RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 EOGTQ5NDL2 527 aa8.62□□□□□ -1.03
HDAC6-221ENST00000477561 FKBP15Q5T1M5 1219 aa8.62□□□□□ -1.03
HDAC6-221ENST00000477561 TAF3Q5VWG9 929 aa8.62□□□□□ -1.03
HDAC6-221ENST00000477561 EGFLAMQ63HQ2 1017 aa8.62□□□□□ -1.03
HDAC6-221ENST00000477561 MSANTD2Q6P1R3 559 aa8.62□□□□□ -1.03
HDAC6-221ENST00000477561 NUDT18Q6ZVK8 323 aa8.62□□□□□ -1.03
HDAC6-221ENST00000477561 TMC6Q7Z403 805 aa8.62□□□□□ -1.03
HDAC6-221ENST00000477561 TMEM110Q86TL2 294 aa8.62□□□□□ -1.03
HDAC6-221ENST00000477561 KBTBD6Q86V97 674 aa8.62□□□□□ -1.03
HDAC6-221ENST00000477561 VSTM4Q8IW00 320 aa8.62□□□□□ -1.03
HDAC6-221ENST00000477561 FAM71AQ8IYT1 594 aa8.62□□□□□ -1.03
HDAC6-221ENST00000477561 PGBD3Q8N328 593 aa8.62□□□□□ -1.03
HDAC6-221ENST00000477561 CPXM2Q8N436 756 aa8.62□□□□□ -1.03
HDAC6-221ENST00000477561 FAM160A2Q8N612 972 aaPredicted RBP8.62□□□□□ -1.03
HDAC6-221ENST00000477561 SPC24Q8NBT2 197 aa8.62□□□□□ -1.03
HDAC6-221ENST00000477561 C1orf131Q8NDD1 294 aaKnown RBP8.62□□□□□ -1.03
HDAC6-221ENST00000477561 DQX1Q8TE96 717 aaKnown RBP8.62□□□□□ -1.03
HDAC6-221ENST00000477561 STK32AQ8WU08 396 aa8.62□□□□□ -1.03
HDAC6-221ENST00000477561 GAB3Q8WWW8 586 aa8.62□□□□□ -1.03
HDAC6-221ENST00000477561 PIWIL1Q96J94 861 aaKnown RBP8.62□□□□□ -1.03
HDAC6-221ENST00000477561 PPP1R13BQ96KQ4 1090 aa8.62□□□□□ -1.03
HDAC6-221ENST00000477561 PCMTD1Q96MG8 357 aaPredicted RBP8.62□□□□□ -1.03
HDAC6-221ENST00000477561 NAP1L5Q96NT1 182 aaPredicted RBP8.62□□□□□ -1.03
HDAC6-221ENST00000477561 CPXM1Q96SM3 734 aa8.62□□□□□ -1.03
HDAC6-221ENST00000477561 ACOX2Q99424 681 aa8.62□□□□□ -1.03
HDAC6-221ENST00000477561 PDCL3Q9H2J4 239 aa8.62□□□□□ -1.03
HDAC6-221ENST00000477561 GMEB2Q9UKD1 530 aa8.62□□□□□ -1.03
HDAC6-221ENST00000477561 SYNJ2BP-COX16A0A087WUM0 186 aa8.61□□□□□ -1.03
HDAC6-221ENST00000477561 CCDC163A0A0D9SF12 145 aa8.61□□□□□ -1.03
HDAC6-221ENST00000477561 TCRBV21S2A2A0A5A6 115 aa8.61□□□□□ -1.03
HDAC6-221ENST00000477561 LGALS16A8MUM7 142 aa8.61□□□□□ -1.03
HDAC6-221ENST00000477561 WASH3PC4AMC7 463 aa8.61□□□□□ -1.03
HDAC6-221ENST00000477561 SART1O43290 800 aaKnown RBP8.61□□□□□ -1.03
HDAC6-221ENST00000477561 MOCS2O96007 188 aaPredicted RBP8.61□□□□□ -1.03
HDAC6-221ENST00000477561 PENKP01210 267 aaPredicted RBP8.61□□□□□ -1.03
HDAC6-221ENST00000477561 ERBB2P04626 1255 aa8.61□□□□□ -1.03
HDAC6-221ENST00000477561 TPM1P09493 284 aa8.61□□□□□ -1.03
HDAC6-221ENST00000477561 CYP11B1P15538 503 aa8.61□□□□□ -1.03
HDAC6-221ENST00000477561 NTSR1P30989 418 aa8.61□□□□□ -1.03
HDAC6-221ENST00000477561 SGSHP51688 502 aa8.61□□□□□ -1.03
HDAC6-221ENST00000477561 YWHAZP63104 245 aaKnown RBP8.61□□□□□ -1.03
HDAC6-221ENST00000477561 PITX1P78337 314 aaPredicted RBP8.61□□□□□ -1.03
HDAC6-221ENST00000477561 UBXN1Q04323 297 aa8.61□□□□□ -1.03
HDAC6-221ENST00000477561 TRIM14Q14142 442 aa8.61□□□□□ -1.03
HDAC6-221ENST00000477561 CCDC6Q16204 474 aa8.61□□□□□ -1.03
HDAC6-221ENST00000477561 MEA1Q16626 185 aa8.61□□□□□ -1.03
HDAC6-221ENST00000477561 GEN1Q17RS7 908 aa8.61□□□□□ -1.03
HDAC6-221ENST00000477561 MPPE1Q53F39 396 aa8.61□□□□□ -1.03
HDAC6-221ENST00000477561 ADGRF1Q5T601 910 aa8.61□□□□□ -1.03
HDAC6-221ENST00000477561 SPECC1LQ69YQ0 1117 aa8.61□□□□□ -1.03
HDAC6-221ENST00000477561 LAIR1Q6GTX8 287 aa8.61□□□□□ -1.03
HDAC6-221ENST00000477561 OR6B2Q6IFH4 312 aa8.61□□□□□ -1.03
HDAC6-221ENST00000477561 RFWD3Q6PCD5 774 aa8.61□□□□□ -1.03
HDAC6-221ENST00000477561 FAM183BPQ6ZVS7 135 aa8.61□□□□□ -1.03
HDAC6-221ENST00000477561 APTXQ7Z2E3 356 aaKnown RBP8.61□□□□□ -1.03
HDAC6-221ENST00000477561 TAC4Q86UU9 113 aa8.61□□□□□ -1.03
HDAC6-221ENST00000477561 UNC45BQ8IWX7 931 aa8.61□□□□□ -1.03
HDAC6-221ENST00000477561 CHPFQ8IZ52 775 aa8.61□□□□□ -1.03
HDAC6-221ENST00000477561 MDGA1Q8NFP4 955 aa8.61□□□□□ -1.03
HDAC6-221ENST00000477561 HMGB4Q8WW32 186 aa8.61□□□□□ -1.03
HDAC6-221ENST00000477561 TMA16Q96EY4 203 aaKnown RBP8.61□□□□□ -1.03
HDAC6-221ENST00000477561 NAA15Q9BXJ9 866 aaKnown RBP8.61□□□□□ -1.03
HDAC6-221ENST00000477561 STK33Q9BYT3 514 aa8.61□□□□□ -1.03
HDAC6-221ENST00000477561 LHX5Q9H2C1 402 aa8.61□□□□□ -1.03
HDAC6-221ENST00000477561 SYNCQ9H7C4 482 aa8.61□□□□□ -1.03
HDAC6-221ENST00000477561 POLMQ9NP87 494 aaPredicted RBP8.61□□□□□ -1.03
HDAC6-221ENST00000477561 PARD6AQ9NPB6 346 aa8.61□□□□□ -1.03
HDAC6-221ENST00000477561 NLRC4Q9NPP4 1024 aa8.61□□□□□ -1.03
HDAC6-221ENST00000477561 FAM207AQ9NSI2 230 aaPredicted RBP8.61□□□□□ -1.03
HDAC6-221ENST00000477561 CACNA2D2Q9NY47 1150 aa8.61□□□□□ -1.03
HDAC6-221ENST00000477561 COX16Q9P0S2 106 aa8.61□□□□□ -1.03
HDAC6-221ENST00000477561 BCCIPQ9P287 314 aaKnown RBP eCLIP8.61□□□□□ -1.03
HDAC6-221ENST00000477561 FBXO10Q9UK96 956 aa8.61□□□□□ -1.03
HDAC6-221ENST00000477561 USP18Q9UMW8 372 aa8.61□□□□□ -1.03
HDAC6-221ENST00000477561 PCDHGC3Q9UN70 934 aa8.61□□□□□ -1.03
HDAC6-221ENST00000477561 STARD13Q9Y3M8 1113 aa8.61□□□□□ -1.03
HDAC6-221ENST00000477561 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.61□□□□□ -1.038e-7■■■□□ 18.4
HDAC6-221ENST00000477561 RAD54BQ9Y620 910 aa8.61□□□□□ -1.03
HDAC6-221ENST00000477561 GPR179Q6PRD1 2367 aa8.61□□□□□ -1.03
HDAC6-221ENST00000477561 RIF1Q5UIP0 2472 aaKnown RBP8.6□□□□□ -1.03
HDAC6-221ENST00000477561 ITIH6Q6UXX5 1313 aa8.6□□□□□ -1.03
HDAC6-221ENST00000477561 KIAA1549LQ6ZVL6 1849 aa8.6□□□□□ -1.03
HDAC6-221ENST00000477561 A0A1W2PQC6 194 aa8.6□□□□□ -1.03
HDAC6-221ENST00000477561 F8VZ95 297 aa8.6□□□□□ -1.03
HDAC6-221ENST00000477561 EPHB6O15197 1021 aa8.6□□□□□ -1.03
HDAC6-221ENST00000477561 ACSL4O60488 711 aa8.6□□□□□ -1.03
HDAC6-221ENST00000477561 TBL1XO60907 577 aa8.6□□□□□ -1.03
HDAC6-221ENST00000477561 ALDH1A2O94788 518 aa8.6□□□□□ -1.03
HDAC6-221ENST00000477561 GFPT2O94808 682 aa8.6□□□□□ -1.03
HDAC6-221ENST00000477561 TRUB2O95900 331 aaKnown RBP8.6□□□□□ -1.03
HDAC6-221ENST00000477561 IGLV3-27P01718 113 aa8.6□□□□□ -1.03
HDAC6-221ENST00000477561 HOXB2P14652 356 aa8.6□□□□□ -1.03
HDAC6-221ENST00000477561 HOXD9P28356 352 aaPredicted RBP8.6□□□□□ -1.03
HDAC6-221ENST00000477561 SLC6A4P31645 630 aa8.6□□□□□ -1.03
HDAC6-221ENST00000477561 GBP1P32455 592 aa8.6□□□□□ -1.03
HDAC6-221ENST00000477561 SLC11A2P49281 568 aa8.6□□□□□ -1.03
HDAC6-221ENST00000477561 BPIFB4P59827 614 aa8.6□□□□□ -1.03
HDAC6-221ENST00000477561 POLR2FP61218 127 aaKnown RBP8.6□□□□□ -1.03
HDAC6-221ENST00000477561 SYCP1Q15431 976 aa8.6□□□□□ -1.03
HDAC6-221ENST00000477561 HSF5Q4G112 596 aaPredicted RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 394.9 ms