RNA–Protein interactions for RNA: ENST00000462723.1

RPA3-205, Transcript of replication protein A3, humanhuman

TSL 2

Gene RPA3, Length 989 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-205ENST00000462723 PRELID2Q8N945 189 aa8.5□□□□□ -1.05
RPA3-205ENST00000462723 MRPL43Q8N983 215 aaKnown RBP8.5□□□□□ -1.05
RPA3-205ENST00000462723 STKLD1Q8NE28 680 aa8.5□□□□□ -1.05
RPA3-205ENST00000462723 CCDC26Q8TAB7 109 aa8.5□□□□□ -1.05
RPA3-205ENST00000462723 ADAM32Q8TC27 787 aa8.5□□□□□ -1.05
RPA3-205ENST00000462723 SPPL3Q8TCT6 385 aa8.5□□□□□ -1.05
RPA3-205ENST00000462723 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.5□□□□□ -1.05
RPA3-205ENST00000462723 MICAL1Q8TDZ2 1067 aa8.5□□□□□ -1.05
RPA3-205ENST00000462723 POF1BQ8WVV4 589 aa8.5□□□□□ -1.05
RPA3-205ENST00000462723 OVCA2Q8WZ82 227 aa8.5□□□□□ -1.05
RPA3-205ENST00000462723 RNF34Q969K3 372 aa8.5□□□□□ -1.05
RPA3-205ENST00000462723 MAGOHBQ96A72 148 aaKnown RBP8.5□□□□□ -1.05
RPA3-205ENST00000462723 NTAN1Q96AB6 310 aa8.5□□□□□ -1.05
RPA3-205ENST00000462723 RUNDC3BQ96NL0 473 aa8.5□□□□□ -1.05
RPA3-205ENST00000462723 KLHL5Q96PQ7 755 aa8.5□□□□□ -1.05
RPA3-205ENST00000462723 TGS1Q96RS0 853 aaKnown RBP8.5□□□□□ -1.05
RPA3-205ENST00000462723 CDK5RAP1Q96SZ6 601 aaKnown RBP8.5□□□□□ -1.05
RPA3-205ENST00000462723 RHOXF2Q9BQY4 288 aa8.5□□□□□ -1.05
RPA3-205ENST00000462723 DDX47Q9H0S4 455 aaKnown RBP8.5□□□□□ -1.05
RPA3-205ENST00000462723 DHX35Q9H5Z1 703 aaKnown RBP8.5□□□□□ -1.05
RPA3-205ENST00000462723 NMUR1Q9HB89 426 aa8.5□□□□□ -1.05
RPA3-205ENST00000462723 PCDH18Q9HCL0 1135 aa8.5□□□□□ -1.05
RPA3-205ENST00000462723 TLR9Q9NR96 1032 aa8.5□□□□□ -1.05
RPA3-205ENST00000462723 OLA1Q9NTK5 396 aaKnown RBP8.5□□□□□ -1.05
RPA3-205ENST00000462723 PIGVQ9NUD9 493 aa8.5□□□□□ -1.05
RPA3-205ENST00000462723 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.5□□□□□ -1.05
RPA3-205ENST00000462723 GPATCH2LQ9NWQ4 482 aa8.5□□□□□ -1.05
RPA3-205ENST00000462723 MAGED2Q9UNF1 606 aaPredicted RBP8.5□□□□□ -1.05
RPA3-205ENST00000462723 AP4E1Q9UPM8 1137 aa8.5□□□□□ -1.05
RPA3-205ENST00000462723 INSL5Q9Y5Q6 135 aa8.5□□□□□ -1.05
RPA3-205ENST00000462723 TARSL2A2RTX5 802 aaKnown RBP8.49□□□□□ -1.05
RPA3-205ENST00000462723 C2orf71A6NGG8 1288 aa8.49□□□□□ -1.05
RPA3-205ENST00000462723 GRXCR1A8MXD5 290 aa8.49□□□□□ -1.05
RPA3-205ENST00000462723 H3BRJ5 948 aa8.49□□□□□ -1.05
RPA3-205ENST00000462723 TGM5O43548 720 aa8.49□□□□□ -1.05
RPA3-205ENST00000462723 CST8O60676 142 aa8.49□□□□□ -1.05
RPA3-205ENST00000462723 GLUD1P00367 558 aa8.49□□□□□ -1.05
RPA3-205ENST00000462723 IGLV3-25P01717 112 aa8.49□□□□□ -1.05
RPA3-205ENST00000462723 CD48P09326 243 aa8.49□□□□□ -1.05
RPA3-205ENST00000462723 SLC2A3P11169 496 aa8.49□□□□□ -1.05
RPA3-205ENST00000462723 RARGP13631 454 aa8.49□□□□□ -1.05
RPA3-205ENST00000462723 MCM3P25205 808 aa8.49□□□□□ -1.05
RPA3-205ENST00000462723 L1CAMP32004 1257 aa8.49□□□□□ -1.05
RPA3-205ENST00000462723 ADRA1BP35368 520 aa8.49□□□□□ -1.05
RPA3-205ENST00000462723 ARL4AP40617 200 aa8.49□□□□□ -1.05
RPA3-205ENST00000462723 PPP3CCP48454 512 aa8.49□□□□□ -1.05
RPA3-205ENST00000462723 FNTAP49354 379 aa8.49□□□□□ -1.05
RPA3-205ENST00000462723 ARSEP51690 589 aa8.49□□□□□ -1.05
RPA3-205ENST00000462723 ERVFC1P60507 584 aa8.49□□□□□ -1.05
RPA3-205ENST00000462723 SCAPQ12770 1279 aa8.49□□□□□ -1.05
RPA3-205ENST00000462723 TWF1Q12792 350 aa8.49□□□□□ -1.05
RPA3-205ENST00000462723 KLF1Q13351 362 aaPredicted RBP8.49□□□□□ -1.05
RPA3-205ENST00000462723 MTMR3Q13615 1198 aa8.49□□□□□ -1.05
RPA3-205ENST00000462723 DHX34Q14147 1143 aaKnown RBP8.49□□□□□ -1.05
RPA3-205ENST00000462723 DPYSL3Q14195 570 aa8.49□□□□□ -1.05
RPA3-205ENST00000462723 NAA30Q147X3 362 aaPredicted RBP8.49□□□□□ -1.05
RPA3-205ENST00000462723 SIX1Q15475 284 aaPredicted RBP8.49□□□□□ -1.05
RPA3-205ENST00000462723 RAB30Q15771 203 aa8.49□□□□□ -1.05
RPA3-205ENST00000462723 DPYSL2Q16555 572 aa8.49□□□□□ -1.05
RPA3-205ENST00000462723 CYP1B1Q16678 543 aa8.49□□□□□ -1.05
RPA3-205ENST00000462723 ZC3H12AQ5D1E8 599 aaKnown RBP8.49□□□□□ -1.05
RPA3-205ENST00000462723 PPP6R3Q5H9R7 873 aaPredicted RBP8.49□□□□□ -1.05
RPA3-205ENST00000462723 BRMS1LQ5PSV4 323 aa8.49□□□□□ -1.05
RPA3-205ENST00000462723 C10orf120Q5SQS8 335 aa8.49□□□□□ -1.05
RPA3-205ENST00000462723 PLPP4Q5VZY2 271 aa8.49□□□□□ -1.05
RPA3-205ENST00000462723 FAM109BQ6ICB4 259 aaPredicted RBP8.49□□□□□ -1.05
RPA3-205ENST00000462723 PDE12Q6L8Q7 609 aaKnown RBP8.49□□□□□ -1.05
RPA3-205ENST00000462723 BBS12Q6ZW61 710 aa8.49□□□□□ -1.05
RPA3-205ENST00000462723 TRIM46Q7Z4K8 759 aa8.49□□□□□ -1.05
RPA3-205ENST00000462723 RFX6Q8HWS3 928 aa8.49□□□□□ -1.05
RPA3-205ENST00000462723 C12orf50Q8NA57 414 aaPredicted RBP8.49□□□□□ -1.05
RPA3-205ENST00000462723 FAM71BQ8TC56 605 aa8.49□□□□□ -1.05
RPA3-205ENST00000462723 RUBCNQ92622 972 aa8.49□□□□□ -1.05
RPA3-205ENST00000462723 TRMT2BQ96GJ1 504 aaKnown RBP8.49□□□□□ -1.05
RPA3-205ENST00000462723 MYRFLQ96LU7 910 aa8.49□□□□□ -1.05
RPA3-205ENST00000462723 ZNF512Q96ME7 567 aaPredicted RBP8.49□□□□□ -1.05
RPA3-205ENST00000462723 SERPINB11Q96P15 392 aa8.49□□□□□ -1.05
RPA3-205ENST00000462723 ZNF670Q9BS34 389 aa8.49□□□□□ -1.05
RPA3-205ENST00000462723 HERPUD2Q9BSE4 406 aa8.49□□□□□ -1.05
RPA3-205ENST00000462723 LRRC1Q9BTT6 524 aa8.49□□□□□ -1.05
RPA3-205ENST00000462723 FRMD8P1Q9BZ68 369 aaPredicted RBP8.49□□□□□ -1.05
RPA3-205ENST00000462723 WDCPQ9H6R7 721 aa8.49□□□□□ -1.05
RPA3-205ENST00000462723 LRRC19Q9H756 370 aa8.49□□□□□ -1.05
RPA3-205ENST00000462723 PRDM16Q9HAZ2 1276 aa8.49□□□□□ -1.05
RPA3-205ENST00000462723 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.49□□□□□ -1.05
RPA3-205ENST00000462723 TRPM5Q9NZQ8 1165 aa8.49□□□□□ -1.05
RPA3-205ENST00000462723 CALCOCO1Q9P1Z2 691 aa8.49□□□□□ -1.05
RPA3-205ENST00000462723 RCOR3Q9P2K3 495 aaPredicted RBP8.49□□□□□ -1.05
RPA3-205ENST00000462723 UXTQ9UBK9 157 aaPredicted RBP8.49□□□□□ -1.05
RPA3-205ENST00000462723 FEZ2Q9UHY8 353 aaPredicted RBP8.49□□□□□ -1.05
RPA3-205ENST00000462723 MSRAQ9UJ68 235 aa8.49□□□□□ -1.05
RPA3-205ENST00000462723 FBXW11Q9UKB1 542 aa8.49□□□□□ -1.05
RPA3-205ENST00000462723 FZD10Q9ULW2 581 aa8.49□□□□□ -1.05
RPA3-205ENST00000462723 NR2E1Q9Y466 385 aa8.49□□□□□ -1.05
RPA3-205ENST00000462723 ASB3Q9Y575 518 aa8.49□□□□□ -1.05
RPA3-205ENST00000462723 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.48□□□□□ -1.05
RPA3-205ENST00000462723 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.48□□□□□ -1.05
RPA3-205ENST00000462723 GRM6O15303 877 aa8.48□□□□□ -1.05
RPA3-205ENST00000462723 IRAK2O43187 625 aa8.48□□□□□ -1.05
RPA3-205ENST00000462723 C1RP00736 705 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms