RNA–Protein interactions for RNA: ENST00000528910.5

USP35-202, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 1,209 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-202ENST00000528910 PDCL3Q9H2J4 239 aa18.05■□□□□ 0.48
USP35-202ENST00000528910 SYNCQ9H7C4 482 aa18.05■□□□□ 0.48
USP35-202ENST00000528910 PLK2Q9NYY3 685 aa18.05■□□□□ 0.48
USP35-202ENST00000528910 A0A1W2PQC6 194 aa18.04■□□□□ 0.48
USP35-202ENST00000528910 TBC1D3BA6NDS4 549 aa18.04■□□□□ 0.48
USP35-202ENST00000528910 ACSL4O60488 711 aa18.04■□□□□ 0.48
USP35-202ENST00000528910 LMNAP02545 664 aaKnown RBP18.04■□□□□ 0.48
USP35-202ENST00000528910 CYP1A1P04798 512 aaPredicted RBP18.04■□□□□ 0.48
USP35-202ENST00000528910 CHRNB2P17787 502 aa18.04■□□□□ 0.48
USP35-202ENST00000528910 HOXD9P28356 352 aaPredicted RBP18.04■□□□□ 0.48
USP35-202ENST00000528910 SLC11A2P49281 568 aa18.04■□□□□ 0.48
USP35-202ENST00000528910 FNTBP49356 437 aa18.04■□□□□ 0.48
USP35-202ENST00000528910 PITX1P78337 314 aaPredicted RBP18.04■□□□□ 0.48
USP35-202ENST00000528910 MPPE1Q53F39 396 aa18.04■□□□□ 0.48
USP35-202ENST00000528910 C2orf27AQ580R0 203 aa18.04■□□□□ 0.48
USP35-202ENST00000528910 NADSYN1Q6IA69 706 aa18.04■□□□□ 0.48
USP35-202ENST00000528910 OR6B2Q6IFH4 312 aa18.04■□□□□ 0.48
USP35-202ENST00000528910 TRIM72Q6ZMU5 477 aa18.04■□□□□ 0.48
USP35-202ENST00000528910 NUDT18Q6ZVK8 323 aa18.04■□□□□ 0.48
USP35-202ENST00000528910 LUZP1Q86V48 1076 aa18.04■□□□□ 0.48
USP35-202ENST00000528910 DEFB106AQ8N104 65 aa18.04■□□□□ 0.48
USP35-202ENST00000528910 ALLCQ8N6M5 410 aa18.04■□□□□ 0.48
USP35-202ENST00000528910 SUMF1Q8NBK3 374 aa18.04■□□□□ 0.48
USP35-202ENST00000528910 ADAM32Q8TC27 787 aa18.04■□□□□ 0.48
USP35-202ENST00000528910 HHIPQ96QV1 700 aa18.04■□□□□ 0.48
USP35-202ENST00000528910 SLC2A11Q9BYW1 496 aa18.04■□□□□ 0.48
USP35-202ENST00000528910 POLR3BQ9NW08 1133 aaPredicted RBP18.04■□□□□ 0.48
USP35-202ENST00000528910 HCN2Q9UL51 889 aa18.04■□□□□ 0.48
USP35-202ENST00000528910 DMDP11532 3685 aa18.04■□□□□ 0.48
USP35-202ENST00000528910 PRRT4C9JH25 899 aa18.03■□□□□ 0.48
USP35-202ENST00000528910 APBB3O95704 486 aa18.03■□□□□ 0.48
USP35-202ENST00000528910 SLC6A4P31645 630 aa18.03■□□□□ 0.48
USP35-202ENST00000528910 CNR2P34972 360 aa18.03■□□□□ 0.48
USP35-202ENST00000528910 TIE1P35590 1138 aa18.03■□□□□ 0.48
USP35-202ENST00000528910 FILIP1LQ4L180 1135 aa18.03■□□□□ 0.48
USP35-202ENST00000528910 DCAF6Q58WW2 860 aa18.03■□□□□ 0.48
USP35-202ENST00000528910 MPP7Q5T2T1 576 aa18.03■□□□□ 0.48
USP35-202ENST00000528910 OTUD1Q5VV17 481 aaPredicted RBP18.03■□□□□ 0.48
USP35-202ENST00000528910 NAA35Q5VZE5 725 aa18.03■□□□□ 0.48
USP35-202ENST00000528910 TRMT11Q7Z4G4 463 aaKnown RBP18.03■□□□□ 0.48
USP35-202ENST00000528910 XYLT1Q86Y38 959 aa18.03■□□□□ 0.48
USP35-202ENST00000528910 MSANTD4Q8NCY6 345 aa18.03■□□□□ 0.48
USP35-202ENST00000528910 C18orf8Q96DM3 657 aa18.03■□□□□ 0.48
USP35-202ENST00000528910 PRICKLE1Q96MT3 831 aaPredicted RBP18.03■□□□□ 0.48
USP35-202ENST00000528910 MYO6Q9UM54 1294 aa18.03■□□□□ 0.48
USP35-202ENST00000528910 NYNRINQ9P2P1 1898 aaKnown RBP18.03■□□□□ 0.48
USP35-202ENST00000528910 RIF1Q5UIP0 2472 aaKnown RBP18.03■□□□□ 0.48
USP35-202ENST00000528910 ZFHX2Q9C0A1 2572 aaPredicted RBP18.02■□□□□ 0.48
USP35-202ENST00000528910 GPR179Q6PRD1 2367 aa18.02■□□□□ 0.48
USP35-202ENST00000528910 SGK1O00141 431 aa18.02■□□□□ 0.48
USP35-202ENST00000528910 ADAM23O75077 832 aa18.02■□□□□ 0.48
USP35-202ENST00000528910 GRAP2O75791 330 aa18.02■□□□□ 0.48
USP35-202ENST00000528910 KLF8O95600 359 aaPredicted RBP18.02■□□□□ 0.48
USP35-202ENST00000528910 APOEP02649 317 aa18.02■□□□□ 0.48
USP35-202ENST00000528910 CDK17Q00537 523 aa18.02■□□□□ 0.48
USP35-202ENST00000528910 CRY1Q16526 586 aa18.02■□□□□ 0.48
USP35-202ENST00000528910 EOGTQ5NDL2 527 aa18.02■□□□□ 0.48
USP35-202ENST00000528910 EMC10Q5UCC4 262 aa18.02■□□□□ 0.48
USP35-202ENST00000528910 PIK3R6Q5UE93 754 aa18.02■□□□□ 0.48
USP35-202ENST00000528910 ANKS1BQ7Z6G8 1248 aa18.02■□□□□ 0.48
USP35-202ENST00000528910 RASSF3Q86WH2 238 aa18.02■□□□□ 0.48
USP35-202ENST00000528910 ERICH1Q86X53 443 aa18.02■□□□□ 0.48
USP35-202ENST00000528910 CCDC33Q8N5R6 958 aa18.02■□□□□ 0.48
USP35-202ENST00000528910 ZNF513Q8N8E2 541 aaPredicted RBP18.02■□□□□ 0.48
USP35-202ENST00000528910 TXNDC5Q8NBS9 432 aaKnown RBP18.02■□□□□ 0.48
USP35-202ENST00000528910 DDI1Q8WTU0 396 aa18.02■□□□□ 0.48
USP35-202ENST00000528910 BAP1Q92560 729 aa18.02■□□□□ 0.48
USP35-202ENST00000528910 FAM204AQ9H8W3 233 aa18.02■□□□□ 0.48
USP35-202ENST00000528910 EBF1Q9UH73 591 aa18.02■□□□□ 0.48
USP35-202ENST00000528910 CLEC4EQ9ULY5 219 aa18.02■□□□□ 0.48
USP35-202ENST00000528910 SMG5Q9UPR3 1016 aaKnown RBP18.02■□□□□ 0.48
USP35-202ENST00000528910 GVINP1Q7Z2Y8 2422 aa18.01■□□□□ 0.47
USP35-202ENST00000528910 UNGP13051 313 aaPredicted RBP18.01■□□□□ 0.47
USP35-202ENST00000528910 HNRNPLP14866 589 aaKnown RBP eCLIP18.01■□□□□ 0.47
USP35-202ENST00000528910 MMP8P22894 467 aa18.01■□□□□ 0.47
USP35-202ENST00000528910 NOS2P35228 1153 aa18.01■□□□□ 0.47
USP35-202ENST00000528910 MATKP42679 507 aa18.01■□□□□ 0.47
USP35-202ENST00000528910 SGSHP51688 502 aa18.01■□□□□ 0.47
USP35-202ENST00000528910 DGKEP52429 567 aa18.01■□□□□ 0.47
USP35-202ENST00000528910 TPM4P67936 248 aa18.01■□□□□ 0.47
USP35-202ENST00000528910 CENPCQ03188 943 aa18.01■□□□□ 0.47
USP35-202ENST00000528910 EIF4HQ15056 248 aaKnown RBP18.01■□□□□ 0.47
USP35-202ENST00000528910 GEN1Q17RS7 908 aa18.01■□□□□ 0.47
USP35-202ENST00000528910 EGFLAMQ63HQ2 1017 aa18.01■□□□□ 0.47
USP35-202ENST00000528910 HEATR6Q6AI08 1181 aaKnown RBP18.01■□□□□ 0.47
USP35-202ENST00000528910 ARCQ7LC44 396 aa18.01■□□□□ 0.47
USP35-202ENST00000528910 CACNA2D4Q7Z3S7 1137 aa18.01■□□□□ 0.47
USP35-202ENST00000528910 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.01■□□□□ 0.47
USP35-202ENST00000528910 TSTD1Q8NFU3 115 aa18.01■□□□□ 0.47
USP35-202ENST00000528910 BTN2A3PQ96KV6 586 aa18.01■□□□□ 0.47
USP35-202ENST00000528910 NAP1L5Q96NT1 182 aaPredicted RBP18.01■□□□□ 0.47
USP35-202ENST00000528910 NPY6RQ99463 290 aa18.01■□□□□ 0.47
USP35-202ENST00000528910 DDX50Q9BQ39 737 aaKnown RBP18.01■□□□□ 0.47
USP35-202ENST00000528910 TTYH3Q9C0H2 523 aa18.01■□□□□ 0.47
USP35-202ENST00000528910 DDIT4Q9NX09 232 aa18.01■□□□□ 0.47
USP35-202ENST00000528910 RRN3Q9NYV6 651 aa18.01■□□□□ 0.47
USP35-202ENST00000528910 KCNU1A8MYU2 1149 aa18■□□□□ 0.47
USP35-202ENST00000528910 SLC2A3P11169 496 aa18■□□□□ 0.47
USP35-202ENST00000528910 FERP16591 822 aa18■□□□□ 0.47
USP35-202ENST00000528910 GSCP56915 257 aaPredicted RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms