RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 KRT1P04264 644 aa4.8□□□□□ -1.64
SF3B1-202ENST00000409915 IQCF3P0C7M6 154 aa4.8□□□□□ -1.64
SF3B1-202ENST00000409915 FAM157BP0CG42 384 aa4.8□□□□□ -1.64
SF3B1-202ENST00000409915 GHRP10912 638 aa4.8□□□□□ -1.64
SF3B1-202ENST00000409915 BMP4P12644 408 aa4.8□□□□□ -1.64
SF3B1-202ENST00000409915 ALOX15P16050 662 aaPredicted RBP4.8□□□□□ -1.64
SF3B1-202ENST00000409915 STMN1P16949 149 aa4.8□□□□□ -1.64
SF3B1-202ENST00000409915 DESP17661 470 aa4.8□□□□□ -1.64
SF3B1-202ENST00000409915 ENPP1P22413 925 aa4.8□□□□□ -1.64
SF3B1-202ENST00000409915 CTSSP25774 331 aa4.8□□□□□ -1.64
SF3B1-202ENST00000409915 EEF1GP26641 437 aaKnown RBP4.8□□□□□ -1.64
SF3B1-202ENST00000409915 KLRC1P26715 233 aa4.8□□□□□ -1.64
SF3B1-202ENST00000409915 CDC25AP30304 524 aa4.8□□□□□ -1.64
SF3B1-202ENST00000409915 SFNP31947 248 aa4.8□□□□□ -1.64
SF3B1-202ENST00000409915 IL12RB1P42701 662 aa4.8□□□□□ -1.64
SF3B1-202ENST00000409915 POLD2P49005 469 aa4.8□□□□□ -1.64
SF3B1-202ENST00000409915 SLC16A1P53985 500 aa4.8□□□□□ -1.64
SF3B1-202ENST00000409915 NPEPPSP55786 919 aa4.8□□□□□ -1.64
SF3B1-202ENST00000409915 MRPS35P82673 323 aaKnown RBP4.8□□□□□ -1.64
SF3B1-202ENST00000409915 AMPD2Q01433 879 aa4.8□□□□□ -1.64
SF3B1-202ENST00000409915 GSTM4Q03013 218 aa4.8□□□□□ -1.64
SF3B1-202ENST00000409915 CEBPZQ03701 1054 aaKnown RBP4.8□□□□□ -1.64
SF3B1-202ENST00000409915 GRIN1Q05586 938 aa4.8□□□□□ -1.64
SF3B1-202ENST00000409915 TNP2Q05952 138 aa4.8□□□□□ -1.64
SF3B1-202ENST00000409915 SPEM2Q0P670 501 aa4.8□□□□□ -1.64
SF3B1-202ENST00000409915 PPIGQ13427 754 aaKnown RBP eCLIP4.8□□□□□ -1.645e-11■□□□□ 10.3
SF3B1-202ENST00000409915 DRP2Q13474 957 aa4.8□□□□□ -1.64
SF3B1-202ENST00000409915 AUHQ13825 339 aaKnown RBP4.8□□□□□ -1.64
SF3B1-202ENST00000409915 GPNMBQ14956 572 aa4.8□□□□□ -1.64
SF3B1-202ENST00000409915 SLMAPQ14BN4 828 aa4.8□□□□□ -1.64
SF3B1-202ENST00000409915 RASA2Q15283 850 aa4.8□□□□□ -1.64
SF3B1-202ENST00000409915 IL17AQ16552 155 aa4.8□□□□□ -1.64
SF3B1-202ENST00000409915 HABP4Q5JVS0 413 aaKnown RBP4.8□□□□□ -1.64
SF3B1-202ENST00000409915 CWF19L1Q69YN2 538 aaKnown RBP4.8□□□□□ -1.64
SF3B1-202ENST00000409915 MTHFD1LQ6UB35 978 aa4.8□□□□□ -1.64
SF3B1-202ENST00000409915 ZNF365Q70YC5 407 aa4.8□□□□□ -1.64
SF3B1-202ENST00000409915 ANO5Q75V66 913 aa4.8□□□□□ -1.64
SF3B1-202ENST00000409915 LRRC8DQ7L1W4 858 aa4.8□□□□□ -1.64
SF3B1-202ENST00000409915 OTUD6AQ7L8S5 288 aa4.8□□□□□ -1.64
SF3B1-202ENST00000409915 OTOP2Q7RTS6 562 aa4.8□□□□□ -1.64
SF3B1-202ENST00000409915 KRT74Q7RTS7 529 aa4.8□□□□□ -1.64
SF3B1-202ENST00000409915 TMCO2Q7Z6W1 182 aaPredicted RBP4.8□□□□□ -1.64
SF3B1-202ENST00000409915 SAMD14Q8IZD0 417 aaPredicted RBP4.8□□□□□ -1.64
SF3B1-202ENST00000409915 TDHQ8IZJ6 230 aa4.8□□□□□ -1.64
SF3B1-202ENST00000409915 MYOCDQ8IZQ8 938 aa4.8□□□□□ -1.64
SF3B1-202ENST00000409915 TMEM199Q8N511 208 aa4.8□□□□□ -1.64
SF3B1-202ENST00000409915 METTL13Q8N6R0 699 aa4.8□□□□□ -1.64
SF3B1-202ENST00000409915 C4orf32Q8N8J7 132 aa4.8□□□□□ -1.64
SF3B1-202ENST00000409915 C3orf20Q8ND61 904 aa4.8□□□□□ -1.64
SF3B1-202ENST00000409915 RDM1Q8NG50 284 aa4.8□□□□□ -1.64
SF3B1-202ENST00000409915 FAM81AQ8TBF8 368 aa4.8□□□□□ -1.64
SF3B1-202ENST00000409915 CAGE1Q8TC20 777 aa4.8□□□□□ -1.64
SF3B1-202ENST00000409915 ADAMTS15Q8TE58 950 aa4.8□□□□□ -1.64
SF3B1-202ENST00000409915 DNAJB3Q8WWF6 145 aa4.8□□□□□ -1.64
SF3B1-202ENST00000409915 RUBCNQ92622 972 aa4.8□□□□□ -1.64
SF3B1-202ENST00000409915 FBXW5Q969U6 566 aa4.8□□□□□ -1.64
SF3B1-202ENST00000409915 ZUFSPQ96AP4 578 aa4.8□□□□□ -1.64
SF3B1-202ENST00000409915 SAAL1Q96ER3 474 aa4.8□□□□□ -1.64
SF3B1-202ENST00000409915 BICD1Q96G01 975 aa4.8□□□□□ -1.64
SF3B1-202ENST00000409915 CHAMP1Q96JM3 812 aa4.8□□□□□ -1.64
SF3B1-202ENST00000409915 CNDP2Q96KP4 475 aaKnown RBP4.8□□□□□ -1.64
SF3B1-202ENST00000409915 KCNC2Q96PR1 638 aa4.8□□□□□ -1.64
SF3B1-202ENST00000409915 CORO1BQ9BR76 489 aa4.8□□□□□ -1.64
SF3B1-202ENST00000409915 COLEC11Q9BWP8 271 aa4.8□□□□□ -1.64
SF3B1-202ENST00000409915 IL23AQ9NPF7 189 aa4.8□□□□□ -1.64
SF3B1-202ENST00000409915 GPR27Q9NS67 375 aa4.8□□□□□ -1.64
SF3B1-202ENST00000409915 SLC39A10Q9ULF5 831 aa4.8□□□□□ -1.64
SF3B1-202ENST00000409915 MKL2Q9ULH7 1088 aa4.8□□□□□ -1.64
SF3B1-202ENST00000409915 PCDHA12Q9UN75 941 aa4.8□□□□□ -1.64
SF3B1-202ENST00000409915 EDARQ9UNE0 448 aa4.8□□□□□ -1.64
SF3B1-202ENST00000409915 GINS2Q9Y248 185 aa4.8□□□□□ -1.64
SF3B1-202ENST00000409915 ZDHHC9Q9Y397 364 aa4.8□□□□□ -1.64
SF3B1-202ENST00000409915 CLIC4Q9Y696 253 aa4.8□□□□□ -1.64
SF3B1-202ENST00000409915 CHD9Q3L8U1 2897 aa4.79□□□□□ -1.64
SF3B1-202ENST00000409915 SIP14410 1827 aa4.79□□□□□ -1.64
SF3B1-202ENST00000409915 A0A1W2PPC4 97 aa4.79□□□□□ -1.64
SF3B1-202ENST00000409915 VWA3AA6NCI4 1184 aa4.79□□□□□ -1.64
SF3B1-202ENST00000409915 GRXCR1A8MXD5 290 aa4.79□□□□□ -1.64
SF3B1-202ENST00000409915 RSPH10B2B2RC85 870 aa4.79□□□□□ -1.64
SF3B1-202ENST00000409915 F8W8V4 182 aa4.79□□□□□ -1.64
SF3B1-202ENST00000409915 ATXN7O15265 892 aaPredicted RBP4.79□□□□□ -1.64
SF3B1-202ENST00000409915 MEFVO15553 781 aaPredicted RBP4.79□□□□□ -1.64
SF3B1-202ENST00000409915 SHOX2O60902 331 aaPredicted RBP4.79□□□□□ -1.64
SF3B1-202ENST00000409915 E2F6O75461 281 aa4.79□□□□□ -1.64
SF3B1-202ENST00000409915 SLITRK3O94933 977 aa4.79□□□□□ -1.64
SF3B1-202ENST00000409915 CHRNA1P02708 482 aa4.79□□□□□ -1.64
SF3B1-202ENST00000409915 RSPH10BP0C881 870 aa4.79□□□□□ -1.64
SF3B1-202ENST00000409915 ZSCAN22P10073 491 aaPredicted RBP4.79□□□□□ -1.64
SF3B1-202ENST00000409915 GNAT1P11488 350 aa4.79□□□□□ -1.64
SF3B1-202ENST00000409915 ALAS2P22557 587 aa4.79□□□□□ -1.64
SF3B1-202ENST00000409915 TPP2P29144 1249 aaPredicted RBP4.79□□□□□ -1.64
SF3B1-202ENST00000409915 MARCKSP29966 332 aaPredicted RBP4.79□□□□□ -1.64
SF3B1-202ENST00000409915 YWHABP31946 246 aaKnown RBP4.79□□□□□ -1.64
SF3B1-202ENST00000409915 BMP8BP34820 402 aa4.79□□□□□ -1.64
SF3B1-202ENST00000409915 HOXD13P35453 343 aa4.79□□□□□ -1.64
SF3B1-202ENST00000409915 CCT6AP40227 531 aaKnown RBP4.79□□□□□ -1.64
SF3B1-202ENST00000409915 QARSP47897 775 aaKnown RBP4.79□□□□□ -1.64
SF3B1-202ENST00000409915 SLC26A2P50443 739 aa4.79□□□□□ -1.64
SF3B1-202ENST00000409915 CASP6P55212 293 aa4.79□□□□□ -1.64
SF3B1-202ENST00000409915 UBASH3AP57075 661 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms