RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 FAM182AQ5T1J6 154 aa10.77□□□□□ -0.69
CPNE1-218ENST00000439806 OTUD1Q5VV17 481 aaPredicted RBP10.77□□□□□ -0.69
CPNE1-218ENST00000439806 UNC5AQ6ZN44 842 aa10.77□□□□□ -0.69
CPNE1-218ENST00000439806 HFE2Q6ZVN8 426 aa10.77□□□□□ -0.69
CPNE1-218ENST00000439806 PRPF39Q86UA1 669 aaKnown RBP10.77□□□□□ -0.69
CPNE1-218ENST00000439806 LRRC6Q86X45 466 aa10.77□□□□□ -0.69
CPNE1-218ENST00000439806 COLGALT1Q8NBJ5 622 aa10.77□□□□□ -0.69
CPNE1-218ENST00000439806 DEPDC1BQ8WUY9 529 aa10.77□□□□□ -0.69
CPNE1-218ENST00000439806 SPOCK2Q92563 424 aa10.77□□□□□ -0.69
CPNE1-218ENST00000439806 APBB2Q92870 758 aa10.77□□□□□ -0.69
CPNE1-218ENST00000439806 SMARCD1Q96GM5 515 aa10.77□□□□□ -0.69
CPNE1-218ENST00000439806 OLFM3Q96PB7 478 aa10.77□□□□□ -0.69
CPNE1-218ENST00000439806 SLC9A7Q96T83 725 aa10.77□□□□□ -0.69
CPNE1-218ENST00000439806 SMOQ99835 787 aa10.77□□□□□ -0.69
CPNE1-218ENST00000439806 EBNA1BP2Q99848 306 aaKnown RBP10.77□□□□□ -0.69
CPNE1-218ENST00000439806 SENP6Q9GZR1 1112 aaPredicted RBP10.77□□□□□ -0.69
CPNE1-218ENST00000439806 CNGB3Q9NQW8 809 aa10.77□□□□□ -0.69
CPNE1-218ENST00000439806 KLC4Q9NSK0 619 aa10.77□□□□□ -0.69
CPNE1-218ENST00000439806 MIOSQ9NXC5 875 aa10.77□□□□□ -0.69
CPNE1-218ENST00000439806 RRN3Q9NYV6 651 aa10.77□□□□□ -0.69
CPNE1-218ENST00000439806 SEPT10Q9P0V9 454 aa10.77□□□□□ -0.69
CPNE1-218ENST00000439806 SLC17A7Q9P2U7 560 aa10.77□□□□□ -0.69
CPNE1-218ENST00000439806 GRID1Q9ULK0 1009 aa10.77□□□□□ -0.69
CPNE1-218ENST00000439806 TIMM13Q9Y5L4 95 aaPredicted RBP10.77□□□□□ -0.69
CPNE1-218ENST00000439806 SHROOM3Q8TF72 1996 aa10.77□□□□□ -0.69
CPNE1-218ENST00000439806 ARL5CA6NH57 179 aa10.76□□□□□ -0.69
CPNE1-218ENST00000439806 C9IYK1 514 aa10.76□□□□□ -0.69
CPNE1-218ENST00000439806 COPEO14579 308 aa10.76□□□□□ -0.69
CPNE1-218ENST00000439806 OPHN1O60890 802 aa10.76□□□□□ -0.69
CPNE1-218ENST00000439806 RASSF9O75901 435 aa10.76□□□□□ -0.69
CPNE1-218ENST00000439806 DCTN3O75935 186 aa10.76□□□□□ -0.69
CPNE1-218ENST00000439806 KRT38O76015 456 aa10.76□□□□□ -0.69
CPNE1-218ENST00000439806 PGK1P00558 417 aa10.76□□□□□ -0.69
CPNE1-218ENST00000439806 CHRNA1P02708 482 aa10.76□□□□□ -0.69
CPNE1-218ENST00000439806 LTFP02788 710 aa10.76□□□□□ -0.69
CPNE1-218ENST00000439806 MYCNP04198 464 aaPredicted RBP10.76□□□□□ -0.69
CPNE1-218ENST00000439806 PYGBP11216 843 aa10.76□□□□□ -0.69
CPNE1-218ENST00000439806 MLNP12872 115 aa10.76□□□□□ -0.69
CPNE1-218ENST00000439806 THPOP40225 353 aa10.76□□□□□ -0.69
CPNE1-218ENST00000439806 GLUD2P49448 558 aa10.76□□□□□ -0.69
CPNE1-218ENST00000439806 NEK3P51956 506 aa10.76□□□□□ -0.69
CPNE1-218ENST00000439806 NCALDP61601 193 aa10.76□□□□□ -0.69
CPNE1-218ENST00000439806 CDK16Q00536 496 aa10.76□□□□□ -0.69
CPNE1-218ENST00000439806 MGAT3Q09327 533 aa10.76□□□□□ -0.69
CPNE1-218ENST00000439806 CCDC15Q0P6D6 951 aa10.76□□□□□ -0.69
CPNE1-218ENST00000439806 BNIP1Q12981 228 aa10.76□□□□□ -0.69
CPNE1-218ENST00000439806 SNCBQ16143 134 aa10.76□□□□□ -0.69
CPNE1-218ENST00000439806 ARL13BQ3SXY8 428 aa10.76□□□□□ -0.69
CPNE1-218ENST00000439806 GALNTL6Q49A17 601 aa10.76□□□□□ -0.69
CPNE1-218ENST00000439806 KIAA0319Q5VV43 1072 aa10.76□□□□□ -0.69
CPNE1-218ENST00000439806 SYPL2Q5VXT5 272 aa10.76□□□□□ -0.69
CPNE1-218ENST00000439806 CYB5D1Q6P9G0 228 aa10.76□□□□□ -0.69
CPNE1-218ENST00000439806 RFX8Q6ZV50 586 aa10.76□□□□□ -0.69
CPNE1-218ENST00000439806 ZNF534Q76KX8 674 aa10.76□□□□□ -0.69
CPNE1-218ENST00000439806 MRPL10Q7Z7H8 261 aaKnown RBP10.76□□□□□ -0.69
CPNE1-218ENST00000439806 SERINC5Q86VE9 423 aa10.76□□□□□ -0.69
CPNE1-218ENST00000439806 ECHDC2Q86YB7 292 aa10.76□□□□□ -0.69
CPNE1-218ENST00000439806 TRIM42Q8IWZ5 723 aa10.76□□□□□ -0.69
CPNE1-218ENST00000439806 AGGF1Q8N302 714 aaeCLIP10.76□□□□□ -0.69
CPNE1-218ENST00000439806 RNF169Q8NCN4 708 aa10.76□□□□□ -0.69
CPNE1-218ENST00000439806 CCNYQ8ND76 341 aa10.76□□□□□ -0.69
CPNE1-218ENST00000439806 NT5C3BQ969T7 300 aa10.76□□□□□ -0.69
CPNE1-218ENST00000439806 MYLPFQ96A32 169 aa10.76□□□□□ -0.69
CPNE1-218ENST00000439806 NTAN1Q96AB6 310 aa10.76□□□□□ -0.69
CPNE1-218ENST00000439806 PGBD4Q96DM1 585 aa10.76□□□□□ -0.69
CPNE1-218ENST00000439806 MTBPQ96DY7 904 aa10.76□□□□□ -0.69
CPNE1-218ENST00000439806 STAMBPL1Q96FJ0 436 aa10.76□□□□□ -0.69
CPNE1-218ENST00000439806 THOC1Q96FV9 657 aaKnown RBP10.76□□□□□ -0.69
CPNE1-218ENST00000439806 SERAC1Q96JX3 654 aa10.76□□□□□ -0.69
CPNE1-218ENST00000439806 SIGLEC10Q96LC7 697 aa10.76□□□□□ -0.69
CPNE1-218ENST00000439806 RMDN2Q96LZ7 410 aa10.76□□□□□ -0.69
CPNE1-218ENST00000439806 VPS11Q9H270 941 aa10.76□□□□□ -0.69
CPNE1-218ENST00000439806 NMRK2Q9NPI5 230 aa10.76□□□□□ -0.69
CPNE1-218ENST00000439806 EIF2B3Q9NR50 452 aaKnown RBP10.76□□□□□ -0.69
CPNE1-218ENST00000439806 TMPRSS4Q9NRS4 437 aa10.76□□□□□ -0.69
CPNE1-218ENST00000439806 TXLNGQ9NUQ3 528 aa10.76□□□□□ -0.69
CPNE1-218ENST00000439806 RAD54BQ9Y620 910 aa10.76□□□□□ -0.69
CPNE1-218ENST00000439806 PTPRDP23468 1912 aa10.76□□□□□ -0.69
CPNE1-218ENST00000439806 CASP8AP2Q9UKL3 1982 aa10.76□□□□□ -0.69
CPNE1-218ENST00000439806 ARHGEF37A1IGU5 675 aa10.75□□□□□ -0.69
CPNE1-218ENST00000439806 MYBPHLA2RUH7 354 aa10.75□□□□□ -0.69
CPNE1-218ENST00000439806 FAM159BA6NKW6 160 aa10.75□□□□□ -0.69
CPNE1-218ENST00000439806 F5H423 210 aaPredicted RBP10.75□□□□□ -0.69
CPNE1-218ENST00000439806 NRP1O14786 923 aa10.75□□□□□ -0.69
CPNE1-218ENST00000439806 HGSO14964 777 aaPredicted RBP10.75□□□□□ -0.69
CPNE1-218ENST00000439806 F9P00740 461 aa10.75□□□□□ -0.69
CPNE1-218ENST00000439806 USP17L7P0C7H9 530 aa10.75□□□□□ -0.69
CPNE1-218ENST00000439806 NCAM1P13591 858 aa10.75□□□□□ -0.69
CPNE1-218ENST00000439806 ADRA1BP35368 520 aa10.75□□□□□ -0.69
CPNE1-218ENST00000439806 CCNFP41002 786 aa10.75□□□□□ -0.69
CPNE1-218ENST00000439806 MAGEA3P43357 314 aa10.75□□□□□ -0.69
CPNE1-218ENST00000439806 RABGGTBP53611 331 aa10.75□□□□□ -0.69
CPNE1-218ENST00000439806 DPYSQ14117 519 aa10.75□□□□□ -0.69
CPNE1-218ENST00000439806 PARP6Q2NL67 630 aa10.75□□□□□ -0.69
CPNE1-218ENST00000439806 CASC4Q6P4E1 433 aa10.75□□□□□ -0.69
CPNE1-218ENST00000439806 LRRC8BQ6P9F7 803 aa10.75□□□□□ -0.69
CPNE1-218ENST00000439806 AGMOQ6ZNB7 445 aa10.75□□□□□ -0.69
CPNE1-218ENST00000439806 OTOAQ7RTW8 1153 aa10.75□□□□□ -0.69
CPNE1-218ENST00000439806 BNIPLQ7Z465 357 aa10.75□□□□□ -0.69
CPNE1-218ENST00000439806 TBC1D1Q86TI0 1168 aaPredicted RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms