RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 FAM149B1Q96BN6 582 aa19.71■□□□□ 0.75
COL5A1-203ENST00000460264 RTKNQ9BST9 563 aa19.71■□□□□ 0.75
COL5A1-203ENST00000460264 VPS45Q9NRW7 570 aa19.71■□□□□ 0.75
COL5A1-203ENST00000460264 CALCOCO1Q9P1Z2 691 aa19.71■□□□□ 0.75
COL5A1-203ENST00000460264 MBD1Q9UIS9 605 aaPredicted RBP19.71■□□□□ 0.75
COL5A1-203ENST00000460264 SLC30A4O14863 429 aa19.7■□□□□ 0.74
COL5A1-203ENST00000460264 PAPSS1O43252 624 aaPredicted RBP19.7■□□□□ 0.74
COL5A1-203ENST00000460264 TSPAN3O60637 253 aa19.7■□□□□ 0.74
COL5A1-203ENST00000460264 TBX4P57082 545 aa19.7■□□□□ 0.74
COL5A1-203ENST00000460264 PDCLQ13371 301 aa19.7■□□□□ 0.74
COL5A1-203ENST00000460264 NNTQ13423 1086 aa19.7■□□□□ 0.74
COL5A1-203ENST00000460264 AASDHQ4L235 1098 aaPredicted RBP19.7■□□□□ 0.74
COL5A1-203ENST00000460264 SMYD5Q6GMV2 418 aa19.7■□□□□ 0.74
COL5A1-203ENST00000460264 BEND5Q7L4P6 421 aa19.7■□□□□ 0.74
COL5A1-203ENST00000460264 TMEM110Q86TL2 294 aa19.7■□□□□ 0.74
COL5A1-203ENST00000460264 UNC45BQ8IWX7 931 aa19.7■□□□□ 0.74
COL5A1-203ENST00000460264 ERLEC1Q96DZ1 483 aa19.7■□□□□ 0.74
COL5A1-203ENST00000460264 GBP4Q96PP9 640 aa19.7■□□□□ 0.74
COL5A1-203ENST00000460264 RXFP3Q9NSD7 469 aa19.7■□□□□ 0.74
COL5A1-203ENST00000460264 NAALADL1Q9UQQ1 740 aa19.7■□□□□ 0.74
COL5A1-203ENST00000460264 RAD54BQ9Y620 910 aa19.7■□□□□ 0.74
COL5A1-203ENST00000460264 STON1Q9Y6Q2 735 aa19.7■□□□□ 0.74
COL5A1-203ENST00000460264 KCNJ18B7U540 433 aa19.69■□□□□ 0.74
COL5A1-203ENST00000460264 WASH3PC4AMC7 463 aa19.69■□□□□ 0.74
COL5A1-203ENST00000460264 NPC1O15118 1278 aa19.69■□□□□ 0.74
COL5A1-203ENST00000460264 NDUFV2P19404 249 aa19.69■□□□□ 0.74
COL5A1-203ENST00000460264 SLC11A2P49281 568 aa19.69■□□□□ 0.74
COL5A1-203ENST00000460264 SGSHP51688 502 aa19.69■□□□□ 0.74
COL5A1-203ENST00000460264 ENPP2Q13822 863 aa19.69■□□□□ 0.74
COL5A1-203ENST00000460264 BYSLQ13895 437 aaKnown RBP19.69■□□□□ 0.74
COL5A1-203ENST00000460264 KCNJ12Q14500 433 aa19.69■□□□□ 0.74
COL5A1-203ENST00000460264 EIF4HQ15056 248 aaKnown RBP19.69■□□□□ 0.74
COL5A1-203ENST00000460264 FAM133BQ5BKY9 247 aaKnown RBP19.69■□□□□ 0.74
COL5A1-203ENST00000460264 CT47A1Q5JQC4 288 aaPredicted RBP19.69■□□□□ 0.74
COL5A1-203ENST00000460264 TCEAL6Q6IPX3 200 aa19.69■□□□□ 0.74
COL5A1-203ENST00000460264 DPY19L2P1Q6NXN4 242 aa19.69■□□□□ 0.74
COL5A1-203ENST00000460264 GPT2Q8TD30 523 aa19.69■□□□□ 0.74
COL5A1-203ENST00000460264 TCEAL3Q969E4 200 aa19.69■□□□□ 0.74
COL5A1-203ENST00000460264 FCRL2Q96LA5 508 aaPredicted RBP19.69■□□□□ 0.74
COL5A1-203ENST00000460264 SERPINB11Q96P15 392 aa19.69■□□□□ 0.74
COL5A1-203ENST00000460264 TRIM62Q9BVG3 475 aa19.69■□□□□ 0.74
COL5A1-203ENST00000460264 SAMSN1Q9NSI8 373 aaKnown RBP19.69■□□□□ 0.74
COL5A1-203ENST00000460264 ELOVL2Q9NXB9 296 aa19.69■□□□□ 0.74
COL5A1-203ENST00000460264 THAP10Q9P2Z0 257 aaPredicted RBP19.69■□□□□ 0.74
COL5A1-203ENST00000460264 TJP2Q9UDY2 1190 aa19.69■□□□□ 0.74
COL5A1-203ENST00000460264 DNAJC12Q9UKB3 198 aa19.69■□□□□ 0.74
COL5A1-203ENST00000460264 SPTBN2O15020 2390 aa19.69■□□□□ 0.74
COL5A1-203ENST00000460264 NCOR2Q9Y618 2525 aa19.68■□□□□ 0.74
COL5A1-203ENST00000460264 MED19A0JLT2 244 aaPredicted RBP19.68■□□□□ 0.74
COL5A1-203ENST00000460264 MAP3K13O43283 966 aa19.68■□□□□ 0.74
COL5A1-203ENST00000460264 CAVIN2O95810 425 aa19.68■□□□□ 0.74
COL5A1-203ENST00000460264 PNMA6AP0CW24 399 aaPredicted RBP19.68■□□□□ 0.74
COL5A1-203ENST00000460264 HLA-FP30511 346 aa19.68■□□□□ 0.74
COL5A1-203ENST00000460264 IL12RB1P42701 662 aa19.68■□□□□ 0.74
COL5A1-203ENST00000460264 DHPSP49366 369 aaPredicted RBP19.68■□□□□ 0.74
COL5A1-203ENST00000460264 SYPL2Q5VXT5 272 aa19.68■□□□□ 0.74
COL5A1-203ENST00000460264 TMEM215Q68D42 235 aa19.68■□□□□ 0.74
COL5A1-203ENST00000460264 RNF43Q68DV7 783 aa19.68■□□□□ 0.74
COL5A1-203ENST00000460264 RFWD3Q6PCD5 774 aa19.68■□□□□ 0.74
COL5A1-203ENST00000460264 LPCAT2Q7L5N7 544 aa19.68■□□□□ 0.74
COL5A1-203ENST00000460264 CYP2U1Q7Z449 544 aa19.68■□□□□ 0.74
COL5A1-203ENST00000460264 TAC4Q86UU9 113 aa19.68■□□□□ 0.74
COL5A1-203ENST00000460264 PASD1Q8IV76 773 aa19.68■□□□□ 0.74
COL5A1-203ENST00000460264 WDTC1Q8N5D0 677 aa19.68■□□□□ 0.74
COL5A1-203ENST00000460264 ADAM32Q8TC27 787 aa19.68■□□□□ 0.74
COL5A1-203ENST00000460264 UCMAQ8WVF2 138 aa19.68■□□□□ 0.74
COL5A1-203ENST00000460264 AZIN2Q96A70 460 aa19.68■□□□□ 0.74
COL5A1-203ENST00000460264 TMA16Q96EY4 203 aaKnown RBP19.68■□□□□ 0.74
COL5A1-203ENST00000460264 CIPCQ9C0C6 399 aa19.68■□□□□ 0.74
COL5A1-203ENST00000460264 PCDHGC3Q9UN70 934 aa19.68■□□□□ 0.74
COL5A1-203ENST00000460264 TLR6Q9Y2C9 796 aa19.68■□□□□ 0.74
COL5A1-203ENST00000460264 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.67■□□□□ 0.74
COL5A1-203ENST00000460264 DCDC2BA2VCK2 349 aa19.67■□□□□ 0.74
COL5A1-203ENST00000460264 FOXN3O00409 490 aaPredicted RBP19.67■□□□□ 0.74
COL5A1-203ENST00000460264 ZBTB24O43167 697 aaPredicted RBP19.67■□□□□ 0.74
COL5A1-203ENST00000460264 IRAK2O43187 625 aa19.67■□□□□ 0.74
COL5A1-203ENST00000460264 ACSL4O60488 711 aa19.67■□□□□ 0.74
COL5A1-203ENST00000460264 SLC6A4P31645 630 aa19.67■□□□□ 0.74
COL5A1-203ENST00000460264 LIMK1P53667 647 aa19.67■□□□□ 0.74
COL5A1-203ENST00000460264 PTK2Q05397 1052 aa19.67■□□□□ 0.74
COL5A1-203ENST00000460264 ZNF234Q14588 700 aa19.67■□□□□ 0.74
COL5A1-203ENST00000460264 TCP11X2Q5H9J9 407 aa19.67■□□□□ 0.74
COL5A1-203ENST00000460264 MPP7Q5T2T1 576 aa19.67■□□□□ 0.74
COL5A1-203ENST00000460264 PIK3R6Q5UE93 754 aa19.67■□□□□ 0.74
COL5A1-203ENST00000460264 NADSYN1Q6IA69 706 aa19.67■□□□□ 0.74
COL5A1-203ENST00000460264 RBM43Q6ZSC3 357 aaKnown RBP19.67■□□□□ 0.74
COL5A1-203ENST00000460264 TMEFF1Q8IYR6 380 aa19.67■□□□□ 0.74
COL5A1-203ENST00000460264 SORCS1Q8WY21 1168 aa19.67■□□□□ 0.74
COL5A1-203ENST00000460264 SLC39A13Q96H72 371 aa19.67■□□□□ 0.74
COL5A1-203ENST00000460264 MRGPRX1Q96LB2 322 aa19.67■□□□□ 0.74
COL5A1-203ENST00000460264 PRICKLE1Q96MT3 831 aaPredicted RBP19.67■□□□□ 0.74
COL5A1-203ENST00000460264 CPXM1Q96SM3 734 aa19.67■□□□□ 0.74
COL5A1-203ENST00000460264 IRX2Q9BZI1 471 aaPredicted RBP19.67■□□□□ 0.74
COL5A1-203ENST00000460264 SLC6A17Q9H1V8 727 aa19.67■□□□□ 0.74
COL5A1-203ENST00000460264 POPDC2Q9HBU9 364 aa19.67■□□□□ 0.74
COL5A1-203ENST00000460264 NFE2L3Q9Y4A8 694 aa19.67■□□□□ 0.74
COL5A1-203ENST00000460264 GOLGA6L7A0A1B0GV03 622 aa19.66■□□□□ 0.74
COL5A1-203ENST00000460264 CAPN9O14815 690 aa19.66■□□□□ 0.74
COL5A1-203ENST00000460264 EEF1GP26641 437 aaKnown RBP19.66■□□□□ 0.74
COL5A1-203ENST00000460264 CLCN1P35523 988 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 128.2 ms