RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 KCNN2Q9H2S1 579 aa7.78□□□□□ -1.16
HDAC3-216ENST00000523088 NOD2Q9HC29 1040 aa7.78□□□□□ -1.16
HDAC3-216ENST00000523088 GPHNQ9NQX3 736 aaPredicted RBP7.78□□□□□ -1.16
HDAC3-216ENST00000523088 DIABLOQ9NR28 239 aa7.78□□□□□ -1.16
HDAC3-216ENST00000523088 TMEM39AQ9NV64 488 aa7.78□□□□□ -1.16
HDAC3-216ENST00000523088 POLR3EQ9NVU0 708 aa7.78□□□□□ -1.16
HDAC3-216ENST00000523088 ARHGEF38Q9NXL2 777 aa7.78□□□□□ -1.16
HDAC3-216ENST00000523088 GDAP2Q9NXN4 497 aa7.78□□□□□ -1.16
HDAC3-216ENST00000523088 STK17AQ9UEE5 414 aa7.78□□□□□ -1.16
HDAC3-216ENST00000523088 SALL4Q9UJQ4 1053 aa7.78□□□□□ -1.16
HDAC3-216ENST00000523088 C19orf53Q9UNZ5 99 aaPredicted RBP7.78□□□□□ -1.16
HDAC3-216ENST00000523088 ERVK-19Q9WJR5 959 aa7.78□□□□□ -1.16
HDAC3-216ENST00000523088 SPEF1Q9Y4P9 236 aa7.78□□□□□ -1.16
HDAC3-216ENST00000523088 LRRC42Q9Y546 428 aa7.78□□□□□ -1.16
HDAC3-216ENST00000523088 TNKSO95271 1327 aa7.78□□□□□ -1.16
HDAC3-216ENST00000523088 NEDD4P46934 1319 aa7.78□□□□□ -1.16
HDAC3-216ENST00000523088 FRMPD4Q14CM0 1322 aa7.78□□□□□ -1.16
HDAC3-216ENST00000523088 PHLPP2Q6ZVD8 1323 aa7.78□□□□□ -1.16
HDAC3-216ENST00000523088 SCN10AQ9Y5Y9 1956 aa7.77□□□□□ -1.17
HDAC3-216ENST00000523088 ABHD14A-ACY1A0A1B0GW23 586 aa7.77□□□□□ -1.17
HDAC3-216ENST00000523088 CTAGE15A4D2H0 777 aa7.77□□□□□ -1.17
HDAC3-216ENST00000523088 CFAP73A6NFT4 308 aa7.77□□□□□ -1.17
HDAC3-216ENST00000523088 ANKRD65E5RJM6 399 aa7.77□□□□□ -1.17
HDAC3-216ENST00000523088 ARVCFO00192 962 aa7.77□□□□□ -1.17
HDAC3-216ENST00000523088 MEN1O00255 615 aa7.77□□□□□ -1.17
HDAC3-216ENST00000523088 SLC9A3R1O14745 358 aaPredicted RBP7.77□□□□□ -1.17
HDAC3-216ENST00000523088 ALOX15BO15296 676 aa7.77□□□□□ -1.17
HDAC3-216ENST00000523088 PQBP1O60828 265 aaKnown RBP7.77□□□□□ -1.17
HDAC3-216ENST00000523088 NOL3O60936 208 aaKnown RBP7.77□□□□□ -1.17
HDAC3-216ENST00000523088 TMEM127O75204 238 aa7.77□□□□□ -1.17
HDAC3-216ENST00000523088 GMNNO75496 209 aa7.77□□□□□ -1.17
HDAC3-216ENST00000523088 ASMTLO95671 621 aa7.77□□□□□ -1.17
HDAC3-216ENST00000523088 CLPTM1O96005 669 aa7.77□□□□□ -1.17
HDAC3-216ENST00000523088 PLATP00750 562 aa7.77□□□□□ -1.17
HDAC3-216ENST00000523088 URODP06132 367 aa7.77□□□□□ -1.17
HDAC3-216ENST00000523088 WEE2P0C1S8 567 aa7.77□□□□□ -1.17
HDAC3-216ENST00000523088 CTAGE8P0CG41 777 aa7.77□□□□□ -1.17
HDAC3-216ENST00000523088 MYL4P12829 197 aa7.77□□□□□ -1.17
HDAC3-216ENST00000523088 TIMP2P16035 220 aa7.77□□□□□ -1.17
HDAC3-216ENST00000523088 HOXB8P17481 243 aaPredicted RBP7.77□□□□□ -1.17
HDAC3-216ENST00000523088 TAL1P17542 331 aaPredicted RBP7.77□□□□□ -1.17
HDAC3-216ENST00000523088 MAPK3P27361 379 aaPredicted RBP7.77□□□□□ -1.17
HDAC3-216ENST00000523088 CDC25BP30305 580 aa7.77□□□□□ -1.17
HDAC3-216ENST00000523088 POLR2BP30876 1174 aaKnown RBP7.77□□□□□ -1.17
HDAC3-216ENST00000523088 GDI1P31150 447 aa7.77□□□□□ -1.17
HDAC3-216ENST00000523088 PHBP35232 272 aa7.77□□□□□ -1.17
HDAC3-216ENST00000523088 PCP4P48539 62 aa7.77□□□□□ -1.17
HDAC3-216ENST00000523088 IRAK1P51617 712 aa7.77□□□□□ -1.17
HDAC3-216ENST00000523088 SMAD3P84022 425 aaKnown RBP7.77□□□□□ -1.17
HDAC3-216ENST00000523088 FOXK2Q01167 660 aa7.77□□□□□ -1.17
HDAC3-216ENST00000523088 CNTN2Q02246 1040 aa7.77□□□□□ -1.17
HDAC3-216ENST00000523088 FPGSQ05932 587 aa7.77□□□□□ -1.17
HDAC3-216ENST00000523088 PPIGQ13427 754 aaKnown RBP eCLIP7.77□□□□□ -1.171e-6■■□□□ 12.7
HDAC3-216ENST00000523088 ITGA9Q13797 1035 aa7.77□□□□□ -1.17
HDAC3-216ENST00000523088 TLR1Q15399 786 aa7.77□□□□□ -1.17
HDAC3-216ENST00000523088 FSCN1Q16658 493 aaKnown RBP7.77□□□□□ -1.17
HDAC3-216ENST00000523088 HADHQ16836 314 aaKnown RBP7.77□□□□□ -1.17
HDAC3-216ENST00000523088 LONRF2Q1L5Z9 754 aa7.77□□□□□ -1.17
HDAC3-216ENST00000523088 AAK1Q2M2I8 961 aa7.77□□□□□ -1.17
HDAC3-216ENST00000523088 ALG11Q2TAA5 492 aa7.77□□□□□ -1.17
HDAC3-216ENST00000523088 DUSP28Q4G0W2 176 aa7.77□□□□□ -1.17
HDAC3-216ENST00000523088 ZNF697Q5TEC3 545 aa7.77□□□□□ -1.17
HDAC3-216ENST00000523088 TMEM214Q6NUQ4 689 aaKnown RBP7.77□□□□□ -1.17
HDAC3-216ENST00000523088 PSRC1Q6PGN9 363 aaPredicted RBP7.77□□□□□ -1.17
HDAC3-216ENST00000523088 PAPD4Q6PIY7 484 aaKnown RBP7.77□□□□□ -1.17
HDAC3-216ENST00000523088 SEZ6L2Q6UXD5 910 aa7.77□□□□□ -1.17
HDAC3-216ENST00000523088 CYP4V2Q6ZWL3 525 aaPredicted RBP7.77□□□□□ -1.17
HDAC3-216ENST00000523088 DHX32Q7L7V1 743 aaKnown RBP7.77□□□□□ -1.17
HDAC3-216ENST00000523088 CYP2U1Q7Z449 544 aa7.77□□□□□ -1.17
HDAC3-216ENST00000523088 ADAMTSL2Q86TH1 951 aa7.77□□□□□ -1.17
HDAC3-216ENST00000523088 CTAGE6Q86UF2 777 aa7.77□□□□□ -1.17
HDAC3-216ENST00000523088 PALB2Q86YC2 1186 aa7.77□□□□□ -1.17
HDAC3-216ENST00000523088 RHPN2Q8IUC4 686 aa7.77□□□□□ -1.17
HDAC3-216ENST00000523088 CTAGE4Q8IX94 777 aa7.77□□□□□ -1.17
HDAC3-216ENST00000523088 MAML2Q8IZL2 1156 aaPredicted RBP7.77□□□□□ -1.17
HDAC3-216ENST00000523088 ZNF654Q8IZM8 581 aa7.77□□□□□ -1.17
HDAC3-216ENST00000523088 CARFQ8N187 725 aa7.77□□□□□ -1.17
HDAC3-216ENST00000523088 TMEM199Q8N511 208 aa7.77□□□□□ -1.17
HDAC3-216ENST00000523088 PIK3C3Q8NEB9 887 aa7.77□□□□□ -1.17
HDAC3-216ENST00000523088 SLC2A14Q8TDB8 520 aa7.77□□□□□ -1.17
HDAC3-216ENST00000523088 SCFD2Q8WU76 684 aa7.77□□□□□ -1.17
HDAC3-216ENST00000523088 SLC7A3Q8WY07 619 aa7.77□□□□□ -1.17
HDAC3-216ENST00000523088 CHMP6Q96FZ7 201 aa7.77□□□□□ -1.17
HDAC3-216ENST00000523088 WACQ9BTA9 647 aa7.77□□□□□ -1.17
HDAC3-216ENST00000523088 NTMT1Q9BV86 223 aa7.77□□□□□ -1.17
HDAC3-216ENST00000523088 TRIM62Q9BVG3 475 aa7.77□□□□□ -1.17
HDAC3-216ENST00000523088 BTBD2Q9BX70 525 aa7.77□□□□□ -1.17
HDAC3-216ENST00000523088 PINK1Q9BXM7 581 aa7.77□□□□□ -1.17
HDAC3-216ENST00000523088 KATNBL1Q9H079 304 aa7.77□□□□□ -1.17
HDAC3-216ENST00000523088 OCEL1Q9H607 264 aa7.77□□□□□ -1.17
HDAC3-216ENST00000523088 SP140LQ9H930 580 aa7.77□□□□□ -1.17
HDAC3-216ENST00000523088 TMEM260Q9NX78 707 aa7.77□□□□□ -1.17
HDAC3-216ENST00000523088 KLHL3Q9UH77 587 aa7.77□□□□□ -1.17
HDAC3-216ENST00000523088 DACH1Q9UI36 760 aa7.77□□□□□ -1.17
HDAC3-216ENST00000523088 MOSPD1Q9UJG1 213 aa7.77□□□□□ -1.17
HDAC3-216ENST00000523088 DCTN4Q9UJW0 460 aa7.77□□□□□ -1.17
HDAC3-216ENST00000523088 PSME2Q9UL46 239 aa7.77□□□□□ -1.17
HDAC3-216ENST00000523088 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.77□□□□□ -1.17
HDAC3-216ENST00000523088 TRIM33Q9UPN9 1127 aa7.77□□□□□ -1.17
HDAC3-216ENST00000523088 GAB2Q9UQC2 676 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms