RNA–Protein interactions for RNA: ENST00000464654.1

TM9SF3-203, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 5

Gene TM9SF3, Length 658 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-203ENST00000464654 LAS2Q8IYD9 372 aa4.08□□□□□ -1.76
TM9SF3-203ENST00000464654 ASB12Q8WXK4 309 aa4.08□□□□□ -1.76
TM9SF3-203ENST00000464654 CELF1Q92879 486 aaKnown RBP4.08□□□□□ -1.76
TM9SF3-203ENST00000464654 TRMT61AQ96FX7 289 aaKnown RBP4.08□□□□□ -1.76
TM9SF3-203ENST00000464654 PCDHAC1Q9H158 963 aa4.08□□□□□ -1.76
TM9SF3-203ENST00000464654 MLXIPLQ9NP71 852 aa4.08□□□□□ -1.76
TM9SF3-203ENST00000464654 PAPOLBQ9NRJ5 636 aaKnown RBP4.08□□□□□ -1.76
TM9SF3-203ENST00000464654 ZMYND8Q9ULU4 1186 aaPredicted RBP4.08□□□□□ -1.76
TM9SF3-203ENST00000464654 EMSYQ7Z589 1322 aa4.07□□□□□ -1.76
TM9SF3-203ENST00000464654 CCDC187A0A096LP49 1063 aa4.07□□□□□ -1.76
TM9SF3-203ENST00000464654 GXYLT2A0PJZ3 443 aa4.07□□□□□ -1.76
TM9SF3-203ENST00000464654 SLC22A23A1A5C7 686 aa4.07□□□□□ -1.76
TM9SF3-203ENST00000464654 PRPF4O43172 522 aaKnown RBP eCLIP4.07□□□□□ -1.76
TM9SF3-203ENST00000464654 DHHO43323 396 aa4.07□□□□□ -1.76
TM9SF3-203ENST00000464654 ENO1P06733 434 aaKnown RBP4.07□□□□□ -1.76
TM9SF3-203ENST00000464654 IL6STP40189 918 aaPredicted RBP4.07□□□□□ -1.76
TM9SF3-203ENST00000464654 GSTM5P46439 218 aa4.07□□□□□ -1.76
TM9SF3-203ENST00000464654 SOX2P48431 317 aa4.07□□□□□ -1.76
TM9SF3-203ENST00000464654 ARL13BQ3SXY8 428 aa4.07□□□□□ -1.76
TM9SF3-203ENST00000464654 COBLL1Q53SF7 1204 aa4.07□□□□□ -1.76
TM9SF3-203ENST00000464654 RAP1GAP2Q684P5 730 aa4.07□□□□□ -1.76
TM9SF3-203ENST00000464654 ZNF548Q8NEK5 533 aaPredicted RBP4.07□□□□□ -1.76
TM9SF3-203ENST00000464654 MARK4Q96L34 752 aa4.07□□□□□ -1.76
TM9SF3-203ENST00000464654 TTLL2Q9BWV7 592 aa4.07□□□□□ -1.76
TM9SF3-203ENST00000464654 PCGF6Q9BYE7 350 aa4.07□□□□□ -1.76
TM9SF3-203ENST00000464654 CDCP1Q9H5V8 836 aa4.07□□□□□ -1.76
TM9SF3-203ENST00000464654 NECTIN3Q9NQS3 549 aa4.07□□□□□ -1.76
TM9SF3-203ENST00000464654 RGL1Q9NZL6 768 aa4.07□□□□□ -1.76
TM9SF3-203ENST00000464654 AGO2Q9UKV8 859 aaKnown RBP4.07□□□□□ -1.76
TM9SF3-203ENST00000464654 PCDHB2Q9Y5E7 798 aa4.07□□□□□ -1.76
TM9SF3-203ENST00000464654 TRBV5-3A0A0A0MS03 114 aa4.06□□□□□ -1.76
TM9SF3-203ENST00000464654 IGLV5-39A0A0G2JS06 123 aa4.06□□□□□ -1.76
TM9SF3-203ENST00000464654 ANO9A1A5B4 782 aa4.06□□□□□ -1.76
TM9SF3-203ENST00000464654 FAM90A8PA6NJQ4 464 aa4.06□□□□□ -1.76
TM9SF3-203ENST00000464654 B4DGG1 531 aa4.06□□□□□ -1.76
TM9SF3-203ENST00000464654 CTIFO43310 598 aaKnown RBP4.06□□□□□ -1.76
TM9SF3-203ENST00000464654 FGF18O76093 207 aa4.06□□□□□ -1.76
TM9SF3-203ENST00000464654 CRYABP02511 175 aaKnown RBP4.06□□□□□ -1.76
TM9SF3-203ENST00000464654 FGF2P09038 288 aa4.06□□□□□ -1.76
TM9SF3-203ENST00000464654 FAM90A13PP0C7W8 464 aa4.06□□□□□ -1.76
TM9SF3-203ENST00000464654 FAM90A24PP0C7X0 464 aa4.06□□□□□ -1.76
TM9SF3-203ENST00000464654 CCKARP32238 428 aa4.06□□□□□ -1.76
TM9SF3-203ENST00000464654 SLC8A1P32418 973 aa4.06□□□□□ -1.76
TM9SF3-203ENST00000464654 ALDH7A1P49419 539 aaKnown RBP4.06□□□□□ -1.76
TM9SF3-203ENST00000464654 VPS41P49754 854 aa4.06□□□□□ -1.76
TM9SF3-203ENST00000464654 DMWDQ09019 674 aa4.06□□□□□ -1.76
TM9SF3-203ENST00000464654 MTA1Q13330 715 aa4.06□□□□□ -1.76
TM9SF3-203ENST00000464654 GAB1Q13480 694 aa4.06□□□□□ -1.76
TM9SF3-203ENST00000464654 BFSP2Q13515 415 aa4.06□□□□□ -1.76
TM9SF3-203ENST00000464654 LVRNQ6Q4G3 990 aa4.06□□□□□ -1.76
TM9SF3-203ENST00000464654 CRELD2Q6UXH1 353 aaPredicted RBP4.06□□□□□ -1.76
TM9SF3-203ENST00000464654 KYAT3Q6YP21 454 aaKnown RBP4.06□□□□□ -1.76
TM9SF3-203ENST00000464654 COLCA1Q6ZS62 124 aa4.06□□□□□ -1.76
TM9SF3-203ENST00000464654 PIK3AP1Q6ZUJ8 805 aa4.06□□□□□ -1.76
TM9SF3-203ENST00000464654 SLC44A5Q8NCS7 719 aa4.06□□□□□ -1.76
TM9SF3-203ENST00000464654 PJA1Q8NG27 643 aa4.06□□□□□ -1.76
TM9SF3-203ENST00000464654 KAT2BQ92831 832 aa4.06□□□□□ -1.76
TM9SF3-203ENST00000464654 GRAMD1AQ96CP6 724 aa4.06□□□□□ -1.76
TM9SF3-203ENST00000464654 PAAF1Q9BRP4 392 aa4.06□□□□□ -1.76
TM9SF3-203ENST00000464654 TRIM2Q9C040 744 aa4.06□□□□□ -1.76
TM9SF3-203ENST00000464654 FAM234AQ9H0X4 552 aa4.06□□□□□ -1.76
TM9SF3-203ENST00000464654 KCNK9Q9NPC2 374 aa4.06□□□□□ -1.76
TM9SF3-203ENST00000464654 ZBTB40Q9NUA8 1239 aa4.06□□□□□ -1.76
TM9SF3-203ENST00000464654 CHPF2Q9P2E5 772 aa4.06□□□□□ -1.76
TM9SF3-203ENST00000464654 VPS4AQ9UN37 437 aa4.06□□□□□ -1.76
TM9SF3-203ENST00000464654 MAN2B2Q9Y2E5 1009 aa4.06□□□□□ -1.76
TM9SF3-203ENST00000464654 UBE2J1Q9Y385 318 aaPredicted RBP4.06□□□□□ -1.76
TM9SF3-203ENST00000464654 ZNF814B7Z6K7 855 aa4.05□□□□□ -1.76
TM9SF3-203ENST00000464654 H3BNX3 289 aa4.05□□□□□ -1.76
TM9SF3-203ENST00000464654 HNRNPDLO14979 420 aaKnown RBP4.05□□□□□ -1.76
TM9SF3-203ENST00000464654 PARNO95453 639 aaKnown RBP4.05□□□□□ -1.76
TM9SF3-203ENST00000464654 TNFRSF1BP20333 461 aa4.05□□□□□ -1.76
TM9SF3-203ENST00000464654 TBXAS1P24557 533 aaPredicted RBP4.05□□□□□ -1.76
TM9SF3-203ENST00000464654 YY1P25490 414 aa4.05□□□□□ -1.76
TM9SF3-203ENST00000464654 CCKBRP32239 447 aa4.05□□□□□ -1.76
TM9SF3-203ENST00000464654 TM4SF4P48230 202 aa4.05□□□□□ -1.76
TM9SF3-203ENST00000464654 CBFBQ13951 182 aa4.05□□□□□ -1.76
TM9SF3-203ENST00000464654 ELF2Q15723 593 aa4.05□□□□□ -1.76
TM9SF3-203ENST00000464654 MANEAQ5SRI9 462 aa4.05□□□□□ -1.76
TM9SF3-203ENST00000464654 ARL6IP4Q66PJ3 421 aaKnown RBP4.05□□□□□ -1.76
TM9SF3-203ENST00000464654 HIBCHQ6NVY1 386 aaPredicted RBP4.05□□□□□ -1.76
TM9SF3-203ENST00000464654 ZNF474Q6S9Z5 364 aaPredicted RBP4.05□□□□□ -1.76
TM9SF3-203ENST00000464654 TTC30AQ86WT1 665 aa4.05□□□□□ -1.76
TM9SF3-203ENST00000464654 GLIS1Q8NBF1 620 aa4.05□□□□□ -1.76
TM9SF3-203ENST00000464654 ZFPM2Q8WW38 1151 aa4.05□□□□□ -1.76
TM9SF3-203ENST00000464654 LYZL4Q96KX0 146 aa4.05□□□□□ -1.76
TM9SF3-203ENST00000464654 EIF3CQ99613 913 aaKnown RBP4.05□□□□□ -1.76
TM9SF3-203ENST00000464654 SCNM1Q9BWG6 230 aa4.05□□□□□ -1.76
TM9SF3-203ENST00000464654 NAA15Q9BXJ9 866 aaKnown RBP4.05□□□□□ -1.76
TM9SF3-203ENST00000464654 MOV10Q9HCE1 1003 aaKnown RBP4.05□□□□□ -1.76
TM9SF3-203ENST00000464654 HELLSQ9NRZ9 838 aa4.05□□□□□ -1.76
TM9SF3-203ENST00000464654 GEMIN8Q9NWZ8 242 aaKnown RBP4.05□□□□□ -1.76
TM9SF3-203ENST00000464654 PCDHA12Q9UN75 941 aa4.05□□□□□ -1.76
TM9SF3-203ENST00000464654 SQORQ9Y6N5 450 aa4.05□□□□□ -1.76
TM9SF3-203ENST00000464654 KIR2DS5A0A0G2JLQ3 304 aa4.04□□□□□ -1.76
TM9SF3-203ENST00000464654 KIR2DS3K7RE56 304 aa4.04□□□□□ -1.76
TM9SF3-203ENST00000464654 NPC1O15118 1278 aa4.04□□□□□ -1.76
TM9SF3-203ENST00000464654 PMM2O15305 246 aa4.04□□□□□ -1.76
TM9SF3-203ENST00000464654 PPM1GO15355 546 aaPredicted RBP4.04□□□□□ -1.76
TM9SF3-203ENST00000464654 NDST3O95803 873 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms