RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 TBCBQ99426 244 aa14.08□□□□□ -0.16
COL1A1-208ENST00000494334 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.08□□□□□ -0.16
COL1A1-208ENST00000494334 SELENOOQ9BVL4 669 aa14.08□□□□□ -0.16
COL1A1-208ENST00000494334 BBS2Q9BXC9 721 aa14.08□□□□□ -0.16
COL1A1-208ENST00000494334 LMAN1LQ9HAT1 526 aa14.08□□□□□ -0.16
COL1A1-208ENST00000494334 ABHD10Q9NUJ1 306 aa14.08□□□□□ -0.16
COL1A1-208ENST00000494334 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.08□□□□□ -0.16
COL1A1-208ENST00000494334 COX16Q9P0S2 106 aa14.08□□□□□ -0.16
COL1A1-208ENST00000494334 A0A087X0T9 212 aa14.07□□□□□ -0.16
COL1A1-208ENST00000494334 C2CD4BA6NLJ0 364 aa14.07□□□□□ -0.16
COL1A1-208ENST00000494334 SIGLEC16A6NMB1 481 aa14.07□□□□□ -0.16
COL1A1-208ENST00000494334 AKR1B15C9JRZ8 316 aaPredicted RBP14.07□□□□□ -0.16
COL1A1-208ENST00000494334 GFRA2O00451 464 aa14.07□□□□□ -0.16
COL1A1-208ENST00000494334 MOCS2O96007 188 aaPredicted RBP14.07□□□□□ -0.16
COL1A1-208ENST00000494334 APOEP02649 317 aa14.07□□□□□ -0.16
COL1A1-208ENST00000494334 FAM228BP0C875 321 aa14.07□□□□□ -0.16
COL1A1-208ENST00000494334 TYRP14679 529 aa14.07□□□□□ -0.16
COL1A1-208ENST00000494334 CCR1P32246 355 aa14.07□□□□□ -0.16
COL1A1-208ENST00000494334 EIF2DP41214 584 aaKnown RBP14.07□□□□□ -0.16
COL1A1-208ENST00000494334 SLC11A2P49281 568 aa14.07□□□□□ -0.16
COL1A1-208ENST00000494334 GRSF1Q12849 480 aaKnown RBP eCLIP14.07□□□□□ -0.16
COL1A1-208ENST00000494334 NME3Q13232 169 aa14.07□□□□□ -0.16
COL1A1-208ENST00000494334 CCINQ13939 588 aa14.07□□□□□ -0.16
COL1A1-208ENST00000494334 FAM133BQ5BKY9 247 aaKnown RBP14.07□□□□□ -0.16
COL1A1-208ENST00000494334 FYB2Q5VWT5 728 aa14.07□□□□□ -0.16
COL1A1-208ENST00000494334 NADSYN1Q6IA69 706 aa14.07□□□□□ -0.16
COL1A1-208ENST00000494334 BNIPLQ7Z465 357 aa14.07□□□□□ -0.16
COL1A1-208ENST00000494334 VPS36Q86VN1 386 aa14.07□□□□□ -0.16
COL1A1-208ENST00000494334 ETFBKMTQ8IXQ9 262 aa14.07□□□□□ -0.16
COL1A1-208ENST00000494334 RXFP2Q8WXD0 754 aa14.07□□□□□ -0.16
COL1A1-208ENST00000494334 BHMTQ93088 406 aa14.07□□□□□ -0.16
COL1A1-208ENST00000494334 RNF34Q969K3 372 aa14.07□□□□□ -0.16
COL1A1-208ENST00000494334 EXOC4Q96A65 974 aa14.07□□□□□ -0.16
COL1A1-208ENST00000494334 ISCUQ9H1K1 167 aa14.07□□□□□ -0.16
COL1A1-208ENST00000494334 RBM12Q9NTZ6 932 aaKnown RBP14.07□□□□□ -0.16
COL1A1-208ENST00000494334 PIGVQ9NUD9 493 aa14.07□□□□□ -0.16
COL1A1-208ENST00000494334 PLK2Q9NYY3 685 aa14.07□□□□□ -0.16
COL1A1-208ENST00000494334 XPO7Q9UIA9 1087 aaKnown RBP14.07□□□□□ -0.16
COL1A1-208ENST00000494334 KCNU1A8MYU2 1149 aa14.06□□□□□ -0.16
COL1A1-208ENST00000494334 TSPAN3O60637 253 aa14.06□□□□□ -0.16
COL1A1-208ENST00000494334 TULP3O75386 442 aa14.06□□□□□ -0.16
COL1A1-208ENST00000494334 F9P00740 461 aa14.06□□□□□ -0.16
COL1A1-208ENST00000494334 EGFP01133 1207 aa14.06□□□□□ -0.16
COL1A1-208ENST00000494334 PENKP01210 267 aaPredicted RBP14.06□□□□□ -0.16
COL1A1-208ENST00000494334 SLC2A3P11169 496 aa14.06□□□□□ -0.16
COL1A1-208ENST00000494334 PDGFRAP16234 1089 aa14.06□□□□□ -0.16
COL1A1-208ENST00000494334 DRD1P21728 446 aa14.06□□□□□ -0.16
COL1A1-208ENST00000494334 SLC6A4P31645 630 aa14.06□□□□□ -0.16
COL1A1-208ENST00000494334 RFC1P35251 1148 aaPredicted RBP14.06□□□□□ -0.16
COL1A1-208ENST00000494334 EIF4A3P38919 411 aaKnown RBP14.06□□□□□ -0.16
COL1A1-208ENST00000494334 RPS9P46781 194 aaKnown RBP14.06□□□□□ -0.16
COL1A1-208ENST00000494334 ATXN1P54253 815 aaKnown RBP14.06□□□□□ -0.16
COL1A1-208ENST00000494334 DEUP1Q05D60 604 aa14.06□□□□□ -0.16
COL1A1-208ENST00000494334 MESP2Q0VG99 397 aa14.06□□□□□ -0.16
COL1A1-208ENST00000494334 PPP2R5DQ14738 602 aa14.06□□□□□ -0.16
COL1A1-208ENST00000494334 TSR1Q2NL82 804 aaKnown RBP14.06□□□□□ -0.16
COL1A1-208ENST00000494334 CCDC14Q49A88 953 aa14.06□□□□□ -0.16
COL1A1-208ENST00000494334 DGKKQ5KSL6 1271 aa14.06□□□□□ -0.16
COL1A1-208ENST00000494334 PPP1R15BQ5SWA1 713 aa14.06□□□□□ -0.16
COL1A1-208ENST00000494334 DNAJC24Q6P3W2 148 aa14.06□□□□□ -0.16
COL1A1-208ENST00000494334 RFWD3Q6PCD5 774 aa14.06□□□□□ -0.16
COL1A1-208ENST00000494334 CNGA4Q8IV77 575 aa14.06□□□□□ -0.16
COL1A1-208ENST00000494334 PHTF2Q8N3S3 785 aa14.06□□□□□ -0.16
COL1A1-208ENST00000494334 ATP6V0D2Q8N8Y2 350 aa14.06□□□□□ -0.16
COL1A1-208ENST00000494334 DDI1Q8WTU0 396 aa14.06□□□□□ -0.16
COL1A1-208ENST00000494334 EZH1Q92800 747 aaPredicted RBP14.06□□□□□ -0.16
COL1A1-208ENST00000494334 TMA16Q96EY4 203 aaKnown RBP14.06□□□□□ -0.16
COL1A1-208ENST00000494334 BTN2A3PQ96KV6 586 aa14.06□□□□□ -0.16
COL1A1-208ENST00000494334 XPO6Q96QU8 1125 aaKnown RBP14.06□□□□□ -0.16
COL1A1-208ENST00000494334 PNKPQ96T60 521 aa14.06□□□□□ -0.16
COL1A1-208ENST00000494334 CHP1Q99653 195 aa14.06□□□□□ -0.16
COL1A1-208ENST00000494334 ZNHIT6Q9NWK9 470 aaKnown RBP14.06□□□□□ -0.16
COL1A1-208ENST00000494334 SLC12A6Q9UHW9 1150 aa14.06□□□□□ -0.16
COL1A1-208ENST00000494334 FBXO10Q9UK96 956 aa14.06□□□□□ -0.16
COL1A1-208ENST00000494334 ZDBF2Q9HCK1 2354 aa14.05□□□□□ -0.16
COL1A1-208ENST00000494334 A0A0A0MRY4 1105 aa14.05□□□□□ -0.16
COL1A1-208ENST00000494334 SSU72P8A0A1W2PR75 194 aa14.05□□□□□ -0.16
COL1A1-208ENST00000494334 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.05□□□□□ -0.16
COL1A1-208ENST00000494334 TRIM24O15164 1050 aa14.05□□□□□ -0.16
COL1A1-208ENST00000494334 ATMINO43313 823 aaPredicted RBP14.05□□□□□ -0.16
COL1A1-208ENST00000494334 CACNG3O60359 315 aa14.05□□□□□ -0.16
COL1A1-208ENST00000494334 ENDOD1O94919 500 aa14.05□□□□□ -0.16
COL1A1-208ENST00000494334 CYBBP04839 570 aa14.05□□□□□ -0.16
COL1A1-208ENST00000494334 ABCB4P21439 1286 aa14.05□□□□□ -0.16
COL1A1-208ENST00000494334 SDC4P31431 198 aa14.05□□□□□ -0.16
COL1A1-208ENST00000494334 MAGEA9P43362 315 aa14.05□□□□□ -0.16
COL1A1-208ENST00000494334 PTPN9P43378 593 aa14.05□□□□□ -0.16
COL1A1-208ENST00000494334 CXCR3P49682 368 aa14.05□□□□□ -0.16
COL1A1-208ENST00000494334 RPL7AP62424 266 aaKnown RBP14.05□□□□□ -0.16
COL1A1-208ENST00000494334 ATP11AP98196 1134 aa14.05□□□□□ -0.16
COL1A1-208ENST00000494334 MAPK8IP2Q13387 824 aaPredicted RBP14.05□□□□□ -0.16
COL1A1-208ENST00000494334 MAMLD1Q13495 774 aa14.05□□□□□ -0.16
COL1A1-208ENST00000494334 LRRC32Q14392 662 aa14.05□□□□□ -0.16
COL1A1-208ENST00000494334 C15orf59Q2T9L4 293 aaPredicted RBP14.05□□□□□ -0.16
COL1A1-208ENST00000494334 ASTE1Q2TB18 679 aaPredicted RBP14.05□□□□□ -0.16
COL1A1-208ENST00000494334 MPPE1Q53F39 396 aa14.05□□□□□ -0.16
COL1A1-208ENST00000494334 SH3PXD2AQ5TCZ1 1133 aa14.05□□□□□ -0.16
COL1A1-208ENST00000494334 PIK3R6Q5UE93 754 aa14.05□□□□□ -0.16
COL1A1-208ENST00000494334 PLEKHA7Q6IQ23 1121 aa14.05□□□□□ -0.16
COL1A1-208ENST00000494334 ALKBH5Q6P6C2 394 aaKnown RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms