RNA–Protein interactions for RNA: ENST00000405692.2

PDGFA-204, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 5

Gene PDGFA, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-204ENST00000405692 RNF34Q969K3 372 aa21.64■■□□□ 1.05
PDGFA-204ENST00000405692 TMA16Q96EY4 203 aaKnown RBP21.64■■□□□ 1.05
PDGFA-204ENST00000405692 SLC2A11Q9BYW1 496 aa21.64■■□□□ 1.05
PDGFA-204ENST00000405692 TTYH3Q9C0H2 523 aa21.64■■□□□ 1.05
PDGFA-204ENST00000405692 DDIT4Q9NX09 232 aa21.64■■□□□ 1.05
PDGFA-204ENST00000405692 AIPL1Q9NZN9 384 aa21.64■■□□□ 1.05
PDGFA-204ENST00000405692 SLC8A2Q9UPR5 921 aa21.64■■□□□ 1.05
PDGFA-204ENST00000405692 CALB1P05937 261 aa21.63■■□□□ 1.05
PDGFA-204ENST00000405692 UNGP13051 313 aaPredicted RBP21.63■■□□□ 1.05
PDGFA-204ENST00000405692 ABCB4P21439 1286 aa21.63■■□□□ 1.05
PDGFA-204ENST00000405692 TNFAIP3P21580 790 aa21.63■■□□□ 1.05
PDGFA-204ENST00000405692 CCR1P32246 355 aa21.63■■□□□ 1.05
PDGFA-204ENST00000405692 PBX1P40424 430 aa21.63■■□□□ 1.05
PDGFA-204ENST00000405692 RNASE9P60153 205 aaKnown RBP21.63■■□□□ 1.05
PDGFA-204ENST00000405692 E2F5Q15329 346 aa21.63■■□□□ 1.05
PDGFA-204ENST00000405692 MMS22LQ6ZRQ5 1243 aa21.63■■□□□ 1.05
PDGFA-204ENST00000405692 SND1Q7KZF4 910 aaKnown RBP eCLIP21.63■■□□□ 1.05
PDGFA-204ENST00000405692 ARCQ7LC44 396 aa21.63■■□□□ 1.05
PDGFA-204ENST00000405692 ZNF557Q8N988 423 aaPredicted RBP21.63■■□□□ 1.05
PDGFA-204ENST00000405692 EZH1Q92800 747 aaPredicted RBP21.63■■□□□ 1.05
PDGFA-204ENST00000405692 BTN2A3PQ96KV6 586 aa21.63■■□□□ 1.05
PDGFA-204ENST00000405692 PLK2Q9NYY3 685 aa21.63■■□□□ 1.05
PDGFA-204ENST00000405692 FBXO10Q9UK96 956 aa21.63■■□□□ 1.05
PDGFA-204ENST00000405692 PAXBP1Q9Y5B6 917 aa21.63■■□□□ 1.05
PDGFA-204ENST00000405692 GOLGA8SH3BPF8 625 aa21.62■■□□□ 1.05
PDGFA-204ENST00000405692 F9P00740 461 aa21.62■■□□□ 1.05
PDGFA-204ENST00000405692 PLA2G5P39877 138 aa21.62■■□□□ 1.05
PDGFA-204ENST00000405692 SATB1Q01826 763 aa21.62■■□□□ 1.05
PDGFA-204ENST00000405692 MPP7Q5T2T1 576 aa21.62■■□□□ 1.05
PDGFA-204ENST00000405692 TRMT11Q7Z4G4 463 aaKnown RBP21.62■■□□□ 1.05
PDGFA-204ENST00000405692 PHF13Q86YI8 300 aaPredicted RBP21.62■■□□□ 1.05
PDGFA-204ENST00000405692 PHTF2Q8N3S3 785 aa21.62■■□□□ 1.05
PDGFA-204ENST00000405692 SLC30A5Q8TAD4 765 aa21.62■■□□□ 1.05
PDGFA-204ENST00000405692 USP33Q8TEY7 942 aa21.62■■□□□ 1.05
PDGFA-204ENST00000405692 PCDHB18PQ96TA0 734 aa21.62■■□□□ 1.05
PDGFA-204ENST00000405692 C11orf70Q9BRQ4 267 aa21.62■■□□□ 1.05
PDGFA-204ENST00000405692 ADAM22Q9P0K1 906 aa21.62■■□□□ 1.05
PDGFA-204ENST00000405692 SLC27A6Q9Y2P4 619 aa21.62■■□□□ 1.05
PDGFA-204ENST00000405692 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.62■■□□□ 1.05
PDGFA-204ENST00000405692 M0QYT0 321 aa21.61■■□□□ 1.05
PDGFA-204ENST00000405692 TSPAN3O60637 253 aa21.61■■□□□ 1.05
PDGFA-204ENST00000405692 MOCS2O96007 188 aaPredicted RBP21.61■■□□□ 1.05
PDGFA-204ENST00000405692 PRKCIP41743 596 aa21.61■■□□□ 1.05
PDGFA-204ENST00000405692 SEC13P55735 322 aa21.61■■□□□ 1.05
PDGFA-204ENST00000405692 KLHL30Q0D2K2 578 aa21.61■■□□□ 1.05
PDGFA-204ENST00000405692 EIF4EBP2Q13542 120 aaPredicted RBP21.61■■□□□ 1.05
PDGFA-204ENST00000405692 C2orf27AQ580R0 203 aa21.61■■□□□ 1.05
PDGFA-204ENST00000405692 ZC3H12AQ5D1E8 599 aaKnown RBP21.61■■□□□ 1.05
PDGFA-204ENST00000405692 C10orf76Q5T2E6 689 aa21.61■■□□□ 1.05
PDGFA-204ENST00000405692 SYT13Q7L8C5 426 aa21.61■■□□□ 1.05
PDGFA-204ENST00000405692 RNF214Q8ND24 703 aa21.61■■□□□ 1.05
PDGFA-204ENST00000405692 ATRIPQ8WXE1 791 aa21.61■■□□□ 1.05
PDGFA-204ENST00000405692 XPO4Q9C0E2 1151 aaKnown RBP21.61■■□□□ 1.05
PDGFA-204ENST00000405692 SEMA4AQ9H3S1 761 aa21.61■■□□□ 1.05
PDGFA-204ENST00000405692 ZSCAN32Q9NX65 697 aa21.61■■□□□ 1.05
PDGFA-204ENST00000405692 PCDHGA2Q9Y5H1 932 aa21.61■■□□□ 1.05
PDGFA-204ENST00000405692 BZW2Q9Y6E2 419 aaKnown RBP21.61■■□□□ 1.05
PDGFA-204ENST00000405692 ITIH6Q6UXX5 1313 aa21.6■■□□□ 1.05
PDGFA-204ENST00000405692 SYNJ2BP-COX16A0A087WUM0 186 aa21.6■■□□□ 1.05
PDGFA-204ENST00000405692 CISD3P0C7P0 127 aa21.6■■□□□ 1.05
PDGFA-204ENST00000405692 HOXA6P31267 233 aa21.6■■□□□ 1.05
PDGFA-204ENST00000405692 NBL1P41271 181 aa21.6■■□□□ 1.05
PDGFA-204ENST00000405692 SULT1E1P49888 294 aa21.6■■□□□ 1.05
PDGFA-204ENST00000405692 GSCP56915 257 aaPredicted RBP21.6■■□□□ 1.05
PDGFA-204ENST00000405692 ZBED6P86452 979 aa21.6■■□□□ 1.05
PDGFA-204ENST00000405692 C1QBPQ07021 282 aaKnown RBP21.6■■□□□ 1.05
PDGFA-204ENST00000405692 NME3Q13232 169 aa21.6■■□□□ 1.05
PDGFA-204ENST00000405692 SLC25A52Q3SY17 297 aa21.6■■□□□ 1.05
PDGFA-204ENST00000405692 C2CD6Q53TS8 623 aa21.6■■□□□ 1.05
PDGFA-204ENST00000405692 FAM133BQ5BKY9 247 aaKnown RBP21.6■■□□□ 1.05
PDGFA-204ENST00000405692 PIK3R6Q5UE93 754 aa21.6■■□□□ 1.05
PDGFA-204ENST00000405692 CCDC117Q8IWD4 279 aaPredicted RBP21.6■■□□□ 1.05
PDGFA-204ENST00000405692 CAMKK1Q8N5S9 505 aa21.6■■□□□ 1.05
PDGFA-204ENST00000405692 HJURPQ8NCD3 748 aaPredicted RBP21.6■■□□□ 1.05
PDGFA-204ENST00000405692 SYN2Q92777 582 aaPredicted RBP21.6■■□□□ 1.05
PDGFA-204ENST00000405692 PGAP3Q96FM1 320 aaPredicted RBP21.6■■□□□ 1.05
PDGFA-204ENST00000405692 NPY6RQ99463 290 aa21.6■■□□□ 1.05
PDGFA-204ENST00000405692 FAM86C1Q9NVL1 165 aa21.6■■□□□ 1.05
PDGFA-204ENST00000405692 COX16Q9P0S2 106 aa21.6■■□□□ 1.05
PDGFA-204ENST00000405692 TMEM59LQ9UK28 342 aa21.6■■□□□ 1.05
PDGFA-204ENST00000405692 CAPN11Q9UMQ6 739 aa21.6■■□□□ 1.05
PDGFA-204ENST00000405692 LUC7L2Q9Y383 392 aaKnown RBP21.6■■□□□ 1.05
PDGFA-204ENST00000405692 STARD13Q9Y3M8 1113 aa21.6■■□□□ 1.05
PDGFA-204ENST00000405692 KCNU1A8MYU2 1149 aa21.59■■□□□ 1.05
PDGFA-204ENST00000405692 GFRA2O00451 464 aa21.59■■□□□ 1.05
PDGFA-204ENST00000405692 TIE1P35590 1138 aa21.59■■□□□ 1.05
PDGFA-204ENST00000405692 PITX1P78337 314 aaPredicted RBP21.59■■□□□ 1.05
PDGFA-204ENST00000405692 EOGTQ5NDL2 527 aa21.59■■□□□ 1.05
PDGFA-204ENST00000405692 BRMS1LQ5PSV4 323 aa21.59■■□□□ 1.05
PDGFA-204ENST00000405692 ACAD10Q6JQN1 1059 aa21.59■■□□□ 1.05
PDGFA-204ENST00000405692 PKN3Q6P5Z2 889 aa21.59■■□□□ 1.05
PDGFA-204ENST00000405692 TSSK4Q6SA08 328 aa21.59■■□□□ 1.05
PDGFA-204ENST00000405692 ANKS1BQ7Z6G8 1248 aa21.59■■□□□ 1.05
PDGFA-204ENST00000405692 UCMAQ8WVF2 138 aa21.59■■□□□ 1.05
PDGFA-204ENST00000405692 NELL1Q92832 810 aa21.59■■□□□ 1.05
PDGFA-204ENST00000405692 NT5C3BQ969T7 300 aa21.59■■□□□ 1.05
PDGFA-204ENST00000405692 HAUS4Q9H6D7 363 aa21.59■■□□□ 1.05
PDGFA-204ENST00000405692 METTL5Q9NRN9 209 aaKnown RBP21.59■■□□□ 1.05
PDGFA-204ENST00000405692 MMP17Q9ULZ9 603 aa21.59■■□□□ 1.05
PDGFA-204ENST00000405692 MUC6Q6W4X9 2439 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms