RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 GOLGA6L7A0A1B0GV03 622 aa13.86□□□□□ -0.19
CPSF4-210ENST00000469897 SPAARA0A1B0GVQ0 90 aa13.86□□□□□ -0.19
CPSF4-210ENST00000469897 PSMA7O14818 248 aa13.86□□□□□ -0.19
CPSF4-210ENST00000469897 MSI1O43347 362 aaKnown RBP13.86□□□□□ -0.19
CPSF4-210ENST00000469897 OPHN1O60890 802 aa13.86□□□□□ -0.19
CPSF4-210ENST00000469897 EPHX1P07099 455 aa13.86□□□□□ -0.19
CPSF4-210ENST00000469897 PROS1P07225 676 aa13.86□□□□□ -0.19
CPSF4-210ENST00000469897 PAEPP09466 180 aa13.86□□□□□ -0.19
CPSF4-210ENST00000469897 SETSIPP0DME0 302 aa13.86□□□□□ -0.19
CPSF4-210ENST00000469897 TPMTP51580 245 aa13.86□□□□□ -0.19
CPSF4-210ENST00000469897 DAOAP59103 153 aa13.86□□□□□ -0.19
CPSF4-210ENST00000469897 NUCB2P80303 420 aa13.86□□□□□ -0.19
CPSF4-210ENST00000469897 PLEKHG6Q3KR16 790 aa13.86□□□□□ -0.19
CPSF4-210ENST00000469897 CCDC40Q4G0X9 1142 aa13.86□□□□□ -0.19
CPSF4-210ENST00000469897 WDR45BQ5MNZ6 344 aa13.86□□□□□ -0.19
CPSF4-210ENST00000469897 ADGRF1Q5T601 910 aa13.86□□□□□ -0.19
CPSF4-210ENST00000469897 KLHL10Q6JEL2 608 aa13.86□□□□□ -0.19
CPSF4-210ENST00000469897 RABEPKQ7Z6M1 372 aa13.86□□□□□ -0.19
CPSF4-210ENST00000469897 PPM1KQ8N3J5 372 aa13.86□□□□□ -0.19
CPSF4-210ENST00000469897 MINDY1Q8N5J2 469 aa13.86□□□□□ -0.19
CPSF4-210ENST00000469897 EHBP1Q8NDI1 1231 aa13.86□□□□□ -0.19
CPSF4-210ENST00000469897 LMO3Q8TAP4 145 aa13.86□□□□□ -0.19
CPSF4-210ENST00000469897 SLC35F5Q8WV83 523 aa13.86□□□□□ -0.19
CPSF4-210ENST00000469897 PRCCQ92733 491 aaPredicted RBP13.86□□□□□ -0.19
CPSF4-210ENST00000469897 SCNM1Q9BWG6 230 aa13.86□□□□□ -0.19
CPSF4-210ENST00000469897 CNGB3Q9NQW8 809 aa13.86□□□□□ -0.19
CPSF4-210ENST00000469897 STOML2Q9UJZ1 356 aa13.86□□□□□ -0.19
CPSF4-210ENST00000469897 PPP1R3GB7ZBB8 358 aa13.85□□□□□ -0.19
CPSF4-210ENST00000469897 SYPP08247 313 aa13.85□□□□□ -0.19
CPSF4-210ENST00000469897 ACADMP11310 421 aa13.85□□□□□ -0.19
CPSF4-210ENST00000469897 NCAM1P13591 858 aa13.85□□□□□ -0.19
CPSF4-210ENST00000469897 HLA-EP13747 358 aa13.85□□□□□ -0.19
CPSF4-210ENST00000469897 CD59P13987 128 aa13.85□□□□□ -0.19
CPSF4-210ENST00000469897 BMP6P22004 513 aa13.85□□□□□ -0.19
CPSF4-210ENST00000469897 PRKCHP24723 683 aa13.85□□□□□ -0.19
CPSF4-210ENST00000469897 BRD2P25440 801 aaKnown RBP13.85□□□□□ -0.19
CPSF4-210ENST00000469897 HOXD9P28356 352 aaPredicted RBP13.85□□□□□ -0.19
CPSF4-210ENST00000469897 HLA-FP30511 346 aa13.85□□□□□ -0.19
CPSF4-210ENST00000469897 COPAP53621 1224 aa13.85□□□□□ -0.19
CPSF4-210ENST00000469897 SIM1P81133 766 aaPredicted RBP13.85□□□□□ -0.19
CPSF4-210ENST00000469897 BECN1Q14457 450 aa13.85□□□□□ -0.19
CPSF4-210ENST00000469897 EIF4HQ15056 248 aaKnown RBP13.85□□□□□ -0.19
CPSF4-210ENST00000469897 SERPINA13PQ6UXR4 307 aa13.85□□□□□ -0.19
CPSF4-210ENST00000469897 CACUL1Q86Y37 369 aa13.85□□□□□ -0.19
CPSF4-210ENST00000469897 SCML4Q8N228 414 aa13.85□□□□□ -0.19
CPSF4-210ENST00000469897 CLEC4CQ8WTT0 213 aa13.85□□□□□ -0.19
CPSF4-210ENST00000469897 CYB5D2Q8WUJ1 264 aa13.85□□□□□ -0.19
CPSF4-210ENST00000469897 CEP63Q96MT8 703 aa13.85□□□□□ -0.19
CPSF4-210ENST00000469897 NT5C1BQ96P26 610 aa13.85□□□□□ -0.19
CPSF4-210ENST00000469897 MIS12Q9H081 205 aa13.85□□□□□ -0.19
CPSF4-210ENST00000469897 MIR1-1HGQ9H1L0 117 aa13.85□□□□□ -0.19
CPSF4-210ENST00000469897 USP36Q9P275 1121 aaKnown RBP13.85□□□□□ -0.19
CPSF4-210ENST00000469897 PLA2G4CQ9UP65 541 aa13.85□□□□□ -0.19
CPSF4-210ENST00000469897 HELZP42694 1942 aaKnown RBP13.85□□□□□ -0.19
CPSF4-210ENST00000469897 ABCA7Q8IZY2 2146 aa13.84□□□□□ -0.19
CPSF4-210ENST00000469897 EML5Q05BV3 1969 aa13.84□□□□□ -0.19
CPSF4-210ENST00000469897 METTL12A8MUP2 240 aa13.84□□□□□ -0.19
CPSF4-210ENST00000469897 MEI4A8MW99 385 aa13.84□□□□□ -0.19
CPSF4-210ENST00000469897 UPK3BL1B0FP48 263 aa13.84□□□□□ -0.19
CPSF4-210ENST00000469897 UPK3BL2E5RIL1 263 aa13.84□□□□□ -0.19
CPSF4-210ENST00000469897 BIN1O00499 593 aa13.84□□□□□ -0.19
CPSF4-210ENST00000469897 PMM2O15305 246 aa13.84□□□□□ -0.19
CPSF4-210ENST00000469897 GNSP15586 552 aa13.84□□□□□ -0.19
CPSF4-210ENST00000469897 OXTRP30559 389 aa13.84□□□□□ -0.19
CPSF4-210ENST00000469897 SGSHP51688 502 aa13.84□□□□□ -0.19
CPSF4-210ENST00000469897 STX17P56962 302 aa13.84□□□□□ -0.19
CPSF4-210ENST00000469897 FAM193AP78312 1265 aa13.84□□□□□ -0.19
CPSF4-210ENST00000469897 CETN1Q12798 172 aa13.84□□□□□ -0.19
CPSF4-210ENST00000469897 E2F5Q15329 346 aa13.84□□□□□ -0.19
CPSF4-210ENST00000469897 DCAF12L1Q5VU92 463 aa13.84□□□□□ -0.19
CPSF4-210ENST00000469897 TTI2Q6NXR4 508 aa13.84□□□□□ -0.19
CPSF4-210ENST00000469897 RFWD3Q6PCD5 774 aa13.84□□□□□ -0.19
CPSF4-210ENST00000469897 CHST9Q7L1S5 443 aa13.84□□□□□ -0.19
CPSF4-210ENST00000469897 ADIPOR2Q86V24 386 aa13.84□□□□□ -0.19
CPSF4-210ENST00000469897 FAM124AQ86V42 546 aa13.84□□□□□ -0.19
CPSF4-210ENST00000469897 ARHGEF19Q8IW93 802 aa13.84□□□□□ -0.19
CPSF4-210ENST00000469897 SCUBE3Q8IX30 993 aa13.84□□□□□ -0.19
CPSF4-210ENST00000469897 ELOA2Q8IYF1 753 aaPredicted RBP13.84□□□□□ -0.19
CPSF4-210ENST00000469897 ZNF366Q8N895 744 aa13.84□□□□□ -0.19
CPSF4-210ENST00000469897 CADM4Q8NFZ8 388 aa13.84□□□□□ -0.19
CPSF4-210ENST00000469897 NELFBQ8WX92 580 aa13.84□□□□□ -0.19
CPSF4-210ENST00000469897 DNASE2BQ8WZ79 361 aa13.84□□□□□ -0.19
CPSF4-210ENST00000469897 CAMK1GQ96NX5 476 aa13.84□□□□□ -0.19
CPSF4-210ENST00000469897 NUP58Q9BVL2 599 aa13.84□□□□□ -0.19
CPSF4-210ENST00000469897 ABCB8Q9NUT2 735 aa13.84□□□□□ -0.19
CPSF4-210ENST00000469897 SUSD2Q9UGT4 822 aa13.84□□□□□ -0.19
CPSF4-210ENST00000469897 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.84□□□□□ -0.19
CPSF4-210ENST00000469897 M0QYV0 167 aa13.83□□□□□ -0.2
CPSF4-210ENST00000469897 HYAL3O43820 417 aaPredicted RBP13.83□□□□□ -0.2
CPSF4-210ENST00000469897 SH3BP5O60239 455 aa13.83□□□□□ -0.2
CPSF4-210ENST00000469897 TBL1XO60907 577 aa13.83□□□□□ -0.2
CPSF4-210ENST00000469897 TBX4P57082 545 aa13.83□□□□□ -0.2
CPSF4-210ENST00000469897 KCNH2Q12809 1159 aa13.83□□□□□ -0.2
CPSF4-210ENST00000469897 FNDC3BQ53EP0 1204 aaKnown RBP13.83□□□□□ -0.2
CPSF4-210ENST00000469897 PIK3R6Q5UE93 754 aa13.83□□□□□ -0.2
CPSF4-210ENST00000469897 UNQ6494/PRO21346Q6UXR6 183 aa13.83□□□□□ -0.2
CPSF4-210ENST00000469897 KIAA0907Q7Z7F0 614 aaPredicted RBP13.83□□□□□ -0.2
CPSF4-210ENST00000469897 UNC45BQ8IWX7 931 aa13.83□□□□□ -0.2
CPSF4-210ENST00000469897 IRGQQ8WZA9 623 aa13.83□□□□□ -0.2
CPSF4-210ENST00000469897 HSFY1Q96LI6 401 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms