC1-202ENST00000543982 HDAC7Q8WUI4 952 aa16.51■□□□□ 0.23
XRCC1-202ENST00000543982 LRRN4Q8WUT4 740 aa16.51■□□□□ 0.23
XRCC1-202ENST00000543982 FAF2Q96CS3 445 aa16.51■□□□□ 0.23
XRCC1-202ENST00000543982 PNKPQ96T60 521 aa16.51■□□□□ 0.23
XRCC1-202ENST00000543982 DDX47Q9H0S4 455 aaKnown RBP16.51■□□□□ 0.23
XRCC1-202ENST00000543982 C10orf88Q9H8K7 445 aa16.51■□□□□ 0.23
XRCC1-202ENST00000543982 ASAH2Q9NR71 780 aa16.51■□□□□ 0.23
XRCC1-202ENST00000543982 OLA1Q9NTK5 396 aaKnown RBP16.51■□□□□ 0.23
XRCC1-202ENST00000543982 HS3ST4Q9Y661 456 aa16.51■□□□□ 0.23
XRCC1-202ENST00000543982 CST8O60676 142 aa16.51■□□□□ 0.23
XRCC1-202ENST00000543982 MAP3K6O95382 1288 aa16.51■□□□□ 0.23
XRCC1-202ENST00000543982 HNRNPA1P09651 372 aaKnown RBP eCLIP16.51■□□□□ 0.23
XRCC1-202ENST00000543982 PECAM1P16284 738 aaPredicted RBP16.51■□□□□ 0.23
XRCC1-202ENST00000543982 PTPN2P17706 415 aa16.51■□□□□ 0.23
XRCC1-202ENST00000543982 COPS2P61201 443 aa16.51■□□□□ 0.23
XRCC1-202ENST00000543982 PPP2R5DQ14738 602 aa16.51■□□□□ 0.23
XRCC1-202ENST00000543982 TEAD2Q15562 447 aa16.51■□□□□ 0.23
XRCC1-202ENST00000543982 PPP2R5EQ16537 467 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms