RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 GLRA2P23416 452 aa5.53□□□□□ -1.52
HMGB1P4-201ENST00000455362 CPT1AP50416 773 aa5.53□□□□□ -1.52
HMGB1P4-201ENST00000455362 NCKAP1LP55160 1127 aa5.53□□□□□ -1.52
HMGB1P4-201ENST00000455362 PRMT2P55345 433 aa5.53□□□□□ -1.52
HMGB1P4-201ENST00000455362 UBASH3AP57075 661 aa5.53□□□□□ -1.52
HMGB1P4-201ENST00000455362 C1QTNF8P60827 252 aa5.53□□□□□ -1.52
HMGB1P4-201ENST00000455362 NKX3-2P78367 333 aa5.53□□□□□ -1.52
HMGB1P4-201ENST00000455362 GTF2BQ00403 316 aa5.53□□□□□ -1.52
HMGB1P4-201ENST00000455362 FKBP3Q00688 224 aaKnown RBP5.53□□□□□ -1.52
HMGB1P4-201ENST00000455362 BEX3Q00994 111 aa5.53□□□□□ -1.52
HMGB1P4-201ENST00000455362 FMO1Q01740 532 aa5.53□□□□□ -1.52
HMGB1P4-201ENST00000455362 MAP2K1Q02750 393 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P4-201ENST00000455362 CCDC173Q0VFZ6 552 aa5.53□□□□□ -1.52
HMGB1P4-201ENST00000455362 FOXO1Q12778 655 aa5.53□□□□□ -1.52
HMGB1P4-201ENST00000455362 ALCAMQ13740 583 aa5.53□□□□□ -1.52
HMGB1P4-201ENST00000455362 SPIDRQ14159 915 aa5.53□□□□□ -1.52
HMGB1P4-201ENST00000455362 NR1I3Q14994 352 aa5.53□□□□□ -1.52
HMGB1P4-201ENST00000455362 PSMD6Q15008 389 aa5.53□□□□□ -1.52
HMGB1P4-201ENST00000455362 CNGA2Q16280 664 aa5.53□□□□□ -1.52
HMGB1P4-201ENST00000455362 EDRF1Q3B7T1 1238 aa5.53□□□□□ -1.52
HMGB1P4-201ENST00000455362 TCP11X2Q5H9J9 407 aa5.53□□□□□ -1.52
HMGB1P4-201ENST00000455362 FBXO47Q5MNV8 452 aa5.53□□□□□ -1.52
HMGB1P4-201ENST00000455362 MAP3K21Q5TCX8 1036 aa5.53□□□□□ -1.52
HMGB1P4-201ENST00000455362 JMJD6Q6NYC1 403 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P4-201ENST00000455362 LRRC55Q6ZSA7 311 aa5.53□□□□□ -1.52
HMGB1P4-201ENST00000455362 NEK10Q6ZWH5 1172 aa5.53□□□□□ -1.52
HMGB1P4-201ENST00000455362 STXBP4Q6ZWJ1 553 aa5.53□□□□□ -1.52
HMGB1P4-201ENST00000455362 CEP68Q76N32 757 aa5.53□□□□□ -1.52
HMGB1P4-201ENST00000455362 APTXQ7Z2E3 356 aaKnown RBP5.53□□□□□ -1.52
HMGB1P4-201ENST00000455362 RTN4RL1Q86UN2 441 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P4-201ENST00000455362 ZC3H3Q8IXZ2 948 aaKnown RBP5.53□□□□□ -1.52
HMGB1P4-201ENST00000455362 DNAJC5GQ8N7S2 189 aa5.53□□□□□ -1.52
HMGB1P4-201ENST00000455362 NKAIN3Q8N8D7 197 aa5.53□□□□□ -1.52
HMGB1P4-201ENST00000455362 RNF152Q8N8N0 203 aa5.53□□□□□ -1.52
HMGB1P4-201ENST00000455362 TMEM161BQ8NDZ6 487 aa5.53□□□□□ -1.52
HMGB1P4-201ENST00000455362 RAET1EQ8TD07 263 aa5.53□□□□□ -1.52
HMGB1P4-201ENST00000455362 PRPF31Q8WWY3 499 aaKnown RBP5.53□□□□□ -1.52
HMGB1P4-201ENST00000455362 KAT2BQ92831 832 aa5.53□□□□□ -1.52
HMGB1P4-201ENST00000455362 KCNN1Q92952 543 aa5.53□□□□□ -1.52
HMGB1P4-201ENST00000455362 KAT5Q92993 513 aa5.53□□□□□ -1.52
HMGB1P4-201ENST00000455362 LENG1Q96BZ8 264 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P4-201ENST00000455362 EEF2KMTQ96G04 330 aa5.53□□□□□ -1.52
HMGB1P4-201ENST00000455362 IFT74Q96LB3 600 aa5.53□□□□□ -1.52
HMGB1P4-201ENST00000455362 ACCSQ96QU6 501 aa5.53□□□□□ -1.52
HMGB1P4-201ENST00000455362 TSG101Q99816 390 aa5.53□□□□□ -1.52
HMGB1P4-201ENST00000455362 JPH2Q9BR39 696 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P4-201ENST00000455362 HDAC8Q9BY41 377 aa5.53□□□□□ -1.52
HMGB1P4-201ENST00000455362 XPO4Q9C0E2 1151 aaKnown RBP5.53□□□□□ -1.52
HMGB1P4-201ENST00000455362 SENP6Q9GZR1 1112 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P4-201ENST00000455362 POLR3FQ9H1D9 316 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P4-201ENST00000455362 UPF3AQ9H1J1 476 aaKnown RBP5.53□□□□□ -1.52
HMGB1P4-201ENST00000455362 IKZF4Q9H2S9 585 aa5.53□□□□□ -1.52
HMGB1P4-201ENST00000455362 CDIP1Q9H305 208 aa5.53□□□□□ -1.52
HMGB1P4-201ENST00000455362 POFUT1Q9H488 388 aa5.53□□□□□ -1.52
HMGB1P4-201ENST00000455362 NSMCE4AQ9NXX6 385 aa5.53□□□□□ -1.52
HMGB1P4-201ENST00000455362 IFNKQ9P0W0 207 aa5.53□□□□□ -1.52
HMGB1P4-201ENST00000455362 ZNF215Q9UL58 517 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P4-201ENST00000455362 TBX20Q9UMR3 447 aa5.53□□□□□ -1.52
HMGB1P4-201ENST00000455362 GPR34Q9UPC5 381 aa5.53□□□□□ -1.52
HMGB1P4-201ENST00000455362 TRAF3IP3Q9Y228 551 aa5.53□□□□□ -1.52
HMGB1P4-201ENST00000455362 KIAA0100Q14667 2235 aaKnown RBP5.53□□□□□ -1.52
HMGB1P4-201ENST00000455362 COL1A2P08123 1366 aa5.53□□□□□ -1.52
HMGB1P4-201ENST00000455362 SCN10AQ9Y5Y9 1956 aa5.53□□□□□ -1.52
HMGB1P4-201ENST00000455362 UBE4BO95155 1302 aa5.52□□□□□ -1.53
HMGB1P4-201ENST00000455362 SHISA3A0PJX4 238 aa5.52□□□□□ -1.53
HMGB1P4-201ENST00000455362 ISM1B1AKI9 464 aa5.52□□□□□ -1.53
HMGB1P4-201ENST00000455362 KCNJ18B7U540 433 aa5.52□□□□□ -1.53
HMGB1P4-201ENST00000455362 TISP43B9A030 160 aa5.52□□□□□ -1.53
HMGB1P4-201ENST00000455362 B9A039 149 aa5.52□□□□□ -1.53
HMGB1P4-201ENST00000455362 H0YCG3 227 aa5.52□□□□□ -1.53
HMGB1P4-201ENST00000455362 HAS3O00219 553 aa5.52□□□□□ -1.53
HMGB1P4-201ENST00000455362 SYT5O00445 386 aa5.52□□□□□ -1.53
HMGB1P4-201ENST00000455362 TRIM38O00635 465 aa5.52□□□□□ -1.53
HMGB1P4-201ENST00000455362 NPC1O15118 1278 aa5.52□□□□□ -1.53
HMGB1P4-201ENST00000455362 CETN3O15182 167 aa5.52□□□□□ -1.53
HMGB1P4-201ENST00000455362 ASAP2O43150 1006 aa5.52□□□□□ -1.53
HMGB1P4-201ENST00000455362 HOXC11O43248 304 aaPredicted RBP5.52□□□□□ -1.53
HMGB1P4-201ENST00000455362 CALUO43852 315 aaPredicted RBP5.52□□□□□ -1.53
HMGB1P4-201ENST00000455362 DGKIO75912 1065 aa5.52□□□□□ -1.53
HMGB1P4-201ENST00000455362 C22orf31O95567 290 aa5.52□□□□□ -1.53
HMGB1P4-201ENST00000455362 CBX7O95931 251 aa5.52□□□□□ -1.53
HMGB1P4-201ENST00000455362 HMGCRP04035 888 aa5.52□□□□□ -1.53
HMGB1P4-201ENST00000455362 KITP10721 976 aa5.52□□□□□ -1.53
HMGB1P4-201ENST00000455362 RARBP10826 455 aa5.52□□□□□ -1.53
HMGB1P4-201ENST00000455362 SCP2P22307 547 aa5.52□□□□□ -1.53
HMGB1P4-201ENST00000455362 KLRC1P26715 233 aa5.52□□□□□ -1.53
HMGB1P4-201ENST00000455362 OAS2P29728 719 aaKnown RBP5.52□□□□□ -1.53
HMGB1P4-201ENST00000455362 CCND3P30281 292 aaPredicted RBP5.52□□□□□ -1.53
HMGB1P4-201ENST00000455362 NAMPTP43490 491 aa5.52□□□□□ -1.53
HMGB1P4-201ENST00000455362 KIR3DL1P43629 444 aa5.52□□□□□ -1.53
HMGB1P4-201ENST00000455362 COPB1P53618 953 aaKnown RBP5.52□□□□□ -1.53
HMGB1P4-201ENST00000455362 SNRPFP62306 86 aaKnown RBP5.52□□□□□ -1.53
HMGB1P4-201ENST00000455362 PFKPQ01813 784 aa5.52□□□□□ -1.53
HMGB1P4-201ENST00000455362 SPAG1Q07617 926 aa5.52□□□□□ -1.53
HMGB1P4-201ENST00000455362 LAMTOR4Q0VGL1 99 aa5.52□□□□□ -1.53
HMGB1P4-201ENST00000455362 MALLQ13021 153 aa5.52□□□□□ -1.53
HMGB1P4-201ENST00000455362 DMP1Q13316 513 aaPredicted RBP5.52□□□□□ -1.53
HMGB1P4-201ENST00000455362 ADAM9Q13443 819 aa5.52□□□□□ -1.53
HMGB1P4-201ENST00000455362 DRP2Q13474 957 aa5.52□□□□□ -1.53
HMGB1P4-201ENST00000455362 TRPC3Q13507 836 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms