RNA–Protein interactions for RNA: ENST00000509277.5

LIMCH1-209, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2 BASIC

Gene LIMCH1, Length 3,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-209ENST00000509277 ARHGEF37A1IGU5 675 aa8.99□□□□□ -0.97
LIMCH1-209ENST00000509277 MDM4O15151 490 aa8.99□□□□□ -0.97
LIMCH1-209ENST00000509277 NCAM1P13591 858 aa8.99□□□□□ -0.97
LIMCH1-209ENST00000509277 NPR3P17342 541 aa8.99□□□□□ -0.97
LIMCH1-209ENST00000509277 LAG3P18627 525 aa8.99□□□□□ -0.97
LIMCH1-209ENST00000509277 GLUD2P49448 558 aa8.99□□□□□ -0.97
LIMCH1-209ENST00000509277 ASTE1Q2TB18 679 aaPredicted RBP8.99□□□□□ -0.97
LIMCH1-209ENST00000509277 SH3PXD2AQ5TCZ1 1133 aa8.99□□□□□ -0.97
LIMCH1-209ENST00000509277 YTHDF3Q7Z739 585 aaKnown RBP8.99□□□□□ -0.97
LIMCH1-209ENST00000509277 TMEM86AQ8N2M4 240 aa8.99□□□□□ -0.97
LIMCH1-209ENST00000509277 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.99□□□□□ -0.97
LIMCH1-209ENST00000509277 NETO2Q8NC67 525 aa8.99□□□□□ -0.97
LIMCH1-209ENST00000509277 POF1BQ8WVV4 589 aa8.99□□□□□ -0.97
LIMCH1-209ENST00000509277 RFFLQ8WZ73 363 aa8.99□□□□□ -0.97
LIMCH1-209ENST00000509277 KCNN1Q92952 543 aa8.99□□□□□ -0.97
LIMCH1-209ENST00000509277 TRAIPQ9BWF2 469 aa8.99□□□□□ -0.97
LIMCH1-209ENST00000509277 CWH43Q9H720 699 aa8.99□□□□□ -0.97
LIMCH1-209ENST00000509277 AMFRQ9UKV5 643 aa8.99□□□□□ -0.97
LIMCH1-209ENST00000509277 CDH9Q9ULB4 789 aa8.99□□□□□ -0.97
LIMCH1-209ENST00000509277 CORO1CQ9ULV4 474 aaPredicted RBP8.99□□□□□ -0.97
LIMCH1-209ENST00000509277 PCDHB8Q9UN66 801 aa8.99□□□□□ -0.97
LIMCH1-209ENST00000509277 PIAS1O75925 651 aa8.99□□□□□ -0.97
LIMCH1-209ENST00000509277 GJA1P17302 382 aa8.99□□□□□ -0.97
LIMCH1-209ENST00000509277 COMTP21964 271 aa8.99□□□□□ -0.97
LIMCH1-209ENST00000509277 WARSP23381 471 aaKnown RBP8.99□□□□□ -0.97
LIMCH1-209ENST00000509277 ATXN1P54253 815 aaKnown RBP8.99□□□□□ -0.97
LIMCH1-209ENST00000509277 ATP13A4Q4VNC1 1196 aa8.99□□□□□ -0.97
LIMCH1-209ENST00000509277 RAB6CQ53S08 254 aa8.99□□□□□ -0.97
LIMCH1-209ENST00000509277 C4orf50Q6ZRC1 276 aa8.99□□□□□ -0.97
LIMCH1-209ENST00000509277 UNC93AQ86WB7 457 aa8.99□□□□□ -0.97
LIMCH1-209ENST00000509277 GDPD5Q8WTR4 605 aa8.99□□□□□ -0.97
LIMCH1-209ENST00000509277 RBM41Q96IZ5 413 aaKnown RBP8.99□□□□□ -0.97
LIMCH1-209ENST00000509277 SIK2Q9H0K1 926 aa8.99□□□□□ -0.97
LIMCH1-209ENST00000509277 RAB6CQ9H0N0 254 aa8.99□□□□□ -0.97
LIMCH1-209ENST00000509277 TMEM30AQ9NV96 361 aa8.99□□□□□ -0.97
LIMCH1-209ENST00000509277 CTNNAL1Q9UBT7 734 aa8.99□□□□□ -0.97
LIMCH1-209ENST00000509277 DSEQ9UL01 958 aa8.99□□□□□ -0.97
LIMCH1-209ENST00000509277 LZTS1Q9Y250 596 aa8.99□□□□□ -0.97
LIMCH1-209ENST00000509277 PCDHB5Q9Y5E4 795 aa8.99□□□□□ -0.97
LIMCH1-209ENST00000509277 IRF1P10914 325 aa8.98□□□□□ -0.97
LIMCH1-209ENST00000509277 SERPINB3P29508 390 aa8.98□□□□□ -0.97
LIMCH1-209ENST00000509277 GPD2P43304 727 aa8.98□□□□□ -0.97
LIMCH1-209ENST00000509277 MARCKSL1P49006 195 aa8.98□□□□□ -0.97
LIMCH1-209ENST00000509277 COPS2P61201 443 aa8.98□□□□□ -0.97
LIMCH1-209ENST00000509277 NCALDP61601 193 aa8.98□□□□□ -0.97
LIMCH1-209ENST00000509277 CDK17Q00537 523 aa8.98□□□□□ -0.97
LIMCH1-209ENST00000509277 PLD1Q13393 1074 aa8.98□□□□□ -0.97
LIMCH1-209ENST00000509277 BLMHQ13867 455 aa8.98□□□□□ -0.97
LIMCH1-209ENST00000509277 SKIV2LQ15477 1246 aaKnown RBP8.98□□□□□ -0.97
LIMCH1-209ENST00000509277 UAP1Q16222 522 aaPredicted RBP8.98□□□□□ -0.97
LIMCH1-209ENST00000509277 IFI16Q16666 785 aaKnown RBP8.98□□□□□ -0.97
LIMCH1-209ENST00000509277 CLEC20AQ6ZU45 233 aa8.98□□□□□ -0.97
LIMCH1-209ENST00000509277 CCDC105Q8IYK2 499 aa8.98□□□□□ -0.97
LIMCH1-209ENST00000509277 ANKRD52Q8NB46 1076 aa8.98□□□□□ -0.97
LIMCH1-209ENST00000509277 CFAP61Q8NHU2 1237 aa8.98□□□□□ -0.97
LIMCH1-209ENST00000509277 SMARCD1Q96GM5 515 aa8.98□□□□□ -0.97
LIMCH1-209ENST00000509277 CALN1Q9BXU9 219 aa8.98□□□□□ -0.97
LIMCH1-209ENST00000509277 SMPD4Q9NXE4 827 aa8.98□□□□□ -0.97
LIMCH1-209ENST00000509277 RASGRF2O14827 1237 aa8.98□□□□□ -0.97
LIMCH1-209ENST00000509277 EFCAB14O75071 495 aa8.98□□□□□ -0.97
LIMCH1-209ENST00000509277 CALB1P05937 261 aa8.98□□□□□ -0.97
LIMCH1-209ENST00000509277 PFKMP08237 780 aa8.98□□□□□ -0.97
LIMCH1-209ENST00000509277 GSTT1P30711 240 aa8.98□□□□□ -0.97
LIMCH1-209ENST00000509277 IRS1P35568 1242 aa8.98□□□□□ -0.97
LIMCH1-209ENST00000509277 KCNJ1P48048 391 aa8.98□□□□□ -0.97
LIMCH1-209ENST00000509277 ROR1Q01973 937 aa8.98□□□□□ -0.97
LIMCH1-209ENST00000509277 INCA1Q0VD86 236 aa8.98□□□□□ -0.97
LIMCH1-209ENST00000509277 ELAVL2Q12926 359 aaKnown RBP8.98□□□□□ -0.97
LIMCH1-209ENST00000509277 DNAJC3Q13217 504 aa8.98□□□□□ -0.97
LIMCH1-209ENST00000509277 LCLAT1Q6UWP7 414 aa8.98□□□□□ -0.97
LIMCH1-209ENST00000509277 CD300LGQ6UXG3 332 aa8.98□□□□□ -0.97
LIMCH1-209ENST00000509277 TRIM72Q6ZMU5 477 aa8.98□□□□□ -0.97
LIMCH1-209ENST00000509277 HFE2Q6ZVN8 426 aa8.98□□□□□ -0.97
LIMCH1-209ENST00000509277 ANKS3Q6ZW76 656 aa8.98□□□□□ -0.97
LIMCH1-209ENST00000509277 FAM131BQ86XD5 332 aa8.98□□□□□ -0.97
LIMCH1-209ENST00000509277 SLC7A14Q8TBB6 771 aa8.98□□□□□ -0.97
LIMCH1-209ENST00000509277 NDNQ99608 321 aa8.98□□□□□ -0.97
LIMCH1-209ENST00000509277 SMOQ99835 787 aa8.98□□□□□ -0.97
LIMCH1-209ENST00000509277 RTP3Q9BQQ7 232 aa8.98□□□□□ -0.97
LIMCH1-209ENST00000509277 PARVAQ9NVD7 372 aa8.98□□□□□ -0.97
LIMCH1-209ENST00000509277 NKIRAS1Q9NYS0 192 aa8.98□□□□□ -0.97
LIMCH1-209ENST00000509277 TDRKHQ9Y2W6 561 aaKnown RBP8.98□□□□□ -0.97
LIMCH1-209ENST00000509277 ALG6Q9Y672 507 aa8.98□□□□□ -0.97
LIMCH1-209ENST00000509277 GRID2IPA4D2P6 1211 aa8.97□□□□□ -0.97
LIMCH1-209ENST00000509277 TTC36A6NLP5 189 aa8.97□□□□□ -0.97
LIMCH1-209ENST00000509277 HIDE1A8MVS5 230 aa8.97□□□□□ -0.97
LIMCH1-209ENST00000509277 AHCYL1O43865 530 aa8.97□□□□□ -0.97
LIMCH1-209ENST00000509277 TMEM253P0C7T8 217 aa8.97□□□□□ -0.97
LIMCH1-209ENST00000509277 UNGP13051 313 aaPredicted RBP8.97□□□□□ -0.97
LIMCH1-209ENST00000509277 ALDH3A1P30838 453 aa8.97□□□□□ -0.97
LIMCH1-209ENST00000509277 ZNF132P52740 706 aa8.97□□□□□ -0.97
LIMCH1-209ENST00000509277 ERVFC1P60507 584 aa8.97□□□□□ -0.97
LIMCH1-209ENST00000509277 RCN1Q15293 331 aa8.97□□□□□ -0.97
LIMCH1-209ENST00000509277 ANO7Q6IWH7 933 aa8.97□□□□□ -0.97
LIMCH1-209ENST00000509277 C6orf89Q6UWU4 347 aa8.97□□□□□ -0.97
LIMCH1-209ENST00000509277 SPATA24Q86W54 205 aa8.97□□□□□ -0.97
LIMCH1-209ENST00000509277 ZNF677Q86XU0 584 aa8.97□□□□□ -0.97
LIMCH1-209ENST00000509277 TTC39CQ8N584 583 aa8.97□□□□□ -0.97
LIMCH1-209ENST00000509277 PDCD7Q8N8D1 485 aaKnown RBP8.97□□□□□ -0.97
LIMCH1-209ENST00000509277 PIP4K2CQ8TBX8 421 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms