RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 CAMK2DQ13557 499 aa5.29□□□□□ -1.56
GABPB1-204ENST00000396464 IRF3Q14653 427 aa5.29□□□□□ -1.56
GABPB1-204ENST00000396464 RPS6KA2Q15349 733 aa5.29□□□□□ -1.56
GABPB1-204ENST00000396464 NFIL3Q16649 462 aa5.29□□□□□ -1.56
GABPB1-204ENST00000396464 KBTBD12Q3ZCT8 623 aa5.29□□□□□ -1.56
GABPB1-204ENST00000396464 HSP90AB3PQ58FF7 597 aa5.29□□□□□ -1.56
GABPB1-204ENST00000396464 MPP7Q5T2T1 576 aa5.29□□□□□ -1.56
GABPB1-204ENST00000396464 ADGRA1Q86SQ6 560 aa5.29□□□□□ -1.56
GABPB1-204ENST00000396464 CIR1Q86X95 450 aaPredicted RBP5.29□□□□□ -1.56
GABPB1-204ENST00000396464 GLB1L2Q8IW92 636 aa5.29□□□□□ -1.56
GABPB1-204ENST00000396464 YAF2Q8IY57 180 aa5.29□□□□□ -1.56
GABPB1-204ENST00000396464 POMGNT2Q8NAT1 580 aa5.29□□□□□ -1.56
GABPB1-204ENST00000396464 POGLUT1Q8NBL1 392 aa5.29□□□□□ -1.56
GABPB1-204ENST00000396464 PCSK9Q8NBP7 692 aaKnown RBP5.29□□□□□ -1.56
GABPB1-204ENST00000396464 ANKRD20A12PQ8NF67 263 aa5.29□□□□□ -1.56
GABPB1-204ENST00000396464 FIBINQ8TAL6 211 aa5.29□□□□□ -1.56
GABPB1-204ENST00000396464 BRSK1Q8TDC3 778 aa5.29□□□□□ -1.56
GABPB1-204ENST00000396464 VPS39Q96JC1 886 aa5.29□□□□□ -1.56
GABPB1-204ENST00000396464 CNDP1Q96KN2 507 aa5.29□□□□□ -1.56
GABPB1-204ENST00000396464 LBHD1Q9BQE6 289 aaPredicted RBP5.29□□□□□ -1.56
GABPB1-204ENST00000396464 SPXQ9BT56 116 aa5.29□□□□□ -1.56
GABPB1-204ENST00000396464 KRTAP3-1Q9BYR8 98 aa5.29□□□□□ -1.56
GABPB1-204ENST00000396464 NELFAQ9H3P2 528 aa5.29□□□□□ -1.56
GABPB1-204ENST00000396464 MANSC1Q9H8J5 431 aa5.29□□□□□ -1.56
GABPB1-204ENST00000396464 A1CFQ9NQ94 594 aaKnown RBP5.29□□□□□ -1.56
GABPB1-204ENST00000396464 CGNQ9P2M7 1197 aaKnown RBP5.29□□□□□ -1.56
GABPB1-204ENST00000396464 WASF3Q9UPY6 502 aa5.29□□□□□ -1.56
GABPB1-204ENST00000396464 TSC22D4Q9Y3Q8 395 aa5.29□□□□□ -1.56
GABPB1-204ENST00000396464 PCDHB4Q9Y5E5 795 aa5.29□□□□□ -1.56
GABPB1-204ENST00000396464 POMT1Q9Y6A1 747 aa5.29□□□□□ -1.56
GABPB1-204ENST00000396464 KDM3AQ9Y4C1 1321 aa5.29□□□□□ -1.56
GABPB1-204ENST00000396464 C2orf81A6NN90 581 aa5.28□□□□□ -1.56
GABPB1-204ENST00000396464 B4GALT3O60512 393 aa5.28□□□□□ -1.56
GABPB1-204ENST00000396464 SMPD2O60906 423 aa5.28□□□□□ -1.56
GABPB1-204ENST00000396464 PHF2O75151 1096 aa5.28□□□□□ -1.56
GABPB1-204ENST00000396464 OLFM2O95897 454 aa5.28□□□□□ -1.56
GABPB1-204ENST00000396464 TFRCP02786 760 aaKnown RBP5.28□□□□□ -1.56
GABPB1-204ENST00000396464 MST1P26927 711 aa5.28□□□□□ -1.56
GABPB1-204ENST00000396464 SERPINA4P29622 427 aa5.28□□□□□ -1.56
GABPB1-204ENST00000396464 BSGP35613 385 aa5.28□□□□□ -1.56
GABPB1-204ENST00000396464 PPARGP37231 505 aaPredicted RBP5.28□□□□□ -1.56
GABPB1-204ENST00000396464 MTHFRP42898 656 aa5.28□□□□□ -1.56
GABPB1-204ENST00000396464 TRPC1P48995 793 aa5.28□□□□□ -1.56
GABPB1-204ENST00000396464 AMPHP49418 695 aa5.28□□□□□ -1.56
GABPB1-204ENST00000396464 RBM5P52756 815 aaKnown RBP eCLIP5.28□□□□□ -1.56
GABPB1-204ENST00000396464 ARFIP1P53367 373 aa5.28□□□□□ -1.56
GABPB1-204ENST00000396464 STARD6P59095 220 aa5.28□□□□□ -1.56
GABPB1-204ENST00000396464 MRPS5P82675 430 aaKnown RBP5.28□□□□□ -1.56
GABPB1-204ENST00000396464 CBX3Q13185 183 aa5.28□□□□□ -1.56
GABPB1-204ENST00000396464 PDCLQ13371 301 aa5.28□□□□□ -1.56
GABPB1-204ENST00000396464 NOLC1Q14978 699 aaKnown RBP eCLIP5.28□□□□□ -1.56
GABPB1-204ENST00000396464 RABEP1Q15276 862 aa5.28□□□□□ -1.56
GABPB1-204ENST00000396464 MED22Q15528 200 aa5.28□□□□□ -1.56
GABPB1-204ENST00000396464 SMU1Q2TAY7 513 aa5.28□□□□□ -1.56
GABPB1-204ENST00000396464 MAJINQ3KP22 176 aa5.28□□□□□ -1.56
GABPB1-204ENST00000396464 TRIM60Q495X7 471 aa5.28□□□□□ -1.56
GABPB1-204ENST00000396464 GALNTL6Q49A17 601 aa5.28□□□□□ -1.56
GABPB1-204ENST00000396464 ZNF628Q5EBL2 1059 aa5.28□□□□□ -1.56
GABPB1-204ENST00000396464 PRR31Q5SQ13 230 aa5.28□□□□□ -1.56
GABPB1-204ENST00000396464 STEAP3Q658P3 488 aa5.28□□□□□ -1.56
GABPB1-204ENST00000396464 SPRED1Q7Z699 444 aa5.28□□□□□ -1.56
GABPB1-204ENST00000396464 KRT73Q86Y46 540 aa5.28□□□□□ -1.56
GABPB1-204ENST00000396464 ZGPATQ8N5A5 531 aaKnown RBP5.28□□□□□ -1.56
GABPB1-204ENST00000396464 DPP10Q8N608 796 aa5.28□□□□□ -1.56
GABPB1-204ENST00000396464 CCHCR1Q8TD31 782 aa5.28□□□□□ -1.56
GABPB1-204ENST00000396464 SHC3Q92529 594 aa5.28□□□□□ -1.56
GABPB1-204ENST00000396464 ARHGEF2Q92974 986 aaKnown RBP5.28□□□□□ -1.56
GABPB1-204ENST00000396464 FAM162AQ96A26 154 aa5.28□□□□□ -1.56
GABPB1-204ENST00000396464 FER1L6-AS2Q96M78 137 aa5.28□□□□□ -1.56
GABPB1-204ENST00000396464 SORCS2Q96PQ0 1159 aa5.28□□□□□ -1.56
GABPB1-204ENST00000396464 WDR24Q96S15 920 aa5.28□□□□□ -1.56
GABPB1-204ENST00000396464 PITHD1Q9GZP4 211 aaPredicted RBP5.28□□□□□ -1.56
GABPB1-204ENST00000396464 ST6GALNAC4Q9H4F1 302 aa5.28□□□□□ -1.56
GABPB1-204ENST00000396464 SMARCAD1Q9H4L7 1026 aa5.28□□□□□ -1.56
GABPB1-204ENST00000396464 VEZTQ9HBM0 779 aa5.28□□□□□ -1.56
GABPB1-204ENST00000396464 BARX1Q9HBU1 254 aaPredicted RBP5.28□□□□□ -1.56
GABPB1-204ENST00000396464 NRIP3Q9NQ35 241 aa5.28□□□□□ -1.56
GABPB1-204ENST00000396464 DTLQ9NZJ0 730 aa5.28□□□□□ -1.56
GABPB1-204ENST00000396464 ACTR3BQ9P1U1 418 aa5.28□□□□□ -1.56
GABPB1-204ENST00000396464 RGS17Q9UGC6 210 aaPredicted RBP5.28□□□□□ -1.56
GABPB1-204ENST00000396464 CNOT7Q9UIV1 285 aaKnown RBP5.28□□□□□ -1.56
GABPB1-204ENST00000396464 HOOK1Q9UJC3 728 aaKnown RBP5.28□□□□□ -1.56
GABPB1-204ENST00000396464 CA14Q9ULX7 337 aa5.28□□□□□ -1.56
GABPB1-204ENST00000396464 HPCAL4Q9UM19 191 aa5.28□□□□□ -1.56
GABPB1-204ENST00000396464 KLHL20Q9Y2M5 609 aa5.28□□□□□ -1.56
GABPB1-204ENST00000396464 A0A0B4J203 849 aa5.27□□□□□ -1.57
GABPB1-204ENST00000396464 TRAV34A0A0B4J273 112 aa5.27□□□□□ -1.57
GABPB1-204ENST00000396464 CCDC151A5D8V7 595 aa5.27□□□□□ -1.57
GABPB1-204ENST00000396464 FAM90A20PA6NIJ5 464 aa5.27□□□□□ -1.57
GABPB1-204ENST00000396464 TNFSF14O43557 240 aa5.27□□□□□ -1.57
GABPB1-204ENST00000396464 KIF5CO60282 957 aa5.27□□□□□ -1.57
GABPB1-204ENST00000396464 PDE8BO95263 885 aa5.27□□□□□ -1.57
GABPB1-204ENST00000396464 C22orf31O95567 290 aa5.27□□□□□ -1.57
GABPB1-204ENST00000396464 NTSR2O95665 410 aa5.27□□□□□ -1.57
GABPB1-204ENST00000396464 ANXA6P08133 673 aa5.27□□□□□ -1.57
GABPB1-204ENST00000396464 SPARCP09486 303 aa5.27□□□□□ -1.57
GABPB1-204ENST00000396464 MYBL1P10243 752 aa5.27□□□□□ -1.57
GABPB1-204ENST00000396464 TNNT1P13805 278 aa5.27□□□□□ -1.57
GABPB1-204ENST00000396464 ZNF28P17035 718 aa5.27□□□□□ -1.57
GABPB1-204ENST00000396464 BTF3P20290 206 aaKnown RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms