RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 HCN2Q9UL51 889 aa18.31■□□□□ 0.52
NUP50-208ENST00000430547 NFE2L3Q9Y4A8 694 aa18.31■□□□□ 0.52
NUP50-208ENST00000430547 CEP83Q9Y592 693 aa18.31■□□□□ 0.52
NUP50-208ENST00000430547 TYW5A2RUC4 315 aaKnown RBP18.3■□□□□ 0.52
NUP50-208ENST00000430547 IGLV3-27P01718 113 aa18.3■□□□□ 0.52
NUP50-208ENST00000430547 ZNF806P0C7X5 589 aa18.3■□□□□ 0.52
NUP50-208ENST00000430547 GABRG2P18507 467 aa18.3■□□□□ 0.52
NUP50-208ENST00000430547 BCKDHBP21953 392 aa18.3■□□□□ 0.52
NUP50-208ENST00000430547 KRT9P35527 623 aa18.3■□□□□ 0.52
NUP50-208ENST00000430547 DHPSP49366 369 aaPredicted RBP18.3■□□□□ 0.52
NUP50-208ENST00000430547 SNX16P57768 344 aa18.3■□□□□ 0.52
NUP50-208ENST00000430547 RAPGEF1Q13905 1077 aa18.3■□□□□ 0.52
NUP50-208ENST00000430547 EIF4HQ15056 248 aaKnown RBP18.3■□□□□ 0.52
NUP50-208ENST00000430547 TCP11X2Q5H9J9 407 aa18.3■□□□□ 0.52
NUP50-208ENST00000430547 MIIPQ5JXC2 388 aa18.3■□□□□ 0.52
NUP50-208ENST00000430547 SASS6Q6UVJ0 657 aa18.3■□□□□ 0.52
NUP50-208ENST00000430547 LPCAT2Q7L5N7 544 aa18.3■□□□□ 0.52
NUP50-208ENST00000430547 TMEM110Q86TL2 294 aa18.3■□□□□ 0.52
NUP50-208ENST00000430547 PASD1Q8IV76 773 aa18.3■□□□□ 0.52
NUP50-208ENST00000430547 GPT2Q8TD30 523 aa18.3■□□□□ 0.52
NUP50-208ENST00000430547 DQX1Q8TE96 717 aaKnown RBP18.3■□□□□ 0.52
NUP50-208ENST00000430547 IPO4Q8TEX9 1081 aaKnown RBP18.3■□□□□ 0.52
NUP50-208ENST00000430547 P2RY11Q96G91 374 aa18.3■□□□□ 0.52
NUP50-208ENST00000430547 PIWIL1Q96J94 861 aaKnown RBP18.3■□□□□ 0.52
NUP50-208ENST00000430547 GABRG3Q99928 467 aa18.3■□□□□ 0.52
NUP50-208ENST00000430547 POPDC2Q9HBU9 364 aa18.3■□□□□ 0.52
NUP50-208ENST00000430547 SIX2Q9NPC8 291 aa18.3■□□□□ 0.52
NUP50-208ENST00000430547 SAMSN1Q9NSI8 373 aaKnown RBP18.3■□□□□ 0.52
NUP50-208ENST00000430547 CYTH4Q9UIA0 394 aa18.3■□□□□ 0.52
NUP50-208ENST00000430547 NAALADL1Q9UQQ1 740 aa18.3■□□□□ 0.52
NUP50-208ENST00000430547 TLR6Q9Y2C9 796 aa18.3■□□□□ 0.52
NUP50-208ENST00000430547 TNRC6BQ9UPQ9 1833 aaKnown RBP18.29■□□□□ 0.52
NUP50-208ENST00000430547 IRAK2O43187 625 aa18.29■□□□□ 0.52
NUP50-208ENST00000430547 PAPSS1O43252 624 aaPredicted RBP18.29■□□□□ 0.52
NUP50-208ENST00000430547 ACSL4O60488 711 aa18.29■□□□□ 0.52
NUP50-208ENST00000430547 HOXD9P28356 352 aaPredicted RBP18.29■□□□□ 0.52
NUP50-208ENST00000430547 BPIFB4P59827 614 aa18.29■□□□□ 0.52
NUP50-208ENST00000430547 YWHAZP63104 245 aaKnown RBP18.29■□□□□ 0.52
NUP50-208ENST00000430547 NNTQ13423 1086 aa18.29■□□□□ 0.52
NUP50-208ENST00000430547 SF3A2Q15428 464 aaKnown RBP18.29■□□□□ 0.52
NUP50-208ENST00000430547 BEND5Q7L4P6 421 aa18.29■□□□□ 0.52
NUP50-208ENST00000430547 CYP2U1Q7Z449 544 aa18.29■□□□□ 0.52
NUP50-208ENST00000430547 ERLEC1Q96DZ1 483 aa18.29■□□□□ 0.52
NUP50-208ENST00000430547 RTKNQ9BST9 563 aa18.29■□□□□ 0.52
NUP50-208ENST00000430547 IRX2Q9BZI1 471 aaPredicted RBP18.29■□□□□ 0.52
NUP50-208ENST00000430547 PDCL3Q9H2J4 239 aa18.29■□□□□ 0.52
NUP50-208ENST00000430547 SYNCQ9H7C4 482 aa18.29■□□□□ 0.52
NUP50-208ENST00000430547 CALCOCO1Q9P1Z2 691 aa18.29■□□□□ 0.52
NUP50-208ENST00000430547 AJAP1Q9UKB5 411 aaPredicted RBP18.29■□□□□ 0.52
NUP50-208ENST00000430547 PCDHGC3Q9UN70 934 aa18.29■□□□□ 0.52
NUP50-208ENST00000430547 RAD54BQ9Y620 910 aa18.29■□□□□ 0.52
NUP50-208ENST00000430547 STON1Q9Y6Q2 735 aa18.29■□□□□ 0.52
NUP50-208ENST00000430547 A0A1W2PQF6 199 aa18.28■□□□□ 0.52
NUP50-208ENST00000430547 BCLAF3A2AJT9 711 aaKnown RBP18.28■□□□□ 0.52
NUP50-208ENST00000430547 FOXN3O00409 490 aaPredicted RBP18.28■□□□□ 0.52
NUP50-208ENST00000430547 CAVIN2O95810 425 aa18.28■□□□□ 0.52
NUP50-208ENST00000430547 MBD3O95983 291 aa18.28■□□□□ 0.52
NUP50-208ENST00000430547 APOEP02649 317 aa18.28■□□□□ 0.52
NUP50-208ENST00000430547 FYNP06241 537 aa18.28■□□□□ 0.52
NUP50-208ENST00000430547 CCDC117Q8IWD4 279 aaPredicted RBP18.28■□□□□ 0.52
NUP50-208ENST00000430547 ZNF557Q8N988 423 aaPredicted RBP18.28■□□□□ 0.52
NUP50-208ENST00000430547 ADAM32Q8TC27 787 aa18.28■□□□□ 0.52
NUP50-208ENST00000430547 ENOX1Q8TC92 643 aaKnown RBP18.28■□□□□ 0.52
NUP50-208ENST00000430547 WFIKKN2Q8TEU8 576 aa18.28■□□□□ 0.52
NUP50-208ENST00000430547 AZIN2Q96A70 460 aa18.28■□□□□ 0.52
NUP50-208ENST00000430547 PPP1R13BQ96KQ4 1090 aa18.28■□□□□ 0.52
NUP50-208ENST00000430547 LSM14BQ9BX40 385 aaKnown RBP18.28■□□□□ 0.52
NUP50-208ENST00000430547 ELOVL2Q9NXB9 296 aa18.28■□□□□ 0.52
NUP50-208ENST00000430547 TAB2Q9NYJ8 693 aa18.28■□□□□ 0.52
NUP50-208ENST00000430547 THAP10Q9P2Z0 257 aaPredicted RBP18.28■□□□□ 0.52
NUP50-208ENST00000430547 CLEC4EQ9ULY5 219 aa18.28■□□□□ 0.52
NUP50-208ENST00000430547 CKAP5Q14008 2032 aa18.28■□□□□ 0.52
NUP50-208ENST00000430547 WASH3PC4AMC7 463 aa18.27■□□□□ 0.52
NUP50-208ENST00000430547 TIMM44O43615 452 aa18.27■□□□□ 0.52
NUP50-208ENST00000430547 SYNCRIPO60506 623 aaKnown RBP18.27■□□□□ 0.52
NUP50-208ENST00000430547 TBL1XO60907 577 aa18.27■□□□□ 0.52
NUP50-208ENST00000430547 ZNF217O75362 1048 aa18.27■□□□□ 0.52
NUP50-208ENST00000430547 MOCS2O96007 188 aaPredicted RBP18.27■□□□□ 0.52
NUP50-208ENST00000430547 PNMA6AP0CW24 399 aaPredicted RBP18.27■□□□□ 0.52
NUP50-208ENST00000430547 NDUFV2P19404 249 aa18.27■□□□□ 0.52
NUP50-208ENST00000430547 ATXN1P54253 815 aaKnown RBP18.27■□□□□ 0.52
NUP50-208ENST00000430547 DRAP1Q14919 205 aaPredicted RBP18.27■□□□□ 0.52
NUP50-208ENST00000430547 MAP7D1Q3KQU3 841 aa18.27■□□□□ 0.52
NUP50-208ENST00000430547 PLA2G2CQ5R387 149 aa18.27■□□□□ 0.52
NUP50-208ENST00000430547 MPP7Q5T2T1 576 aa18.27■□□□□ 0.52
NUP50-208ENST00000430547 SYPL2Q5VXT5 272 aa18.27■□□□□ 0.52
NUP50-208ENST00000430547 KIAA1211LQ6NV74 962 aa18.27■□□□□ 0.52
NUP50-208ENST00000430547 RFWD3Q6PCD5 774 aa18.27■□□□□ 0.52
NUP50-208ENST00000430547 KIAA1324Q6UXG2 1013 aaKnown RBP18.27■□□□□ 0.52
NUP50-208ENST00000430547 SERPINA13PQ6UXR4 307 aa18.27■□□□□ 0.52
NUP50-208ENST00000430547 SLC36A4Q6YBV0 504 aa18.27■□□□□ 0.52
NUP50-208ENST00000430547 RBM43Q6ZSC3 357 aaKnown RBP18.27■□□□□ 0.52
NUP50-208ENST00000430547 TAC4Q86UU9 113 aa18.27■□□□□ 0.52
NUP50-208ENST00000430547 SLC47A2Q86VL8 602 aa18.27■□□□□ 0.52
NUP50-208ENST00000430547 HJURPQ8NCD3 748 aaPredicted RBP18.27■□□□□ 0.52
NUP50-208ENST00000430547 C1orf131Q8NDD1 294 aaKnown RBP18.27■□□□□ 0.52
NUP50-208ENST00000430547 FCRL2Q96LA5 508 aaPredicted RBP18.27■□□□□ 0.52
NUP50-208ENST00000430547 CPXM1Q96SM3 734 aa18.27■□□□□ 0.52
NUP50-208ENST00000430547 LHX5Q9H2C1 402 aa18.27■□□□□ 0.52
NUP50-208ENST00000430547 SMOC1Q9H4F8 434 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms