RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 TMEM150BA6NC51 233 aa16.49■□□□□ 0.23
NPHP3-201ENST00000337331 PDLIM1O00151 329 aa16.49■□□□□ 0.23
NPHP3-201ENST00000337331 TSPAN9O75954 239 aa16.49■□□□□ 0.23
NPHP3-201ENST00000337331 NAMPTP43490 491 aa16.49■□□□□ 0.23
NPHP3-201ENST00000337331 C16orf89Q6UX73 402 aa16.49■□□□□ 0.23
NPHP3-201ENST00000337331 ASIC4Q96FT7 647 aa16.49■□□□□ 0.23
NPHP3-201ENST00000337331 MTMR9Q96QG7 549 aa16.49■□□□□ 0.23
NPHP3-201ENST00000337331 RNPEPQ9H4A4 650 aa16.49■□□□□ 0.23
NPHP3-201ENST00000337331 EML4Q9HC35 981 aaKnown RBP16.49■□□□□ 0.23
NPHP3-201ENST00000337331 TJP2Q9UDY2 1190 aa16.49■□□□□ 0.23
NPHP3-201ENST00000337331 GNEQ9Y223 722 aaKnown RBP16.49■□□□□ 0.23
NPHP3-201ENST00000337331 MAGEC1O60732 1142 aa16.49■□□□□ 0.23
NPHP3-201ENST00000337331 CD4P01730 458 aa16.49■□□□□ 0.23
NPHP3-201ENST00000337331 ZSCAN5DPP0CG00 497 aa16.49■□□□□ 0.23
NPHP3-201ENST00000337331 GRIK1P39086 918 aa16.49■□□□□ 0.23
NPHP3-201ENST00000337331 SPIDRQ14159 915 aa16.49■□□□□ 0.23
NPHP3-201ENST00000337331 AMHR2Q16671 573 aa16.49■□□□□ 0.23
NPHP3-201ENST00000337331 STYK1Q6J9G0 422 aa16.49■□□□□ 0.23
NPHP3-201ENST00000337331 ARHGEF19Q8IW93 802 aa16.49■□□□□ 0.23
NPHP3-201ENST00000337331 ZCCHC7Q8N3Z6 543 aaKnown RBP16.49■□□□□ 0.23
NPHP3-201ENST00000337331 GMCL1P1Q8NEA9 526 aa16.49■□□□□ 0.23
NPHP3-201ENST00000337331 LNX1Q8TBB1 728 aaPredicted RBP16.49■□□□□ 0.23
NPHP3-201ENST00000337331 GIN1Q9NXP7 522 aa16.49■□□□□ 0.23
NPHP3-201ENST00000337331 ABT1Q9ULW3 272 aaKnown RBP16.49■□□□□ 0.23
NPHP3-201ENST00000337331 CYP2C9P11712 490 aa16.49■□□□□ 0.23
NPHP3-201ENST00000337331 GNL1P36915 607 aaPredicted RBP16.49■□□□□ 0.23
NPHP3-201ENST00000337331 ACADSBP45954 432 aa16.49■□□□□ 0.23
NPHP3-201ENST00000337331 PKNOX1P55347 436 aa16.49■□□□□ 0.23
NPHP3-201ENST00000337331 SPOCD1Q6ZMY3 1216 aa16.49■□□□□ 0.23
NPHP3-201ENST00000337331 VPS33BQ9H267 617 aa16.49■□□□□ 0.23
NPHP3-201ENST00000337331 AFF4Q9UHB7 1163 aaKnown RBP16.49■□□□□ 0.23
NPHP3-201ENST00000337331 SLC8A2Q9UPR5 921 aa16.49■□□□□ 0.23
NPHP3-201ENST00000337331 GSTT2P0CG29 244 aa16.48■□□□□ 0.23
NPHP3-201ENST00000337331 GSTT2BP0CG30 244 aa16.48■□□□□ 0.23
NPHP3-201ENST00000337331 INHBCP55103 352 aa16.48■□□□□ 0.23
NPHP3-201ENST00000337331 ACTR3P61158 418 aa16.48■□□□□ 0.23
NPHP3-201ENST00000337331 CMPK2Q5EBM0 449 aa16.48■□□□□ 0.23
NPHP3-201ENST00000337331 NOP9Q86U38 636 aaKnown RBP16.48■□□□□ 0.23
NPHP3-201ENST00000337331 HPS6Q86YV9 775 aa16.48■□□□□ 0.23
NPHP3-201ENST00000337331 WNK4Q96J92 1243 aa16.48■□□□□ 0.23
NPHP3-201ENST00000337331 ELMO2Q96JJ3 720 aa16.48■□□□□ 0.23
NPHP3-201ENST00000337331 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.48■□□□□ 0.23
NPHP3-201ENST00000337331 MYOCOSA0A1B0GUC4 107 aa16.48■□□□□ 0.23
NPHP3-201ENST00000337331 DDX3YO15523 660 aaKnown RBP16.48■□□□□ 0.23
NPHP3-201ENST00000337331 DCXO43602 365 aa16.48■□□□□ 0.23
NPHP3-201ENST00000337331 APOA1P02647 267 aa16.48■□□□□ 0.23
NPHP3-201ENST00000337331 CLEC16AQ2KHT3 1053 aa16.48■□□□□ 0.23
NPHP3-201ENST00000337331 CBWD6Q4V339 395 aa16.48■□□□□ 0.23
NPHP3-201ENST00000337331 CBWD3Q5JTY5 395 aa16.48■□□□□ 0.23
NPHP3-201ENST00000337331 CBWD5Q5RIA9 395 aa16.48■□□□□ 0.23
NPHP3-201ENST00000337331 ACOT1Q86TX2 421 aa16.48■□□□□ 0.23
NPHP3-201ENST00000337331 CDRT15Q96T59 188 aa16.48■□□□□ 0.23
NPHP3-201ENST00000337331 MIPEPQ99797 713 aa16.48■□□□□ 0.23
NPHP3-201ENST00000337331 CAB39Q9Y376 341 aaPredicted RBP16.48■□□□□ 0.23
NPHP3-201ENST00000337331 TNS2Q63HR2 1409 aa16.48■□□□□ 0.23
NPHP3-201ENST00000337331 FOXD2O60548 495 aaPredicted RBP16.48■□□□□ 0.23
NPHP3-201ENST00000337331 SUPT20HL2P0C7V6 817 aa16.48■□□□□ 0.23
NPHP3-201ENST00000337331 LAYNQ6UX15 382 aa16.48■□□□□ 0.23
NPHP3-201ENST00000337331 MCOLN2Q8IZK6 566 aa16.48■□□□□ 0.23
NPHP3-201ENST00000337331 DCLK3Q9C098 648 aa16.48■□□□□ 0.23
NPHP3-201ENST00000337331 KCNK4Q9NYG8 393 aa16.48■□□□□ 0.23
NPHP3-201ENST00000337331 FAM8A1Q9UBU6 413 aa16.48■□□□□ 0.23
NPHP3-201ENST00000337331 MYH7BA7E2Y1 1941 aa16.47■□□□□ 0.23
NPHP3-201ENST00000337331 A0A087WXM4 84 aa16.47■□□□□ 0.23
NPHP3-201ENST00000337331 KCNA4P22459 653 aa16.47■□□□□ 0.23
NPHP3-201ENST00000337331 BFSP2Q13515 415 aa16.47■□□□□ 0.23
NPHP3-201ENST00000337331 UBAP2Q5T6F2 1119 aaKnown RBP16.47■□□□□ 0.23
NPHP3-201ENST00000337331 BNC2Q6ZN30 1099 aaPredicted RBP16.47■□□□□ 0.23
NPHP3-201ENST00000337331 SLC7A5P1Q8MH63 180 aa16.47■□□□□ 0.23
NPHP3-201ENST00000337331 ABRAQ8N0Z2 381 aa16.47■□□□□ 0.23
NPHP3-201ENST00000337331 PQLC1Q8N2U9 271 aa16.47■□□□□ 0.23
NPHP3-201ENST00000337331 AGBL3Q8NEM8 1001 aa16.47■□□□□ 0.23
NPHP3-201ENST00000337331 PBXIP1Q96AQ6 731 aa16.47■□□□□ 0.23
NPHP3-201ENST00000337331 SLC4A9Q96Q91 983 aa16.47■□□□□ 0.23
NPHP3-201ENST00000337331 OSBPL10Q9BXB5 764 aa16.47■□□□□ 0.23
NPHP3-201ENST00000337331 ASNA1O43681 348 aa16.47■□□□□ 0.23
NPHP3-201ENST00000337331 ZNF862O60290 1169 aa16.47■□□□□ 0.23
NPHP3-201ENST00000337331 HMBSP08397 361 aa16.47■□□□□ 0.23
NPHP3-201ENST00000337331 NCAM1P13591 858 aa16.47■□□□□ 0.23
NPHP3-201ENST00000337331 FOXB2Q5VYV0 432 aa16.47■□□□□ 0.23
NPHP3-201ENST00000337331 SPATA2LQ8IUW3 424 aaPredicted RBP16.47■□□□□ 0.23
NPHP3-201ENST00000337331 SUN5Q8TC36 379 aa16.47■□□□□ 0.23
NPHP3-201ENST00000337331 HELQQ8TDG4 1101 aa16.47■□□□□ 0.23
NPHP3-201ENST00000337331 ZNF606Q8WXB4 792 aa16.47■□□□□ 0.23
NPHP3-201ENST00000337331 CGRRF1Q99675 332 aa16.47■□□□□ 0.23
NPHP3-201ENST00000337331 NRDE2Q9H7Z3 1164 aa16.47■□□□□ 0.23
NPHP3-201ENST00000337331 PRKCIP41743 596 aa16.47■□□□□ 0.23
NPHP3-201ENST00000337331 STT3AP46977 705 aa16.47■□□□□ 0.23
NPHP3-201ENST00000337331 MAP3K7CLP57077 242 aa16.47■□□□□ 0.23
NPHP3-201ENST00000337331 CDC42EP1Q00587 391 aa16.47■□□□□ 0.23
NPHP3-201ENST00000337331 KAT5Q92993 513 aa16.47■□□□□ 0.23
NPHP3-201ENST00000337331 GPAMQ9HCL2 828 aa16.47■□□□□ 0.23
NPHP3-201ENST00000337331 BMPR2Q13873 1038 aa16.47■□□□□ 0.23
NPHP3-201ENST00000337331 C4orf22Q6V702 233 aa16.47■□□□□ 0.23
NPHP3-201ENST00000337331 SZRD1Q7Z422 152 aa16.47■□□□□ 0.23
NPHP3-201ENST00000337331 SKA1Q96BD8 255 aa16.47■□□□□ 0.23
NPHP3-201ENST00000337331 AGO4Q9HCK5 861 aaKnown RBP16.47■□□□□ 0.23
NPHP3-201ENST00000337331 HACL1Q9UJ83 578 aa16.47■□□□□ 0.23
NPHP3-201ENST00000337331 NOTOA8MTQ0 251 aa16.46■□□□□ 0.23
NPHP3-201ENST00000337331 BANF1O75531 89 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 123.6 ms