RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 SNX13Q9Y5W8 968 aa9.36□□□□□ -0.91
SMARCA1-202ENST00000371122 SNED1Q8TER0 1413 aa9.35□□□□□ -0.91
SMARCA1-202ENST00000371122 ARAP2Q8WZ64 1704 aa9.35□□□□□ -0.91
SMARCA1-202ENST00000371122 MYO1GB0I1T2 1018 aa9.35□□□□□ -0.91
SMARCA1-202ENST00000371122 H0Y626 953 aa9.35□□□□□ -0.91
SMARCA1-202ENST00000371122 CCL22O00626 93 aa9.35□□□□□ -0.91
SMARCA1-202ENST00000371122 SNX3O60493 162 aa9.35□□□□□ -0.91
SMARCA1-202ENST00000371122 KATNA1O75449 491 aa9.35□□□□□ -0.91
SMARCA1-202ENST00000371122 LYPLA1O75608 230 aaPredicted RBP9.35□□□□□ -0.91
SMARCA1-202ENST00000371122 TRIM16O95361 564 aa9.35□□□□□ -0.91
SMARCA1-202ENST00000371122 ATP6V1G2O95670 118 aa9.35□□□□□ -0.91
SMARCA1-202ENST00000371122 GUCA1CO95843 209 aa9.35□□□□□ -0.91
SMARCA1-202ENST00000371122 LMNAP02545 664 aaKnown RBP9.35□□□□□ -0.91
SMARCA1-202ENST00000371122 CKMP06732 381 aa9.35□□□□□ -0.91
SMARCA1-202ENST00000371122 MCF2P10911 925 aa9.35□□□□□ -0.91
SMARCA1-202ENST00000371122 SLC25A3Q00325 362 aa9.35□□□□□ -0.91
SMARCA1-202ENST00000371122 TXNRD3NBQ6F5E7 133 aa9.35□□□□□ -0.91
SMARCA1-202ENST00000371122 NAPEPLDQ6IQ20 393 aa9.35□□□□□ -0.91
SMARCA1-202ENST00000371122 DDX53Q86TM3 631 aaKnown RBP9.35□□□□□ -0.91
SMARCA1-202ENST00000371122 TMEM130Q8N3G9 435 aa9.35□□□□□ -0.91
SMARCA1-202ENST00000371122 C3orf20Q8ND61 904 aa9.35□□□□□ -0.91
SMARCA1-202ENST00000371122 SH3KBP1Q96B97 665 aa9.35□□□□□ -0.91
SMARCA1-202ENST00000371122 GCNAQ96QF7 691 aa9.35□□□□□ -0.91
SMARCA1-202ENST00000371122 TKTL2Q9H0I9 626 aa9.35□□□□□ -0.91
SMARCA1-202ENST00000371122 RERGLQ9H628 205 aa9.35□□□□□ -0.91
SMARCA1-202ENST00000371122 ZNF711Q9Y462 761 aa9.35□□□□□ -0.91
SMARCA1-202ENST00000371122 ORC6Q9Y5N6 252 aa9.35□□□□□ -0.91
SMARCA1-202ENST00000371122 CITO14578 2027 aa9.35□□□□□ -0.91
SMARCA1-202ENST00000371122 A0A096LPK6 155 aa9.35□□□□□ -0.91
SMARCA1-202ENST00000371122 SYCE1LA8MT33 242 aa9.35□□□□□ -0.91
SMARCA1-202ENST00000371122 SERPINB9P50453 376 aa9.35□□□□□ -0.91
SMARCA1-202ENST00000371122 TGFB2P61812 414 aa9.35□□□□□ -0.91
SMARCA1-202ENST00000371122 GBE1Q04446 702 aa9.35□□□□□ -0.91
SMARCA1-202ENST00000371122 BST2Q10589 180 aaKnown RBP9.35□□□□□ -0.91
SMARCA1-202ENST00000371122 VEPH1Q14D04 833 aa9.35□□□□□ -0.91
SMARCA1-202ENST00000371122 CTXN3Q4LDR2 81 aa9.35□□□□□ -0.91
SMARCA1-202ENST00000371122 ZNF470Q6ECI4 717 aa9.35□□□□□ -0.91
SMARCA1-202ENST00000371122 C11orf96Q7Z7L8 435 aa9.35□□□□□ -0.91
SMARCA1-202ENST00000371122 STKLD1Q8NE28 680 aa9.35□□□□□ -0.91
SMARCA1-202ENST00000371122 AGAP11Q8TF27 550 aa9.35□□□□□ -0.91
SMARCA1-202ENST00000371122 RSPH1Q8WYR4 309 aa9.35□□□□□ -0.91
SMARCA1-202ENST00000371122 TFAP2BQ92481 460 aa9.35□□□□□ -0.91
SMARCA1-202ENST00000371122 CENPKQ9BS16 269 aa9.35□□□□□ -0.91
SMARCA1-202ENST00000371122 GPAMQ9HCL2 828 aa9.35□□□□□ -0.91
SMARCA1-202ENST00000371122 GPRC5DQ9NZD1 345 aa9.35□□□□□ -0.91
SMARCA1-202ENST00000371122 FAM50BQ9Y247 325 aa9.35□□□□□ -0.91
SMARCA1-202ENST00000371122 RRN3P2A6NIE6 340 aa9.35□□□□□ -0.91
SMARCA1-202ENST00000371122 STX7O15400 261 aaKnown RBP9.35□□□□□ -0.91
SMARCA1-202ENST00000371122 PAPSS1O43252 624 aaPredicted RBP9.35□□□□□ -0.91
SMARCA1-202ENST00000371122 SLC26A4O43511 780 aa9.35□□□□□ -0.91
SMARCA1-202ENST00000371122 LIASO43766 372 aa9.35□□□□□ -0.91
SMARCA1-202ENST00000371122 BAIAP3O94812 1187 aa9.35□□□□□ -0.91
SMARCA1-202ENST00000371122 PROCP04070 461 aa9.35□□□□□ -0.91
SMARCA1-202ENST00000371122 OR4Q2P0C623 313 aa9.35□□□□□ -0.91
SMARCA1-202ENST00000371122 GSSP48637 474 aa9.35□□□□□ -0.91
SMARCA1-202ENST00000371122 MCL1Q07820 350 aa9.35□□□□□ -0.91
SMARCA1-202ENST00000371122 ACVR2BQ13705 512 aa9.35□□□□□ -0.91
SMARCA1-202ENST00000371122 MYBPC2Q14324 1141 aa9.35□□□□□ -0.91
SMARCA1-202ENST00000371122 OVOS1Q6IE37 1185 aa9.35□□□□□ -0.91
SMARCA1-202ENST00000371122 BTNL9Q6UXG8 535 aa9.35□□□□□ -0.91
SMARCA1-202ENST00000371122 CLEC4FQ8N1N0 589 aa9.35□□□□□ -0.91
SMARCA1-202ENST00000371122 DNERQ8NFT8 737 aa9.35□□□□□ -0.91
SMARCA1-202ENST00000371122 HELQQ8TDG4 1101 aa9.35□□□□□ -0.91
SMARCA1-202ENST00000371122 SENP8Q96LD8 212 aa9.35□□□□□ -0.91
SMARCA1-202ENST00000371122 NDNQ99608 321 aa9.35□□□□□ -0.91
SMARCA1-202ENST00000371122 TSPYL2Q9H2G4 693 aaPredicted RBP9.35□□□□□ -0.91
SMARCA1-202ENST00000371122 YY1AP1Q9H869 796 aa9.35□□□□□ -0.91
SMARCA1-202ENST00000371122 CAB39LQ9H9S4 337 aa9.35□□□□□ -0.91
SMARCA1-202ENST00000371122 XPNPEP1Q9NQW7 623 aa9.35□□□□□ -0.91
SMARCA1-202ENST00000371122 KCND1Q9NSA2 647 aa9.35□□□□□ -0.91
SMARCA1-202ENST00000371122 CCDC167Q9P0B6 97 aa9.35□□□□□ -0.91
SMARCA1-202ENST00000371122 SUFUQ9UMX1 484 aa9.35□□□□□ -0.91
SMARCA1-202ENST00000371122 AK5Q9Y6K8 562 aa9.35□□□□□ -0.91
SMARCA1-202ENST00000371122 TGFB3P10600 412 aa9.34□□□□□ -0.91
SMARCA1-202ENST00000371122 BRCC3P46736 316 aa9.34□□□□□ -0.91
SMARCA1-202ENST00000371122 TUBP50607 506 aa9.34□□□□□ -0.91
SMARCA1-202ENST00000371122 KPNB1Q14974 876 aaKnown RBP9.34□□□□□ -0.91
SMARCA1-202ENST00000371122 AGKQ53H12 422 aa9.34□□□□□ -0.91
SMARCA1-202ENST00000371122 RARS2Q5T160 578 aaKnown RBP9.34□□□□□ -0.91
SMARCA1-202ENST00000371122 ZPBP2Q6X784 338 aa9.34□□□□□ -0.91
SMARCA1-202ENST00000371122 SCUBE1Q8IWY4 988 aa9.34□□□□□ -0.91
SMARCA1-202ENST00000371122 PCDH20Q8N6Y1 951 aaKnown RBP9.34□□□□□ -0.91
SMARCA1-202ENST00000371122 LENG9Q96B70 501 aa9.34□□□□□ -0.91
SMARCA1-202ENST00000371122 ACO2Q99798 780 aaKnown RBP9.34□□□□□ -0.91
SMARCA1-202ENST00000371122 MRPL45Q9BRJ2 306 aaKnown RBP9.34□□□□□ -0.91
SMARCA1-202ENST00000371122 APOBEC3GQ9HC16 384 aaKnown RBP9.34□□□□□ -0.91
SMARCA1-202ENST00000371122 APPL1Q9UKG1 709 aa9.34□□□□□ -0.91
SMARCA1-202ENST00000371122 CDYLQ9Y232 598 aa9.34□□□□□ -0.91
SMARCA1-202ENST00000371122 SLC27A5Q9Y2P5 690 aa9.34□□□□□ -0.91
SMARCA1-202ENST00000371122 COL1A1P02452 1464 aaPredicted RBP9.34□□□□□ -0.91
SMARCA1-202ENST00000371122 GPR25O00155 361 aa9.34□□□□□ -0.91
SMARCA1-202ENST00000371122 DDX3YO15523 660 aaKnown RBP9.34□□□□□ -0.91
SMARCA1-202ENST00000371122 PQBP1O60828 265 aaKnown RBP9.34□□□□□ -0.91
SMARCA1-202ENST00000371122 MUTP22033 750 aa9.34□□□□□ -0.91
SMARCA1-202ENST00000371122 EIF4BP23588 611 aaKnown RBP9.34□□□□□ -0.91
SMARCA1-202ENST00000371122 POM121L1PQ3SYA9 428 aa9.34□□□□□ -0.91
SMARCA1-202ENST00000371122 ANKRD22Q5VYY1 191 aa9.34□□□□□ -0.91
SMARCA1-202ENST00000371122 SLC27A1Q6PCB7 646 aa9.34□□□□□ -0.91
SMARCA1-202ENST00000371122 IZUMO2Q6UXV1 221 aa9.34□□□□□ -0.91
SMARCA1-202ENST00000371122 C16orf59Q7L2K0 433 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms