RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 A8MXQ7 604 aa18.37■□□□□ 0.53
PVT1-220ENST00000524165 BNIP3Q12983 259 aa18.37■□□□□ 0.53
PVT1-220ENST00000524165 SURF1Q15526 300 aa18.37■□□□□ 0.53
PVT1-220ENST00000524165 C6orf132Q5T0Z8 1188 aa18.37■□□□□ 0.53
PVT1-220ENST00000524165 L1TD1Q5T7N2 865 aaKnown RBP18.37■□□□□ 0.53
PVT1-220ENST00000524165 ARL6IP4Q66PJ3 421 aaKnown RBP18.37■□□□□ 0.53
PVT1-220ENST00000524165 TMEM215Q68D42 235 aa18.37■□□□□ 0.53
PVT1-220ENST00000524165 IGF2-ASQ6U949 168 aa18.37■□□□□ 0.53
PVT1-220ENST00000524165 DYMQ7RTS9 669 aa18.37■□□□□ 0.53
PVT1-220ENST00000524165 RAD54LQ92698 747 aa18.37■□□□□ 0.53
PVT1-220ENST00000524165 GOLGA1Q92805 767 aa18.37■□□□□ 0.53
PVT1-220ENST00000524165 SMARCD1Q96GM5 515 aa18.37■□□□□ 0.53
PVT1-220ENST00000524165 VCPIP1Q96JH7 1222 aa18.37■□□□□ 0.53
PVT1-220ENST00000524165 LLPHQ9BRT6 129 aaKnown RBP18.37■□□□□ 0.53
PVT1-220ENST00000524165 SLC2A11Q9BYW1 496 aa18.37■□□□□ 0.53
PVT1-220ENST00000524165 USP9YO00507 2555 aaPredicted RBP18.37■□□□□ 0.53
PVT1-220ENST00000524165 A0A1W2PR77 199 aa18.36■□□□□ 0.53
PVT1-220ENST00000524165 STC2O76061 302 aa18.36■□□□□ 0.53
PVT1-220ENST00000524165 PRPF6O94906 941 aaKnown RBP18.36■□□□□ 0.53
PVT1-220ENST00000524165 AFPP02771 609 aaKnown RBP18.36■□□□□ 0.53
PVT1-220ENST00000524165 DDIT3P35638 169 aa18.36■□□□□ 0.53
PVT1-220ENST00000524165 ASIC1P78348 528 aa18.36■□□□□ 0.53
PVT1-220ENST00000524165 CDCP2Q5VXM1 449 aa18.36■□□□□ 0.53
PVT1-220ENST00000524165 PAQR9Q6ZVX9 377 aa18.36■□□□□ 0.53
PVT1-220ENST00000524165 USP30Q70CQ3 517 aa18.36■□□□□ 0.53
PVT1-220ENST00000524165 SFR1Q86XK3 245 aa18.36■□□□□ 0.53
PVT1-220ENST00000524165 EXD3Q8N9H8 876 aa18.36■□□□□ 0.53
PVT1-220ENST00000524165 CCDC97Q96F63 343 aaPredicted RBP18.36■□□□□ 0.53
PVT1-220ENST00000524165 AASDHPPTQ9NRN7 309 aa18.36■□□□□ 0.53
PVT1-220ENST00000524165 STARD5Q9NSY2 213 aa18.36■□□□□ 0.53
PVT1-220ENST00000524165 SEL1LQ9UBV2 794 aa18.36■□□□□ 0.53
PVT1-220ENST00000524165 SUV39H1O43463 412 aa18.35■□□□□ 0.53
PVT1-220ENST00000524165 USP12O75317 370 aa18.35■□□□□ 0.53
PVT1-220ENST00000524165 NXPH1P58417 271 aa18.35■□□□□ 0.53
PVT1-220ENST00000524165 TNNC1P63316 161 aa18.35■□□□□ 0.53
PVT1-220ENST00000524165 SKOR1P84550 965 aa18.35■□□□□ 0.53
PVT1-220ENST00000524165 CCDC81Q6ZN84 652 aa18.35■□□□□ 0.53
PVT1-220ENST00000524165 GPD1LQ8N335 351 aa18.35■□□□□ 0.53
PVT1-220ENST00000524165 DEPDC7Q96QD5 511 aa18.35■□□□□ 0.53
PVT1-220ENST00000524165 CBWD1Q9BRT8 395 aa18.35■□□□□ 0.53
PVT1-220ENST00000524165 MED10Q9BTT4 135 aa18.35■□□□□ 0.53
PVT1-220ENST00000524165 MRPL44Q9H9J2 332 aaKnown RBP18.35■□□□□ 0.53
PVT1-220ENST00000524165 EBF2Q9HAK2 575 aa18.35■□□□□ 0.53
PVT1-220ENST00000524165 OSER1Q9NX31 292 aa18.35■□□□□ 0.53
PVT1-220ENST00000524165 SCML1Q9UN30 329 aa18.35■□□□□ 0.53
PVT1-220ENST00000524165 NCKAP1Q9Y2A7 1128 aa18.35■□□□□ 0.53
PVT1-220ENST00000524165 BSNQ9UPA5 3926 aa18.34■□□□□ 0.53
PVT1-220ENST00000524165 NBPF19A0A087WUL8 3843 aa18.34■□□□□ 0.53
PVT1-220ENST00000524165 AP1G2O75843 785 aa18.34■□□□□ 0.53
PVT1-220ENST00000524165 KLKB1P03952 638 aa18.34■□□□□ 0.53
PVT1-220ENST00000524165 CYBBP04839 570 aa18.34■□□□□ 0.53
PVT1-220ENST00000524165 UBA7P41226 1012 aa18.34■□□□□ 0.53
PVT1-220ENST00000524165 GALCP54803 685 aa18.34■□□□□ 0.53
PVT1-220ENST00000524165 PDE4CQ08493 712 aa18.34■□□□□ 0.53
PVT1-220ENST00000524165 SERINC3Q13530 473 aa18.34■□□□□ 0.53
PVT1-220ENST00000524165 UBAP2LQ14157 1087 aaKnown RBP18.34■□□□□ 0.53
PVT1-220ENST00000524165 WDR72Q3MJ13 1102 aa18.34■□□□□ 0.53
PVT1-220ENST00000524165 FNDC3BQ53EP0 1204 aaKnown RBP18.34■□□□□ 0.53
PVT1-220ENST00000524165 TRAPPC11Q7Z392 1133 aa18.34■□□□□ 0.53
PVT1-220ENST00000524165 WDR49Q8IV35 697 aa18.34■□□□□ 0.53
PVT1-220ENST00000524165 NOC3LQ8WTT2 800 aaKnown RBP18.34■□□□□ 0.53
PVT1-220ENST00000524165 LARP4BQ92615 738 aaKnown RBP18.34■□□□□ 0.53
PVT1-220ENST00000524165 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.34■□□□□ 0.531e-6■□□□□ 9.2
PVT1-220ENST00000524165 PRSS16Q9NQE7 514 aa18.34■□□□□ 0.53
PVT1-220ENST00000524165 CLEC4EQ9ULY5 219 aa18.34■□□□□ 0.53
PVT1-220ENST00000524165 PLA2G4CQ9UP65 541 aa18.34■□□□□ 0.53
PVT1-220ENST00000524165 C10orf142B7Z368 130 aa18.33■□□□□ 0.52
PVT1-220ENST00000524165 TLR4O00206 839 aa18.33■□□□□ 0.52
PVT1-220ENST00000524165 KIAA0391O15091 583 aaKnown RBP18.33■□□□□ 0.52
PVT1-220ENST00000524165 CST3P01034 146 aaPredicted RBP18.33■□□□□ 0.52
PVT1-220ENST00000524165 HMGN5P82970 282 aaKnown RBP18.33■□□□□ 0.52
PVT1-220ENST00000524165 SLC45A4Q5BKX6 768 aa18.33■□□□□ 0.52
PVT1-220ENST00000524165 RILPL1Q5EBL4 403 aa18.33■□□□□ 0.52
PVT1-220ENST00000524165 ZNF776Q68DI1 518 aaPredicted RBP18.33■□□□□ 0.52
PVT1-220ENST00000524165 SYCP3Q8IZU3 236 aa18.33■□□□□ 0.52
PVT1-220ENST00000524165 ZMIZ2Q8NF64 920 aa18.33■□□□□ 0.52
PVT1-220ENST00000524165 DCLK3Q9C098 648 aa18.33■□□□□ 0.52
PVT1-220ENST00000524165 PCIF1Q9H4Z3 704 aa18.33■□□□□ 0.52
PVT1-220ENST00000524165 CSNK1G1Q9HCP0 422 aa18.33■□□□□ 0.52
PVT1-220ENST00000524165 KRT82Q9NSB4 513 aa18.33■□□□□ 0.52
PVT1-220ENST00000524165 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.33■□□□□ 0.52
PVT1-220ENST00000524165 SEPT3Q9UH03 358 aa18.33■□□□□ 0.52
PVT1-220ENST00000524165 SCML2Q9UQR0 700 aa18.33■□□□□ 0.52
PVT1-220ENST00000524165 CREBBPQ92793 2442 aa18.33■□□□□ 0.52
PVT1-220ENST00000524165 FAM47DPA6NHR8 397 aa18.32■□□□□ 0.52
PVT1-220ENST00000524165 ZNF233A6NK53 670 aa18.32■□□□□ 0.52
PVT1-220ENST00000524165 MDM4O15151 490 aa18.32■□□□□ 0.52
PVT1-220ENST00000524165 RARGP13631 454 aa18.32■□□□□ 0.52
PVT1-220ENST00000524165 ZNF211Q13398 564 aaPredicted RBP18.32■□□□□ 0.52
PVT1-220ENST00000524165 ARL13BQ3SXY8 428 aa18.32■□□□□ 0.52
PVT1-220ENST00000524165 NCEH1Q6PIU2 408 aa18.32■□□□□ 0.52
PVT1-220ENST00000524165 FUKQ8N0W3 1084 aa18.32■□□□□ 0.52
PVT1-220ENST00000524165 ZNF276Q8N554 614 aa18.32■□□□□ 0.52
PVT1-220ENST00000524165 ZNF366Q8N895 744 aa18.32■□□□□ 0.52
PVT1-220ENST00000524165 FAM184AQ8NB25 1140 aa18.32■□□□□ 0.52
PVT1-220ENST00000524165 TNIP3Q96KP6 325 aa18.32■□□□□ 0.52
PVT1-220ENST00000524165 SMOQ99835 787 aa18.32■□□□□ 0.52
PVT1-220ENST00000524165 PABPC3Q9H361 631 aaKnown RBP18.32■□□□□ 0.52
PVT1-220ENST00000524165 TPX2Q9ULW0 747 aaKnown RBP18.32■□□□□ 0.52
PVT1-220ENST00000524165 PCDHB13Q9Y5F0 798 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms