RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 UBDO15205 165 aa17.53■□□□□ 0.4
TRAPPC11-201ENST00000334690 HOXA2O43364 376 aa17.53■□□□□ 0.4
TRAPPC11-201ENST00000334690 EGFRP00533 1210 aa17.53■□□□□ 0.4
TRAPPC11-201ENST00000334690 SHBGP04278 402 aa17.53■□□□□ 0.4
TRAPPC11-201ENST00000334690 KPNA1P52294 538 aaPredicted RBP17.53■□□□□ 0.4
TRAPPC11-201ENST00000334690 NOMO3P69849 1222 aa17.53■□□□□ 0.4
TRAPPC11-201ENST00000334690 SLC34A1Q06495 639 aa17.53■□□□□ 0.4
TRAPPC11-201ENST00000334690 TBL3Q12788 808 aaKnown RBP17.53■□□□□ 0.4
TRAPPC11-201ENST00000334690 EFEMP1Q12805 493 aa17.53■□□□□ 0.4
TRAPPC11-201ENST00000334690 POU6F1Q14863 301 aa17.53■□□□□ 0.4
TRAPPC11-201ENST00000334690 SPDYE7PQ495Y7 208 aa17.53■□□□□ 0.4
TRAPPC11-201ENST00000334690 SNX30Q5VWJ9 437 aa17.53■□□□□ 0.4
TRAPPC11-201ENST00000334690 IZUMO2Q6UXV1 221 aa17.53■□□□□ 0.4
TRAPPC11-201ENST00000334690 ANKS3Q6ZW76 656 aa17.53■□□□□ 0.4
TRAPPC11-201ENST00000334690 TMEM161AQ9NX61 479 aa17.53■□□□□ 0.4
TRAPPC11-201ENST00000334690 hCG_2014768A0A024R1R8 64 aa17.53■□□□□ 0.4
TRAPPC11-201ENST00000334690 ATXN8OSP0DMR3 200 aa17.53■□□□□ 0.4
TRAPPC11-201ENST00000334690 ECM1Q16610 540 aa17.53■□□□□ 0.4
TRAPPC11-201ENST00000334690 CTXN3Q4LDR2 81 aa17.53■□□□□ 0.4
TRAPPC11-201ENST00000334690 ZC3H12BQ5HYM0 836 aaKnown RBP17.53■□□□□ 0.4
TRAPPC11-201ENST00000334690 MRC1P22897 1456 aa17.53■□□□□ 0.4
TRAPPC11-201ENST00000334690 SLC12A8A0AV02 714 aa17.52■□□□□ 0.4
TRAPPC11-201ENST00000334690 WDR27A2RRH5 827 aa17.52■□□□□ 0.4
TRAPPC11-201ENST00000334690 M0R3G1 203 aa17.52■□□□□ 0.4
TRAPPC11-201ENST00000334690 ASS1P00966 412 aaKnown RBP17.52■□□□□ 0.4
TRAPPC11-201ENST00000334690 SERPINF2P08697 491 aa17.52■□□□□ 0.4
TRAPPC11-201ENST00000334690 RAB27AP51159 221 aa17.52■□□□□ 0.4
TRAPPC11-201ENST00000334690 ZNF143P52747 638 aaPredicted RBP17.52■□□□□ 0.4
TRAPPC11-201ENST00000334690 NCKAP1LP55160 1127 aa17.52■□□□□ 0.4
TRAPPC11-201ENST00000334690 LRRC74AQ0VAA2 488 aa17.52■□□□□ 0.4
TRAPPC11-201ENST00000334690 ZNF280DQ6N043 979 aa17.52■□□□□ 0.4
TRAPPC11-201ENST00000334690 PKN3Q6P5Z2 889 aa17.52■□□□□ 0.4
TRAPPC11-201ENST00000334690 DDX53Q86TM3 631 aaKnown RBP17.52■□□□□ 0.4
TRAPPC11-201ENST00000334690 ZSWIM2Q8NEG5 633 aa17.52■□□□□ 0.4
TRAPPC11-201ENST00000334690 ALG3Q92685 438 aa17.52■□□□□ 0.4
TRAPPC11-201ENST00000334690 VAV3Q9UKW4 847 aa17.52■□□□□ 0.4
TRAPPC11-201ENST00000334690 ITGAVP06756 1048 aa17.52■□□□□ 0.4
TRAPPC11-201ENST00000334690 KCNA4P22459 653 aa17.52■□□□□ 0.4
TRAPPC11-201ENST00000334690 CRABP2P29373 138 aa17.52■□□□□ 0.4
TRAPPC11-201ENST00000334690 PCYT1AP49585 367 aa17.52■□□□□ 0.4
TRAPPC11-201ENST00000334690 ELAVL2Q12926 359 aaKnown RBP17.52■□□□□ 0.4
TRAPPC11-201ENST00000334690 RIOX2Q8IUF8 465 aa17.52■□□□□ 0.4
TRAPPC11-201ENST00000334690 PCSK9Q8NBP7 692 aaKnown RBP17.52■□□□□ 0.4
TRAPPC11-201ENST00000334690 SMARCD1Q96GM5 515 aa17.52■□□□□ 0.4
TRAPPC11-201ENST00000334690 CLPBQ9H078 707 aa17.52■□□□□ 0.4
TRAPPC11-201ENST00000334690 KCNK4Q9NYG8 393 aa17.52■□□□□ 0.4
TRAPPC11-201ENST00000334690 NID2Q14112 1375 aa17.52■□□□□ 0.4
TRAPPC11-201ENST00000334690 GOLGA8TH3BQL2 631 aa17.52■□□□□ 0.39
TRAPPC11-201ENST00000334690 ZCCHC18P0CG32 403 aa17.52■□□□□ 0.39
TRAPPC11-201ENST00000334690 MTA1Q13330 715 aa17.52■□□□□ 0.39
TRAPPC11-201ENST00000334690 AGKQ53H12 422 aa17.52■□□□□ 0.39
TRAPPC11-201ENST00000334690 HGSNATQ68CP4 663 aa17.52■□□□□ 0.39
TRAPPC11-201ENST00000334690 ADCK1Q86TW2 530 aa17.52■□□□□ 0.39
TRAPPC11-201ENST00000334690 EDEM1Q92611 657 aa17.52■□□□□ 0.39
TRAPPC11-201ENST00000334690 HSFY1Q96LI6 401 aa17.52■□□□□ 0.39
TRAPPC11-201ENST00000334690 CNBD2Q96M20 576 aa17.52■□□□□ 0.39
TRAPPC11-201ENST00000334690 FBXO44Q9H4M3 255 aa17.52■□□□□ 0.39
TRAPPC11-201ENST00000334690 AP4S1Q9Y587 144 aa17.52■□□□□ 0.39
TRAPPC11-201ENST00000334690 C3P01024 1663 aa17.52■□□□□ 0.39
TRAPPC11-201ENST00000334690 CAMTA1Q9Y6Y1 1673 aa17.52■□□□□ 0.39
TRAPPC11-201ENST00000334690 HOXB8P17481 243 aaPredicted RBP17.52■□□□□ 0.39
TRAPPC11-201ENST00000334690 BTKQ06187 659 aa17.52■□□□□ 0.39
TRAPPC11-201ENST00000334690 PLD3Q8IV08 490 aa17.52■□□□□ 0.39
TRAPPC11-201ENST00000334690 HS6ST3Q8IZP7 471 aa17.52■□□□□ 0.39
TRAPPC11-201ENST00000334690 ALLCQ8N6M5 410 aa17.52■□□□□ 0.39
TRAPPC11-201ENST00000334690 ZNF398Q8TD17 642 aa17.52■□□□□ 0.39
TRAPPC11-201ENST00000334690 CEP41Q9BYV8 373 aa17.52■□□□□ 0.39
TRAPPC11-201ENST00000334690 ADGRA3Q8IWK6 1321 aa17.51■□□□□ 0.39
TRAPPC11-201ENST00000334690 ITGALP20701 1170 aa17.51■□□□□ 0.39
TRAPPC11-201ENST00000334690 ACAT1P24752 427 aaKnown RBP17.51■□□□□ 0.39
TRAPPC11-201ENST00000334690 EPHX2P34913 555 aa17.51■□□□□ 0.39
TRAPPC11-201ENST00000334690 PARP6Q2NL67 630 aa17.51■□□□□ 0.39
TRAPPC11-201ENST00000334690 CATSPERGQ6ZRH7 1159 aa17.51■□□□□ 0.39
TRAPPC11-201ENST00000334690 PACS2Q86VP3 889 aa17.51■□□□□ 0.39
TRAPPC11-201ENST00000334690 HORMAD1Q86X24 394 aa17.51■□□□□ 0.39
TRAPPC11-201ENST00000334690 DNAJB3Q8WWF6 145 aa17.51■□□□□ 0.39
TRAPPC11-201ENST00000334690 CELF6Q96J87 481 aaKnown RBP17.51■□□□□ 0.39
TRAPPC11-201ENST00000334690 VPS50Q96JG6 964 aa17.51■□□□□ 0.39
TRAPPC11-201ENST00000334690 MYLK2Q9H1R3 596 aa17.51■□□□□ 0.39
TRAPPC11-201ENST00000334690 DMAP1Q9NPF5 467 aaPredicted RBP17.51■□□□□ 0.39
TRAPPC11-201ENST00000334690 TRPM5Q9NZQ8 1165 aa17.51■□□□□ 0.39
TRAPPC11-201ENST00000334690 CTNNAL1Q9UBT7 734 aa17.51■□□□□ 0.39
TRAPPC11-201ENST00000334690 SORCS3Q9UPU3 1222 aa17.51■□□□□ 0.39
TRAPPC11-201ENST00000334690 C15orf41Q9Y2V0 281 aa17.51■□□□□ 0.39
TRAPPC11-201ENST00000334690 ZNF711Q9Y462 761 aa17.51■□□□□ 0.39
TRAPPC11-201ENST00000334690 CASZ1Q86V15 1759 aa17.51■□□□□ 0.39
TRAPPC11-201ENST00000334690 LCA5LO95447 670 aa17.51■□□□□ 0.39
TRAPPC11-201ENST00000334690 AKAP5P24588 427 aa17.51■□□□□ 0.39
TRAPPC11-201ENST00000334690 TM4SF1P30408 202 aa17.51■□□□□ 0.39
TRAPPC11-201ENST00000334690 NOS2P35228 1153 aa17.51■□□□□ 0.39
TRAPPC11-201ENST00000334690 NEK2P51955 445 aa17.51■□□□□ 0.39
TRAPPC11-201ENST00000334690 STK32AQ8WU08 396 aa17.51■□□□□ 0.39
TRAPPC11-201ENST00000334690 ADGRE3Q9BY15 652 aa17.51■□□□□ 0.39
TRAPPC11-201ENST00000334690 MTIF3Q9H2K0 278 aaKnown RBP17.51■□□□□ 0.39
TRAPPC11-201ENST00000334690 ZNF229Q9UJW7 825 aa17.51■□□□□ 0.39
TRAPPC11-201ENST00000334690 ASTN2O75129 1339 aaPredicted RBP17.51■□□□□ 0.39
TRAPPC11-201ENST00000334690 MAFO75444 373 aaPredicted RBP17.51■□□□□ 0.39
TRAPPC11-201ENST00000334690 CBX6O95503 412 aa17.51■□□□□ 0.39
TRAPPC11-201ENST00000334690 NUP107P57740 925 aa17.51■□□□□ 0.39
TRAPPC11-201ENST00000334690 NFYCQ13952 458 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms