RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 FYB2Q5VWT5 728 aa12.28□□□□□ -0.44
HSPG2-206ENST00000439717 HGSNATQ68CP4 663 aa12.28□□□□□ -0.44
HSPG2-206ENST00000439717 NUDT18Q6ZVK8 323 aa12.28□□□□□ -0.44
HSPG2-206ENST00000439717 VPS36Q86VN1 386 aa12.28□□□□□ -0.44
HSPG2-206ENST00000439717 C1orf210Q8IVY1 113 aa12.28□□□□□ -0.44
HSPG2-206ENST00000439717 DRC7Q8IY82 874 aa12.28□□□□□ -0.44
HSPG2-206ENST00000439717 C3orf20Q8ND61 904 aa12.28□□□□□ -0.44
HSPG2-206ENST00000439717 PGAP3Q96FM1 320 aaPredicted RBP12.28□□□□□ -0.44
HSPG2-206ENST00000439717 BTN2A3PQ96KV6 586 aa12.28□□□□□ -0.44
HSPG2-206ENST00000439717 TRIM5Q9C035 493 aa12.28□□□□□ -0.44
HSPG2-206ENST00000439717 IRF2BPLQ9H1B7 796 aa12.28□□□□□ -0.44
HSPG2-206ENST00000439717 RBM12Q9NTZ6 932 aaKnown RBP12.28□□□□□ -0.44
HSPG2-206ENST00000439717 PAXBP1Q9Y5B6 917 aa12.28□□□□□ -0.44
HSPG2-206ENST00000439717 MIA3Q5JRA6 1907 aa12.28□□□□□ -0.44
HSPG2-206ENST00000439717 KCNU1A8MYU2 1149 aa12.27□□□□□ -0.45
HSPG2-206ENST00000439717 CHURC1-FNTBB4DL54 471 aa12.27□□□□□ -0.45
HSPG2-206ENST00000439717 DDX3XO00571 662 aaKnown RBP eCLIP12.27□□□□□ -0.451e-11■□□□□ 10.6
HSPG2-206ENST00000439717 ATG13O75143 517 aa12.27□□□□□ -0.45
HSPG2-206ENST00000439717 KAT7O95251 611 aa12.27□□□□□ -0.45
HSPG2-206ENST00000439717 KRT3P12035 628 aa12.27□□□□□ -0.45
HSPG2-206ENST00000439717 SKILP12757 684 aa12.27□□□□□ -0.45
HSPG2-206ENST00000439717 ABCB4P21439 1286 aa12.27□□□□□ -0.45
HSPG2-206ENST00000439717 FLT3P36888 993 aa12.27□□□□□ -0.45
HSPG2-206ENST00000439717 TNFRSF4P43489 277 aa12.27□□□□□ -0.45
HSPG2-206ENST00000439717 SULT1E1P49888 294 aa12.27□□□□□ -0.45
HSPG2-206ENST00000439717 PTPN5P54829 565 aa12.27□□□□□ -0.45
HSPG2-206ENST00000439717 PITX1P78337 314 aaPredicted RBP12.27□□□□□ -0.45
HSPG2-206ENST00000439717 ARID5BQ14865 1188 aa12.27□□□□□ -0.45
HSPG2-206ENST00000439717 TDRD12Q587J7 1177 aaKnown RBP12.27□□□□□ -0.45
HSPG2-206ENST00000439717 FAM133BQ5BKY9 247 aaKnown RBP12.27□□□□□ -0.45
HSPG2-206ENST00000439717 ZC3H12AQ5D1E8 599 aaKnown RBP12.27□□□□□ -0.45
HSPG2-206ENST00000439717 BRMS1LQ5PSV4 323 aa12.27□□□□□ -0.45
HSPG2-206ENST00000439717 MPP7Q5T2T1 576 aa12.27□□□□□ -0.45
HSPG2-206ENST00000439717 NAIF1Q69YI7 327 aaPredicted RBP12.27□□□□□ -0.45
HSPG2-206ENST00000439717 GRAMD4Q6IC98 578 aa12.27□□□□□ -0.45
HSPG2-206ENST00000439717 SND1Q7KZF4 910 aaKnown RBP eCLIP12.27□□□□□ -0.452e-9■■■■■ 44.9
HSPG2-206ENST00000439717 C12orf40Q86WS4 652 aa12.27□□□□□ -0.45
HSPG2-206ENST00000439717 GAS2L3Q86XJ1 694 aa12.27□□□□□ -0.45
HSPG2-206ENST00000439717 MCOLN2Q8IZK6 566 aa12.27□□□□□ -0.45
HSPG2-206ENST00000439717 PHTF2Q8N3S3 785 aa12.27□□□□□ -0.45
HSPG2-206ENST00000439717 SPEM1Q8N4L4 309 aa12.27□□□□□ -0.45
HSPG2-206ENST00000439717 NAT16Q8N8M0 369 aa12.27□□□□□ -0.45
HSPG2-206ENST00000439717 ATP6V0D2Q8N8Y2 350 aa12.27□□□□□ -0.45
HSPG2-206ENST00000439717 OR8K1Q8NGG5 319 aa12.27□□□□□ -0.45
HSPG2-206ENST00000439717 KCNV2Q8TDN2 545 aa12.27□□□□□ -0.45
HSPG2-206ENST00000439717 DDI1Q8WTU0 396 aa12.27□□□□□ -0.45
HSPG2-206ENST00000439717 TMA16Q96EY4 203 aaKnown RBP12.27□□□□□ -0.45
HSPG2-206ENST00000439717 SELENOOQ9BVL4 669 aa12.27□□□□□ -0.45
HSPG2-206ENST00000439717 SLC2A11Q9BYW1 496 aa12.27□□□□□ -0.45
HSPG2-206ENST00000439717 ARHGEF4Q9NR80 690 aa12.27□□□□□ -0.45
HSPG2-206ENST00000439717 METTL5Q9NRN9 209 aaKnown RBP12.27□□□□□ -0.45
HSPG2-206ENST00000439717 DNAJC17Q9NVM6 304 aaKnown RBP12.27□□□□□ -0.45
HSPG2-206ENST00000439717 SPATA6Q9NWH7 488 aaPredicted RBP12.27□□□□□ -0.45
HSPG2-206ENST00000439717 FBXO10Q9UK96 956 aa12.27□□□□□ -0.45
HSPG2-206ENST00000439717 F5P12259 2224 aa12.26□□□□□ -0.45
HSPG2-206ENST00000439717 ZNF318Q5VUA4 2279 aa12.26□□□□□ -0.45
HSPG2-206ENST00000439717 ZDBF2Q9HCK1 2354 aa12.26□□□□□ -0.45
HSPG2-206ENST00000439717 FAM170AA1A519 330 aa12.26□□□□□ -0.45
HSPG2-206ENST00000439717 ANKRD62A6NC57 917 aa12.26□□□□□ -0.45
HSPG2-206ENST00000439717 SIGLEC16A6NMB1 481 aa12.26□□□□□ -0.45
HSPG2-206ENST00000439717 K7EQS6 105 aa12.26□□□□□ -0.45
HSPG2-206ENST00000439717 LAMTOR5O43504 91 aa12.26□□□□□ -0.45
HSPG2-206ENST00000439717 RTN2O75298 545 aa12.26□□□□□ -0.45
HSPG2-206ENST00000439717 CISD3P0C7P0 127 aa12.26□□□□□ -0.45
HSPG2-206ENST00000439717 DGKGP49619 791 aa12.26□□□□□ -0.45
HSPG2-206ENST00000439717 CXCR3P49682 368 aa12.26□□□□□ -0.45
HSPG2-206ENST00000439717 CCR3P51677 355 aa12.26□□□□□ -0.45
HSPG2-206ENST00000439717 DEUP1Q05D60 604 aa12.26□□□□□ -0.45
HSPG2-206ENST00000439717 MTAPQ13126 283 aa12.26□□□□□ -0.45
HSPG2-206ENST00000439717 NME3Q13232 169 aa12.26□□□□□ -0.45
HSPG2-206ENST00000439717 TSR1Q2NL82 804 aaKnown RBP12.26□□□□□ -0.45
HSPG2-206ENST00000439717 ACBD5Q5T8D3 534 aaPredicted RBP12.26□□□□□ -0.45
HSPG2-206ENST00000439717 PIK3R6Q5UE93 754 aa12.26□□□□□ -0.45
HSPG2-206ENST00000439717 OTUD1Q5VV17 481 aaPredicted RBP12.26□□□□□ -0.45
HSPG2-206ENST00000439717 NADSYN1Q6IA69 706 aa12.26□□□□□ -0.45
HSPG2-206ENST00000439717 DNAJC24Q6P3W2 148 aa12.26□□□□□ -0.45
HSPG2-206ENST00000439717 BNIPLQ7Z465 357 aa12.26□□□□□ -0.45
HSPG2-206ENST00000439717 ZNF557Q8N988 423 aaPredicted RBP12.26□□□□□ -0.45
HSPG2-206ENST00000439717 TERB1Q8NA31 727 aa12.26□□□□□ -0.45
HSPG2-206ENST00000439717 PRSS33Q8NF86 280 aa12.26□□□□□ -0.45
HSPG2-206ENST00000439717 EZH1Q92800 747 aaPredicted RBP12.26□□□□□ -0.45
HSPG2-206ENST00000439717 RNF34Q969K3 372 aa12.26□□□□□ -0.45
HSPG2-206ENST00000439717 TRIM11Q96F44 468 aa12.26□□□□□ -0.45
HSPG2-206ENST00000439717 TBCBQ99426 244 aa12.26□□□□□ -0.45
HSPG2-206ENST00000439717 DNAJC7Q99615 494 aa12.26□□□□□ -0.45
HSPG2-206ENST00000439717 ZNHIT6Q9NWK9 470 aaKnown RBP12.26□□□□□ -0.45
HSPG2-206ENST00000439717 TAS2R14Q9NYV8 317 aa12.26□□□□□ -0.45
HSPG2-206ENST00000439717 FBXO4Q9UKT5 387 aa12.26□□□□□ -0.45
HSPG2-206ENST00000439717 SLC27A6Q9Y2P4 619 aa12.26□□□□□ -0.45
HSPG2-206ENST00000439717 SYNJ2BP-COX16A0A087WUM0 186 aa12.25□□□□□ -0.45
HSPG2-206ENST00000439717 TCRBV5S1A1TA0A578 114 aa12.25□□□□□ -0.45
HSPG2-206ENST00000439717 TYW5A2RUC4 315 aaKnown RBP12.25□□□□□ -0.45
HSPG2-206ENST00000439717 TBC1D3BA6NDS4 549 aa12.25□□□□□ -0.45
HSPG2-206ENST00000439717 C2CD4BA6NLJ0 364 aa12.25□□□□□ -0.45
HSPG2-206ENST00000439717 TMCO5BA8MYB1 307 aa12.25□□□□□ -0.45
HSPG2-206ENST00000439717 AP5Z1O43299 807 aa12.25□□□□□ -0.45
HSPG2-206ENST00000439717 TSPAN3O60637 253 aa12.25□□□□□ -0.45
HSPG2-206ENST00000439717 RNF40O75150 1001 aa12.25□□□□□ -0.45
HSPG2-206ENST00000439717 ENDOD1O94919 500 aa12.25□□□□□ -0.45
HSPG2-206ENST00000439717 PAPSS2O95340 614 aaPredicted RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms