RNA–Protein interactions for RNA: ENST00000452520.1

HMGB1P26-201, Transcript of high mobility group box 1 pseudogene 26, humanhuman

BASIC

Gene HMGB1P26, Length 628 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P26-201ENST00000452520 LMAN2Q12907 356 aa5.69□□□□□ -1.5
HMGB1P26-201ENST00000452520 BFSP2Q13515 415 aa5.69□□□□□ -1.5
HMGB1P26-201ENST00000452520 FAM153CQ494X1 144 aa5.69□□□□□ -1.5
HMGB1P26-201ENST00000452520 TRIM60Q495X7 471 aa5.69□□□□□ -1.5
HMGB1P26-201ENST00000452520 RNASE12Q5GAN4 147 aaKnown RBP5.69□□□□□ -1.5
HMGB1P26-201ENST00000452520 TSTD2Q5T7W7 516 aa5.69□□□□□ -1.5
HMGB1P26-201ENST00000452520 ATPAF1Q5TC12 328 aaPredicted RBP5.69□□□□□ -1.5
HMGB1P26-201ENST00000452520 DENND2CQ68D51 928 aa5.69□□□□□ -1.5
HMGB1P26-201ENST00000452520 C2CD5Q86YS7 1000 aa5.69□□□□□ -1.5
HMGB1P26-201ENST00000452520 P3H2Q8IVL5 708 aa5.69□□□□□ -1.5
HMGB1P26-201ENST00000452520 SLC44A2Q8IWA5 706 aaPredicted RBP5.69□□□□□ -1.5
HMGB1P26-201ENST00000452520 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.69□□□□□ -1.5
HMGB1P26-201ENST00000452520 PNPLA1Q8N8W4 532 aa5.69□□□□□ -1.5
HMGB1P26-201ENST00000452520 GPATCH11Q8N954 259 aa5.69□□□□□ -1.5
HMGB1P26-201ENST00000452520 SPPL3Q8TCT6 385 aa5.69□□□□□ -1.5
HMGB1P26-201ENST00000452520 TBC1D5Q92609 795 aa5.69□□□□□ -1.5
HMGB1P26-201ENST00000452520 RUBCNQ92622 972 aa5.69□□□□□ -1.5
HMGB1P26-201ENST00000452520 PAAF1Q9BRP4 392 aa5.69□□□□□ -1.5
HMGB1P26-201ENST00000452520 CENPOQ9BU64 300 aa5.69□□□□□ -1.5
HMGB1P26-201ENST00000452520 RIC8AQ9NPQ8 531 aa5.69□□□□□ -1.5
HMGB1P26-201ENST00000452520 PRDM8Q9NQV8 689 aa5.69□□□□□ -1.5
HMGB1P26-201ENST00000452520 IL17RBQ9NRM6 502 aa5.69□□□□□ -1.5
HMGB1P26-201ENST00000452520 SNX15Q9NRS6 342 aa5.69□□□□□ -1.5
HMGB1P26-201ENST00000452520 TBC1D22BQ9NU19 505 aa5.69□□□□□ -1.5
HMGB1P26-201ENST00000452520 SLC17A6Q9P2U8 582 aa5.69□□□□□ -1.5
HMGB1P26-201ENST00000452520 FEM1BQ9UK73 627 aa5.69□□□□□ -1.5
HMGB1P26-201ENST00000452520 ZNF213O14771 459 aa5.68□□□□□ -1.5
HMGB1P26-201ENST00000452520 SUV39H1O43463 412 aa5.68□□□□□ -1.5
HMGB1P26-201ENST00000452520 ZNF37AP17032 561 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P26-201ENST00000452520 XBP1P17861 261 aa5.68□□□□□ -1.5
HMGB1P26-201ENST00000452520 MMP8P22894 467 aa5.68□□□□□ -1.5
HMGB1P26-201ENST00000452520 FPR3P25089 353 aa5.68□□□□□ -1.5
HMGB1P26-201ENST00000452520 AKT1P31749 480 aa5.68□□□□□ -1.5
HMGB1P26-201ENST00000452520 TUBP50607 506 aa5.68□□□□□ -1.5
HMGB1P26-201ENST00000452520 CYP4F2P78329 520 aa5.68□□□□□ -1.5
HMGB1P26-201ENST00000452520 NUCB1Q02818 461 aa5.68□□□□□ -1.5
HMGB1P26-201ENST00000452520 PRKG2Q13237 762 aa5.68□□□□□ -1.5
HMGB1P26-201ENST00000452520 ADCK5Q3MIX3 580 aa5.68□□□□□ -1.5
HMGB1P26-201ENST00000452520 LCE1DQ5T752 114 aa5.68□□□□□ -1.5
HMGB1P26-201ENST00000452520 PCSK4Q6UW60 755 aa5.68□□□□□ -1.5
HMGB1P26-201ENST00000452520 NAPRTQ6XQN6 538 aa5.68□□□□□ -1.5
HMGB1P26-201ENST00000452520 C4orf50Q6ZRC1 276 aa5.68□□□□□ -1.5
HMGB1P26-201ENST00000452520 FTSJ3Q8IY81 847 aaKnown RBP5.68□□□□□ -1.5
HMGB1P26-201ENST00000452520 C12orf76Q8N812 135 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P26-201ENST00000452520 FAM71DQ8N9W8 422 aa5.68□□□□□ -1.5
HMGB1P26-201ENST00000452520 SLC16A11Q8NCK7 471 aa5.68□□□□□ -1.5
HMGB1P26-201ENST00000452520 HERVK_113Q902F9 699 aa5.68□□□□□ -1.5
HMGB1P26-201ENST00000452520 MCRS1Q96EZ8 462 aa5.68□□□□□ -1.5
HMGB1P26-201ENST00000452520 BBC3Q96PG8 261 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P26-201ENST00000452520 SERINC2Q96SA4 455 aa5.68□□□□□ -1.5
HMGB1P26-201ENST00000452520 EIF3CQ99613 913 aaKnown RBP5.68□□□□□ -1.5
HMGB1P26-201ENST00000452520 DDX23Q9BUQ8 820 aaKnown RBP5.68□□□□□ -1.5
HMGB1P26-201ENST00000452520 DUSP26Q9BV47 211 aa5.68□□□□□ -1.5
HMGB1P26-201ENST00000452520 SYNPO2LQ9H987 977 aa5.68□□□□□ -1.5
HMGB1P26-201ENST00000452520 SAP30LQ9HAJ7 183 aa5.68□□□□□ -1.5
HMGB1P26-201ENST00000452520 KIF17Q9P2E2 1029 aa5.68□□□□□ -1.5
HMGB1P26-201ENST00000452520 SLC13A4Q9UKG4 626 aa5.68□□□□□ -1.5
HMGB1P26-201ENST00000452520 DAPP1Q9UN19 280 aa5.68□□□□□ -1.5
HMGB1P26-201ENST00000452520 PCDHB7Q9Y5E2 793 aa5.68□□□□□ -1.5
HMGB1P26-201ENST00000452520 DMRT1Q9Y5R6 373 aa5.68□□□□□ -1.5
HMGB1P26-201ENST00000452520 FNDC1Q4ZHG4 1894 aaPredicted RBP5.67□□□□□ -1.5
HMGB1P26-201ENST00000452520 FAM90A18PA6NE21 464 aa5.67□□□□□ -1.5
HMGB1P26-201ENST00000452520 FAM90A16PA6NEW6 464 aa5.67□□□□□ -1.5
HMGB1P26-201ENST00000452520 FAM90A9PA6NNJ1 464 aa5.67□□□□□ -1.5
HMGB1P26-201ENST00000452520 FAM90A5PA8MXJ8 464 aa5.67□□□□□ -1.5
HMGB1P26-201ENST00000452520 K7ENM7 598 aa5.67□□□□□ -1.5
HMGB1P26-201ENST00000452520 M0QZQ0 153 aa5.67□□□□□ -1.5
HMGB1P26-201ENST00000452520 HOXC11O43248 304 aaPredicted RBP5.67□□□□□ -1.5
HMGB1P26-201ENST00000452520 RPP40O75818 363 aaKnown RBP5.67□□□□□ -1.5
HMGB1P26-201ENST00000452520 HNRNPCP07910 306 aaKnown RBP eCLIP5.67□□□□□ -1.5
HMGB1P26-201ENST00000452520 FAM90A15PP0C7V4 464 aa5.67□□□□□ -1.5
HMGB1P26-201ENST00000452520 FAM90A14PP0C7W9 464 aa5.67□□□□□ -1.5
HMGB1P26-201ENST00000452520 TMIGD3P0DMS9 266 aaPredicted RBP5.67□□□□□ -1.5
HMGB1P26-201ENST00000452520 WT1P19544 449 aaPredicted RBP5.67□□□□□ -1.5
HMGB1P26-201ENST00000452520 SOX10P56693 466 aa5.67□□□□□ -1.5
HMGB1P26-201ENST00000452520 GPC5P78333 572 aa5.67□□□□□ -1.5
HMGB1P26-201ENST00000452520 ZNF362Q5T0B9 420 aaPredicted RBP5.67□□□□□ -1.5
HMGB1P26-201ENST00000452520 ANKRD45Q5TZF3 282 aa5.67□□□□□ -1.5
HMGB1P26-201ENST00000452520 KIRREL2Q6UWL6 708 aa5.67□□□□□ -1.5
HMGB1P26-201ENST00000452520 SLC29A4Q7RTT9 530 aa5.67□□□□□ -1.5
HMGB1P26-201ENST00000452520 ZNF804AQ7Z570 1209 aa5.67□□□□□ -1.5
HMGB1P26-201ENST00000452520 TRABD2AQ86V40 505 aa5.67□□□□□ -1.5
HMGB1P26-201ENST00000452520 TERB1Q8NA31 727 aa5.67□□□□□ -1.5
HMGB1P26-201ENST00000452520 SLC22A17Q8WUG5 538 aa5.67□□□□□ -1.5
HMGB1P26-201ENST00000452520 HTRA1Q92743 480 aa5.67□□□□□ -1.5
HMGB1P26-201ENST00000452520 EDC3Q96F86 508 aaKnown RBP5.67□□□□□ -1.5
HMGB1P26-201ENST00000452520 UROC1Q96N76 676 aa5.67□□□□□ -1.5
HMGB1P26-201ENST00000452520 BARD1Q99728 777 aaKnown RBP5.67□□□□□ -1.5
HMGB1P26-201ENST00000452520 MACROD1Q9BQ69 325 aa5.67□□□□□ -1.5
HMGB1P26-201ENST00000452520 CIPCQ9C0C6 399 aa5.67□□□□□ -1.5
HMGB1P26-201ENST00000452520 VPS16Q9H269 839 aa5.67□□□□□ -1.5
HMGB1P26-201ENST00000452520 SAYSD1Q9NPB0 183 aa5.67□□□□□ -1.5
HMGB1P26-201ENST00000452520 TFCP2L1Q9NZI6 479 aa5.67□□□□□ -1.5
HMGB1P26-201ENST00000452520 TLK1Q9UKI8 766 aa5.67□□□□□ -1.5
HMGB1P26-201ENST00000452520 ADAM21Q9UKJ8 722 aa5.67□□□□□ -1.5
HMGB1P26-201ENST00000452520 CNTN6Q9UQ52 1028 aa5.67□□□□□ -1.5
HMGB1P26-201ENST00000452520 PCDHB2Q9Y5E7 798 aa5.67□□□□□ -1.5
HMGB1P26-201ENST00000452520 GXYLT2A0PJZ3 443 aa5.66□□□□□ -1.5
HMGB1P26-201ENST00000452520 HMX3A6NHT5 357 aa5.66□□□□□ -1.5
HMGB1P26-201ENST00000452520 EXOC3O60645 756 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms