RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 IBSPP21815 317 aaPredicted RBP17.38■□□□□ 0.37
NUP50-203ENST00000407019 NOS2P35228 1153 aa17.38■□□□□ 0.37
NUP50-203ENST00000407019 MRPS5P82675 430 aaKnown RBP17.38■□□□□ 0.37
NUP50-203ENST00000407019 CDK16Q00536 496 aa17.38■□□□□ 0.37
NUP50-203ENST00000407019 OTUD1Q5VV17 481 aaPredicted RBP17.38■□□□□ 0.37
NUP50-203ENST00000407019 ARRDC4Q8NCT1 418 aa17.38■□□□□ 0.37
NUP50-203ENST00000407019 SMG8Q8ND04 991 aaKnown RBP17.38■□□□□ 0.37
NUP50-203ENST00000407019 RNF139Q8WU17 664 aa17.38■□□□□ 0.37
NUP50-203ENST00000407019 LGMNQ99538 433 aa17.38■□□□□ 0.37
NUP50-203ENST00000407019 PTPN18Q99952 460 aa17.38■□□□□ 0.37
NUP50-203ENST00000407019 FERMT1Q9BQL6 677 aa17.38■□□□□ 0.37
NUP50-203ENST00000407019 TMEM120AQ9BXJ8 343 aa17.38■□□□□ 0.37
NUP50-203ENST00000407019 EBF2Q9HAK2 575 aa17.38■□□□□ 0.37
NUP50-203ENST00000407019 HEY2Q9UBP5 337 aa17.38■□□□□ 0.37
NUP50-203ENST00000407019 LNPEPQ9UIQ6 1025 aa17.38■□□□□ 0.37
NUP50-203ENST00000407019 STAP1Q9ULZ2 295 aa17.38■□□□□ 0.37
NUP50-203ENST00000407019 NR2E3Q9Y5X4 410 aa17.38■□□□□ 0.37
NUP50-203ENST00000407019 CLDN5O00501 218 aa17.37■□□□□ 0.37
NUP50-203ENST00000407019 HAUS5O94927 633 aa17.37■□□□□ 0.37
NUP50-203ENST00000407019 MYL3P08590 195 aa17.37■□□□□ 0.37
NUP50-203ENST00000407019 LRPAP1P30533 357 aa17.37■□□□□ 0.37
NUP50-203ENST00000407019 CTC1Q2NKJ3 1217 aa17.37■□□□□ 0.37
NUP50-203ENST00000407019 SPRYD7Q5W111 196 aa17.37■□□□□ 0.37
NUP50-203ENST00000407019 STEAP4Q687X5 459 aa17.37■□□□□ 0.37
NUP50-203ENST00000407019 COLGALT1Q8NBJ5 622 aa17.37■□□□□ 0.37
NUP50-203ENST00000407019 KCTD13Q8WZ19 329 aa17.37■□□□□ 0.37
NUP50-203ENST00000407019 NPY6RQ99463 290 aa17.37■□□□□ 0.37
NUP50-203ENST00000407019 TBC1D10AQ9BXI6 508 aa17.37■□□□□ 0.37
NUP50-203ENST00000407019 SLC13A1Q9BZW2 595 aa17.37■□□□□ 0.37
NUP50-203ENST00000407019 KCNK13Q9HB14 408 aa17.37■□□□□ 0.37
NUP50-203ENST00000407019 LRRC4Q9HBW1 653 aa17.37■□□□□ 0.37
NUP50-203ENST00000407019 EIF2B3Q9NR50 452 aaKnown RBP17.37■□□□□ 0.37
NUP50-203ENST00000407019 NOP53Q9NZM5 478 aaKnown RBP17.37■□□□□ 0.37
NUP50-203ENST00000407019 NUMBLQ9Y6R0 609 aa17.37■□□□□ 0.37
NUP50-203ENST00000407019 SF3B1O75533 1304 aaKnown RBP eCLIP17.37■□□□□ 0.372e-7■■■■■ 41.4
NUP50-203ENST00000407019 I3L4J1 428 aa17.36■□□□□ 0.37
NUP50-203ENST00000407019 RNF103O00237 685 aa17.36■□□□□ 0.37
NUP50-203ENST00000407019 CYB561D2O14569 222 aa17.36■□□□□ 0.37
NUP50-203ENST00000407019 OPHN1O60890 802 aa17.36■□□□□ 0.37
NUP50-203ENST00000407019 DLDP09622 509 aaKnown RBP17.36■□□□□ 0.37
NUP50-203ENST00000407019 ZNF865P0CJ78 1059 aaPredicted RBP17.36■□□□□ 0.37
NUP50-203ENST00000407019 PTPN1P18031 435 aaKnown RBP17.36■□□□□ 0.37
NUP50-203ENST00000407019 ACAT1P24752 427 aaKnown RBP17.36■□□□□ 0.37
NUP50-203ENST00000407019 PTPN4P29074 926 aa17.36■□□□□ 0.37
NUP50-203ENST00000407019 MAP2K2P36507 400 aa17.36■□□□□ 0.37
NUP50-203ENST00000407019 CPT1AP50416 773 aa17.36■□□□□ 0.37
NUP50-203ENST00000407019 PITX1P78337 314 aaPredicted RBP17.36■□□□□ 0.37
NUP50-203ENST00000407019 MAP2K5Q13163 448 aa17.36■□□□□ 0.37
NUP50-203ENST00000407019 MORN1Q5T089 497 aa17.36■□□□□ 0.37
NUP50-203ENST00000407019 CYS1Q717R9 158 aa17.36■□□□□ 0.37
NUP50-203ENST00000407019 LONP2Q86WA8 852 aa17.36■□□□□ 0.37
NUP50-203ENST00000407019 SIX6OS1Q8N1H7 587 aa17.36■□□□□ 0.37
NUP50-203ENST00000407019 ARMC2Q8NEN0 867 aa17.36■□□□□ 0.37
NUP50-203ENST00000407019 NT5C3BQ969T7 300 aa17.36■□□□□ 0.37
NUP50-203ENST00000407019 SKA1Q96BD8 255 aa17.36■□□□□ 0.37
NUP50-203ENST00000407019 PCMTD2Q9NV79 361 aa17.36■□□□□ 0.37
NUP50-203ENST00000407019 MOCS1Q9NZB8 636 aa17.36■□□□□ 0.37
NUP50-203ENST00000407019 SYNJ2BP-COX16A0A087WUM0 186 aa17.36■□□□□ 0.37
NUP50-203ENST00000407019 C17orf102A2RUQ5 167 aa17.36■□□□□ 0.37
NUP50-203ENST00000407019 F5H423 210 aaPredicted RBP17.36■□□□□ 0.37
NUP50-203ENST00000407019 M0QYT0 321 aa17.36■□□□□ 0.37
NUP50-203ENST00000407019 DNAJC6O75061 913 aa17.36■□□□□ 0.37
NUP50-203ENST00000407019 CNTFP26441 200 aa17.36■□□□□ 0.37
NUP50-203ENST00000407019 FKBP1BP68106 108 aa17.36■□□□□ 0.37
NUP50-203ENST00000407019 AP1B1Q10567 949 aa17.36■□□□□ 0.37
NUP50-203ENST00000407019 PDK1Q15118 436 aa17.36■□□□□ 0.37
NUP50-203ENST00000407019 MROH9Q5TGP6 573 aa17.36■□□□□ 0.37
NUP50-203ENST00000407019 ATG16L1Q676U5 607 aa17.36■□□□□ 0.37
NUP50-203ENST00000407019 TWF2Q6IBS0 349 aaKnown RBP17.36■□□□□ 0.37
NUP50-203ENST00000407019 LRRC8BQ6P9F7 803 aa17.36■□□□□ 0.37
NUP50-203ENST00000407019 BNIPLQ7Z465 357 aa17.36■□□□□ 0.37
NUP50-203ENST00000407019 OXNAD1Q96HP4 312 aaPredicted RBP17.36■□□□□ 0.37
NUP50-203ENST00000407019 SLC2A13Q96QE2 648 aa17.36■□□□□ 0.37
NUP50-203ENST00000407019 MED10Q9BTT4 135 aa17.36■□□□□ 0.37
NUP50-203ENST00000407019 TUBB6Q9BUF5 446 aa17.36■□□□□ 0.37
NUP50-203ENST00000407019 FLRT1Q9NZU1 646 aa17.36■□□□□ 0.37
NUP50-203ENST00000407019 COX16Q9P0S2 106 aa17.36■□□□□ 0.37
NUP50-203ENST00000407019 WDR27A2RRH5 827 aa17.35■□□□□ 0.37
NUP50-203ENST00000407019 BEST1O76090 585 aa17.35■□□□□ 0.37
NUP50-203ENST00000407019 ANP32DO95626 131 aa17.35■□□□□ 0.37
NUP50-203ENST00000407019 FAM163BP0C2L3 166 aa17.35■□□□□ 0.37
NUP50-203ENST00000407019 GLUD2P49448 558 aa17.35■□□□□ 0.37
NUP50-203ENST00000407019 ZBTB16Q05516 673 aa17.35■□□□□ 0.37
NUP50-203ENST00000407019 WSCD1Q658N2 575 aa17.35■□□□□ 0.37
NUP50-203ENST00000407019 CASC4Q6P4E1 433 aa17.35■□□□□ 0.37
NUP50-203ENST00000407019 TIFABQ6ZNK6 161 aa17.35■□□□□ 0.37
NUP50-203ENST00000407019 CLEC20AQ6ZU45 233 aa17.35■□□□□ 0.37
NUP50-203ENST00000407019 PAQR9Q6ZVX9 377 aa17.35■□□□□ 0.37
NUP50-203ENST00000407019 MARK2Q7KZI7 788 aaKnown RBP17.35■□□□□ 0.37
NUP50-203ENST00000407019 NDUFAF2Q8N183 169 aa17.35■□□□□ 0.37
NUP50-203ENST00000407019 PDCD7Q8N8D1 485 aaKnown RBP17.35■□□□□ 0.37
NUP50-203ENST00000407019 E2F7Q96AV8 911 aa17.35■□□□□ 0.37
NUP50-203ENST00000407019 P2RY11Q96G91 374 aa17.35■□□□□ 0.37
NUP50-203ENST00000407019 C7orf26Q96N11 449 aa17.35■□□□□ 0.37
NUP50-203ENST00000407019 MECRQ9BV79 373 aa17.35■□□□□ 0.37
NUP50-203ENST00000407019 TMPRSS4Q9NRS4 437 aa17.35■□□□□ 0.37
NUP50-203ENST00000407019 CPA4Q9UI42 421 aa17.35■□□□□ 0.37
NUP50-203ENST00000407019 HMX2A2RU54 273 aa17.35■□□□□ 0.37
NUP50-203ENST00000407019 SDR42E2A6NKP2 422 aa17.35■□□□□ 0.37
NUP50-203ENST00000407019 PTGESO14684 152 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms