RNA–Protein interactions for RNA: ENST00000524126.5

SPIDR-224, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 1 (best)

Gene SPIDR, Length 2,614 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-224ENST00000524126 ZC3H7AQ8IWR0 971 aaKnown RBP10.49□□□□□ -0.73
SPIDR-224ENST00000524126 TMEM102Q8N9M5 508 aaPredicted RBP10.49□□□□□ -0.73
SPIDR-224ENST00000524126 ZSCAN18Q8TBC5 510 aaPredicted RBP10.49□□□□□ -0.73
SPIDR-224ENST00000524126 CPT1BQ92523 772 aa10.49□□□□□ -0.73
SPIDR-224ENST00000524126 KCNK16Q96T55 309 aa10.49□□□□□ -0.73
SPIDR-224ENST00000524126 CXorf21Q9HAI6 301 aa10.49□□□□□ -0.73
SPIDR-224ENST00000524126 PNPOQ9NVS9 261 aa10.49□□□□□ -0.73
SPIDR-224ENST00000524126 SAE1Q9UBE0 346 aaPredicted RBP10.49□□□□□ -0.73
SPIDR-224ENST00000524126 CFLARO15519 480 aa10.49□□□□□ -0.73
SPIDR-224ENST00000524126 AKR1B1P15121 316 aa10.49□□□□□ -0.73
SPIDR-224ENST00000524126 NRLP54845 237 aa10.49□□□□□ -0.73
SPIDR-224ENST00000524126 ESRRGP62508 458 aa10.49□□□□□ -0.73
SPIDR-224ENST00000524126 SELENBP1Q13228 472 aa10.49□□□□□ -0.73
SPIDR-224ENST00000524126 PMS2P3Q13401 168 aa10.49□□□□□ -0.73
SPIDR-224ENST00000524126 PICALMQ13492 652 aa10.49□□□□□ -0.73
SPIDR-224ENST00000524126 USP17L6PQ6QN14 398 aa10.49□□□□□ -0.73
SPIDR-224ENST00000524126 GET4Q7L5D6 327 aaPredicted RBP10.49□□□□□ -0.73
SPIDR-224ENST00000524126 DSG4Q86SJ6 1040 aa10.49□□□□□ -0.73
SPIDR-224ENST00000524126 BPHLQ86WA6 291 aaPredicted RBP10.49□□□□□ -0.73
SPIDR-224ENST00000524126 FAM71AQ8IYT1 594 aa10.49□□□□□ -0.73
SPIDR-224ENST00000524126 PDZD8Q8NEN9 1154 aa10.49□□□□□ -0.73
SPIDR-224ENST00000524126 FLAD1Q8NFF5 587 aa10.49□□□□□ -0.73
SPIDR-224ENST00000524126 TRPC4APQ8TEL6 797 aa10.49□□□□□ -0.73
SPIDR-224ENST00000524126 ZC3H12CQ9C0D7 883 aaKnown RBP10.49□□□□□ -0.73
SPIDR-224ENST00000524126 RABL2AQ9UBK7 228 aaPredicted RBP10.49□□□□□ -0.73
SPIDR-224ENST00000524126 FETUBQ9UGM5 382 aa10.49□□□□□ -0.73
SPIDR-224ENST00000524126 TCRBV9S1A1TA0A576 114 aa10.48□□□□□ -0.73
SPIDR-224ENST00000524126 TESPA1A2RU30 521 aaPredicted RBP10.48□□□□□ -0.73
SPIDR-224ENST00000524126 ZBTB39O15060 712 aa10.48□□□□□ -0.73
SPIDR-224ENST00000524126 PPP1R11O60927 126 aaPredicted RBP10.48□□□□□ -0.73
SPIDR-224ENST00000524126 MYO1DO94832 1006 aa10.48□□□□□ -0.73
SPIDR-224ENST00000524126 SEC24DO94855 1032 aaPredicted RBP10.48□□□□□ -0.73
SPIDR-224ENST00000524126 FAM13AO94988 1023 aa10.48□□□□□ -0.73
SPIDR-224ENST00000524126 ERBB2P04626 1255 aa10.48□□□□□ -0.73
SPIDR-224ENST00000524126 PTPN2P17706 415 aa10.48□□□□□ -0.73
SPIDR-224ENST00000524126 TCN1P20061 433 aaPredicted RBP10.48□□□□□ -0.73
SPIDR-224ENST00000524126 ETFBP38117 255 aa10.48□□□□□ -0.73
SPIDR-224ENST00000524126 NR4A2P43354 598 aa10.48□□□□□ -0.73
SPIDR-224ENST00000524126 BAG6P46379 1132 aa10.48□□□□□ -0.73
SPIDR-224ENST00000524126 PGS1Q32NB8 556 aa10.48□□□□□ -0.73
SPIDR-224ENST00000524126 MFSD7Q6UXD7 560 aa10.48□□□□□ -0.73
SPIDR-224ENST00000524126 CTAGE3PQ8IX95 158 aa10.48□□□□□ -0.73
SPIDR-224ENST00000524126 CLIP4Q8N3C7 705 aa10.48□□□□□ -0.73
SPIDR-224ENST00000524126 PPM1NQ8N819 430 aa10.48□□□□□ -0.73
SPIDR-224ENST00000524126 FAM47BQ8NA70 645 aa10.48□□□□□ -0.73
SPIDR-224ENST00000524126 FAM156AQ8NDB6 213 aa10.48□□□□□ -0.73
SPIDR-224ENST00000524126 PPP1R14CQ8TAE6 165 aa10.48□□□□□ -0.73
SPIDR-224ENST00000524126 SLC44A1Q8WWI5 657 aa10.48□□□□□ -0.73
SPIDR-224ENST00000524126 NACC2Q96BF6 587 aa10.48□□□□□ -0.73
SPIDR-224ENST00000524126 EFHD2Q96C19 240 aaPredicted RBP10.48□□□□□ -0.73
SPIDR-224ENST00000524126 CEP95Q96GE4 821 aa10.48□□□□□ -0.73
SPIDR-224ENST00000524126 CDRT15Q96T59 188 aa10.48□□□□□ -0.73
SPIDR-224ENST00000524126 SLC29A1Q99808 456 aa10.48□□□□□ -0.73
SPIDR-224ENST00000524126 SH3GL1Q99961 368 aa10.48□□□□□ -0.73
SPIDR-224ENST00000524126 MRPL46Q9H2W6 279 aaKnown RBP10.48□□□□□ -0.73
SPIDR-224ENST00000524126 PCDH12Q9NPG4 1184 aa10.48□□□□□ -0.73
SPIDR-224ENST00000524126 PNPLA3Q9NST1 481 aa10.48□□□□□ -0.73
SPIDR-224ENST00000524126 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.48□□□□□ -0.73
SPIDR-224ENST00000524126 STK39Q9UEW8 545 aa10.48□□□□□ -0.73
SPIDR-224ENST00000524126 MOSPD1Q9UJG1 213 aa10.48□□□□□ -0.73
SPIDR-224ENST00000524126 ARHGAP26Q9UNA1 814 aa10.48□□□□□ -0.73
SPIDR-224ENST00000524126 FARP1Q9Y4F1 1045 aaPredicted RBP10.48□□□□□ -0.73
SPIDR-224ENST00000524126 CPQQ9Y646 472 aa10.48□□□□□ -0.73
SPIDR-224ENST00000524126 CDK5RAP2Q96SN8 1893 aa10.48□□□□□ -0.73
SPIDR-224ENST00000524126 ARFGEF1Q9Y6D6 1849 aa10.48□□□□□ -0.73
SPIDR-224ENST00000524126 PRSS51A0A1B0GVH4 220 aa10.48□□□□□ -0.73
SPIDR-224ENST00000524126 CXorf49A8MYA2 514 aaPredicted RBP10.48□□□□□ -0.73
SPIDR-224ENST00000524126 KBTBD13C9JR72 458 aa10.48□□□□□ -0.73
SPIDR-224ENST00000524126 STX16-NPEPL1H3BU86 382 aa10.48□□□□□ -0.73
SPIDR-224ENST00000524126 ZBTB14O43829 449 aa10.48□□□□□ -0.73
SPIDR-224ENST00000524126 WEE2P0C1S8 567 aa10.48□□□□□ -0.73
SPIDR-224ENST00000524126 ELK3P41970 407 aa10.48□□□□□ -0.73
SPIDR-224ENST00000524126 IDH3AP50213 366 aa10.48□□□□□ -0.73
SPIDR-224ENST00000524126 NUDT2P50583 147 aa10.48□□□□□ -0.73
SPIDR-224ENST00000524126 NFX1Q12986 1120 aaKnown RBP10.48□□□□□ -0.73
SPIDR-224ENST00000524126 OXA1LQ15070 435 aa10.48□□□□□ -0.73
SPIDR-224ENST00000524126 SHROOM1Q2M3G4 852 aaPredicted RBP10.48□□□□□ -0.73
SPIDR-224ENST00000524126 LSM12Q3MHD2 195 aaKnown RBP10.48□□□□□ -0.73
SPIDR-224ENST00000524126 PPM1LQ5SGD2 360 aa10.48□□□□□ -0.73
SPIDR-224ENST00000524126 TATDN1Q6P1N9 297 aa10.48□□□□□ -0.73
SPIDR-224ENST00000524126 C16orf46Q6P387 395 aa10.48□□□□□ -0.73
SPIDR-224ENST00000524126 RFPL4BQ6ZWI9 263 aa10.48□□□□□ -0.73
SPIDR-224ENST00000524126 C11orf74Q86VG3 221 aa10.48□□□□□ -0.73
SPIDR-224ENST00000524126 ZNF786Q8N393 782 aa10.48□□□□□ -0.73
SPIDR-224ENST00000524126 CMTM5Q96DZ9 223 aa10.48□□□□□ -0.73
SPIDR-224ENST00000524126 FAR2Q96K12 515 aa10.48□□□□□ -0.73
SPIDR-224ENST00000524126 ALPK1Q96QP1 1244 aa10.48□□□□□ -0.73
SPIDR-224ENST00000524126 CCDC68Q9H2F9 335 aa10.48□□□□□ -0.73
SPIDR-224ENST00000524126 CLK4Q9HAZ1 481 aaKnown RBP10.48□□□□□ -0.73
SPIDR-224ENST00000524126 SORCS3Q9UPU3 1222 aa10.48□□□□□ -0.73
SPIDR-224ENST00000524126 GPSM3Q9Y4H4 160 aa10.48□□□□□ -0.73
SPIDR-224ENST00000524126 USP17L15C9J2P7 530 aa10.47□□□□□ -0.73
SPIDR-224ENST00000524126 USP17L13C9JLJ4 530 aa10.47□□□□□ -0.73
SPIDR-224ENST00000524126 USP17L11C9JVI0 530 aa10.47□□□□□ -0.73
SPIDR-224ENST00000524126 USP17L18D6R9N7 530 aa10.47□□□□□ -0.73
SPIDR-224ENST00000524126 USP17L22D6RA61 530 aa10.47□□□□□ -0.73
SPIDR-224ENST00000524126 USP17L17D6RBQ6 530 aa10.47□□□□□ -0.73
SPIDR-224ENST00000524126 USP17L19D6RCP7 530 aa10.47□□□□□ -0.73
SPIDR-224ENST00000524126 USP17L20D6RJB6 530 aa10.47□□□□□ -0.73
SPIDR-224ENST00000524126 DYNC1LI2O43237 492 aaPredicted RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms