RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 GABRG2P18507 467 aa10.59□□□□□ -0.71
SF3A3-204ENST00000462258 EEF1GP26641 437 aaKnown RBP10.59□□□□□ -0.71
SF3A3-204ENST00000462258 P2RY2P41231 377 aa10.59□□□□□ -0.71
SF3A3-204ENST00000462258 SLC11A2P49281 568 aa10.59□□□□□ -0.71
SF3A3-204ENST00000462258 SGSHP51688 502 aa10.59□□□□□ -0.71
SF3A3-204ENST00000462258 TBX4P57082 545 aa10.59□□□□□ -0.71
SF3A3-204ENST00000462258 CREB5Q02930 508 aa10.59□□□□□ -0.71
SF3A3-204ENST00000462258 RING1Q06587 406 aa10.59□□□□□ -0.71
SF3A3-204ENST00000462258 NNTQ13423 1086 aa10.59□□□□□ -0.71
SF3A3-204ENST00000462258 EIF4HQ15056 248 aaKnown RBP10.59□□□□□ -0.71
SF3A3-204ENST00000462258 SF3A2Q15428 464 aaKnown RBP10.59□□□□□ -0.71
SF3A3-204ENST00000462258 AASDHQ4L235 1098 aaPredicted RBP10.59□□□□□ -0.71
SF3A3-204ENST00000462258 TCP11X2Q5H9J9 407 aa10.59□□□□□ -0.71
SF3A3-204ENST00000462258 ADGRF1Q5T601 910 aa10.59□□□□□ -0.71
SF3A3-204ENST00000462258 SMYD5Q6GMV2 418 aa10.59□□□□□ -0.71
SF3A3-204ENST00000462258 RBM43Q6ZSC3 357 aaKnown RBP10.59□□□□□ -0.71
SF3A3-204ENST00000462258 DGLUCYQ7Z3D6 616 aa10.59□□□□□ -0.71
SF3A3-204ENST00000462258 TAC4Q86UU9 113 aa10.59□□□□□ -0.71
SF3A3-204ENST00000462258 UNC45BQ8IWX7 931 aa10.59□□□□□ -0.71
SF3A3-204ENST00000462258 SCUBE3Q8IX30 993 aa10.59□□□□□ -0.71
SF3A3-204ENST00000462258 C12orf50Q8NA57 414 aaPredicted RBP10.59□□□□□ -0.71
SF3A3-204ENST00000462258 C1orf131Q8NDD1 294 aaKnown RBP10.59□□□□□ -0.71
SF3A3-204ENST00000462258 IPO4Q8TEX9 1081 aaKnown RBP10.59□□□□□ -0.71
SF3A3-204ENST00000462258 UCMAQ8WVF2 138 aa10.59□□□□□ -0.71
SF3A3-204ENST00000462258 RLN3Q8WXF3 142 aa10.59□□□□□ -0.71
SF3A3-204ENST00000462258 ERLEC1Q96DZ1 483 aa10.59□□□□□ -0.71
SF3A3-204ENST00000462258 PIWIL1Q96J94 861 aaKnown RBP10.59□□□□□ -0.71
SF3A3-204ENST00000462258 SLC2A11Q9BYW1 496 aa10.59□□□□□ -0.71
SF3A3-204ENST00000462258 SMOC1Q9H4F8 434 aa10.59□□□□□ -0.71
SF3A3-204ENST00000462258 CD248Q9HCU0 757 aa10.59□□□□□ -0.71
SF3A3-204ENST00000462258 TJP2Q9UDY2 1190 aa10.59□□□□□ -0.71
SF3A3-204ENST00000462258 DNAJC12Q9UKB3 198 aa10.59□□□□□ -0.71
SF3A3-204ENST00000462258 CLEC4EQ9ULY5 219 aa10.59□□□□□ -0.71
SF3A3-204ENST00000462258 PCDHGC3Q9UN70 934 aa10.59□□□□□ -0.71
SF3A3-204ENST00000462258 NAALADL1Q9UQQ1 740 aa10.59□□□□□ -0.71
SF3A3-204ENST00000462258 FHOD1Q9Y613 1164 aa10.59□□□□□ -0.71
SF3A3-204ENST00000462258 GFRA2O00451 464 aa10.58□□□□□ -0.72
SF3A3-204ENST00000462258 NPC1O15118 1278 aa10.58□□□□□ -0.72
SF3A3-204ENST00000462258 IRAK2O43187 625 aa10.58□□□□□ -0.72
SF3A3-204ENST00000462258 ZNF806P0C7X5 589 aa10.58□□□□□ -0.72
SF3A3-204ENST00000462258 NDUFV2P19404 249 aa10.58□□□□□ -0.72
SF3A3-204ENST00000462258 IL12RB1P42701 662 aa10.58□□□□□ -0.72
SF3A3-204ENST00000462258 DHPSP49366 369 aaPredicted RBP10.58□□□□□ -0.72
SF3A3-204ENST00000462258 PTK2Q05397 1052 aa10.58□□□□□ -0.72
SF3A3-204ENST00000462258 BYSLQ13895 437 aaKnown RBP10.58□□□□□ -0.72
SF3A3-204ENST00000462258 RAPGEF1Q13905 1077 aa10.58□□□□□ -0.72
SF3A3-204ENST00000462258 STARD3Q14849 445 aa10.58□□□□□ -0.72
SF3A3-204ENST00000462258 MAP7D1Q3KQU3 841 aa10.58□□□□□ -0.72
SF3A3-204ENST00000462258 FAM133BQ5BKY9 247 aaKnown RBP10.58□□□□□ -0.72
SF3A3-204ENST00000462258 PLA2G2CQ5R387 149 aa10.58□□□□□ -0.72
SF3A3-204ENST00000462258 TCEAL6Q6IPX3 200 aa10.58□□□□□ -0.72
SF3A3-204ENST00000462258 KIAA1211LQ6NV74 962 aa10.58□□□□□ -0.72
SF3A3-204ENST00000462258 RFWD3Q6PCD5 774 aa10.58□□□□□ -0.72
SF3A3-204ENST00000462258 BEND5Q7L4P6 421 aa10.58□□□□□ -0.72
SF3A3-204ENST00000462258 CYP2U1Q7Z449 544 aa10.58□□□□□ -0.72
SF3A3-204ENST00000462258 TMEM110Q86TL2 294 aa10.58□□□□□ -0.72
SF3A3-204ENST00000462258 SLC47A2Q86VL8 602 aa10.58□□□□□ -0.72
SF3A3-204ENST00000462258 ADAM32Q8TC27 787 aa10.58□□□□□ -0.72
SF3A3-204ENST00000462258 TCEAL3Q969E4 200 aa10.58□□□□□ -0.72
SF3A3-204ENST00000462258 FCRL2Q96LA5 508 aaPredicted RBP10.58□□□□□ -0.72
SF3A3-204ENST00000462258 PRICKLE1Q96MT3 831 aaPredicted RBP10.58□□□□□ -0.72
SF3A3-204ENST00000462258 NOX5Q96PH1 765 aa10.58□□□□□ -0.72
SF3A3-204ENST00000462258 CPXM1Q96SM3 734 aa10.58□□□□□ -0.72
SF3A3-204ENST00000462258 LSM14BQ9BX40 385 aaKnown RBP10.58□□□□□ -0.72
SF3A3-204ENST00000462258 CIPCQ9C0C6 399 aa10.58□□□□□ -0.72
SF3A3-204ENST00000462258 POPDC2Q9HBU9 364 aa10.58□□□□□ -0.72
SF3A3-204ENST00000462258 VPS45Q9NRW7 570 aa10.58□□□□□ -0.72
SF3A3-204ENST00000462258 TAB2Q9NYJ8 693 aa10.58□□□□□ -0.72
SF3A3-204ENST00000462258 TLR6Q9Y2C9 796 aa10.58□□□□□ -0.72
SF3A3-204ENST00000462258 CEP83Q9Y592 693 aa10.58□□□□□ -0.72
SF3A3-204ENST00000462258 STON1Q9Y6Q2 735 aa10.58□□□□□ -0.72
SF3A3-204ENST00000462258 LAMA1P25391 3075 aa10.57□□□□□ -0.72
SF3A3-204ENST00000462258 GOLGA6L7A0A1B0GV03 622 aa10.57□□□□□ -0.72
SF3A3-204ENST00000462258 BCLAF3A2AJT9 711 aaKnown RBP10.57□□□□□ -0.72
SF3A3-204ENST00000462258 TYW5A2RUC4 315 aaKnown RBP10.57□□□□□ -0.72
SF3A3-204ENST00000462258 SLC30A4O14863 429 aa10.57□□□□□ -0.72
SF3A3-204ENST00000462258 ZBTB24O43167 697 aaPredicted RBP10.57□□□□□ -0.72
SF3A3-204ENST00000462258 GDF9O60383 454 aa10.57□□□□□ -0.72
SF3A3-204ENST00000462258 ACSL4O60488 711 aa10.57□□□□□ -0.72
SF3A3-204ENST00000462258 MBD3O95983 291 aa10.57□□□□□ -0.72
SF3A3-204ENST00000462258 MOCS2O96007 188 aaPredicted RBP10.57□□□□□ -0.72
SF3A3-204ENST00000462258 APOEP02649 317 aa10.57□□□□□ -0.72
SF3A3-204ENST00000462258 HLA-FP30511 346 aa10.57□□□□□ -0.72
SF3A3-204ENST00000462258 SLC6A4P31645 630 aa10.57□□□□□ -0.72
SF3A3-204ENST00000462258 FOXK2Q01167 660 aa10.57□□□□□ -0.72
SF3A3-204ENST00000462258 ARID5AQ03989 594 aa10.57□□□□□ -0.72
SF3A3-204ENST00000462258 KCNMA1Q12791 1236 aa10.57□□□□□ -0.72
SF3A3-204ENST00000462258 ZNF234Q14588 700 aa10.57□□□□□ -0.72
SF3A3-204ENST00000462258 E2F5Q15329 346 aa10.57□□□□□ -0.72
SF3A3-204ENST00000462258 STX1AQ16623 288 aa10.57□□□□□ -0.72
SF3A3-204ENST00000462258 CDKAL1Q5VV42 579 aa10.57□□□□□ -0.72
SF3A3-204ENST00000462258 SYPL2Q5VXT5 272 aa10.57□□□□□ -0.72
SF3A3-204ENST00000462258 NADSYN1Q6IA69 706 aa10.57□□□□□ -0.72
SF3A3-204ENST00000462258 DPY19L2P1Q6NXN4 242 aa10.57□□□□□ -0.72
SF3A3-204ENST00000462258 C11orf57Q6ZUT1 292 aaPredicted RBP10.57□□□□□ -0.72
SF3A3-204ENST00000462258 FAM183BPQ6ZVS7 135 aa10.57□□□□□ -0.72
SF3A3-204ENST00000462258 ARMCX6Q7L4S7 300 aa10.57□□□□□ -0.72
SF3A3-204ENST00000462258 LPCAT2Q7L5N7 544 aa10.57□□□□□ -0.72
SF3A3-204ENST00000462258 FAM71AQ8IYT1 594 aa10.57□□□□□ -0.72
SF3A3-204ENST00000462258 AHI1Q8N157 1196 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms