RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 FEM1BQ9UK73 627 aa5.07□□□□□ -1.6
CCDC54-201ENST00000261058 GJD2Q9UKL4 321 aa5.07□□□□□ -1.6
CCDC54-201ENST00000261058 PCDHB7Q9Y5E2 793 aa5.07□□□□□ -1.6
CCDC54-201ENST00000261058 MBD3L5A6NJ08 208 aaPredicted RBP5.06□□□□□ -1.6
CCDC54-201ENST00000261058 BTBD19C9JJ37 291 aa5.06□□□□□ -1.6
CCDC54-201ENST00000261058 FSHBP01225 129 aa5.06□□□□□ -1.6
CCDC54-201ENST00000261058 THBS4P35443 961 aa5.06□□□□□ -1.6
CCDC54-201ENST00000261058 PPM1FP49593 454 aaPredicted RBP5.06□□□□□ -1.6
CCDC54-201ENST00000261058 MCM2P49736 904 aa5.06□□□□□ -1.6
CCDC54-201ENST00000261058 JAK3P52333 1124 aa5.06□□□□□ -1.6
CCDC54-201ENST00000261058 RPL15P61313 204 aaKnown RBP5.06□□□□□ -1.6
CCDC54-201ENST00000261058 RBM6P78332 1123 aaKnown RBP5.06□□□□□ -1.6
CCDC54-201ENST00000261058 TLE3Q04726 772 aa5.06□□□□□ -1.6
CCDC54-201ENST00000261058 BIRC3Q13489 604 aa5.06□□□□□ -1.6
CCDC54-201ENST00000261058 CUL4BQ13620 913 aa5.06□□□□□ -1.6
CCDC54-201ENST00000261058 DCTN1Q14203 1278 aa5.06□□□□□ -1.6
CCDC54-201ENST00000261058 LARS2Q15031 903 aaKnown RBP5.06□□□□□ -1.6
CCDC54-201ENST00000261058 P3H1Q32P28 736 aa5.06□□□□□ -1.6
CCDC54-201ENST00000261058 TBRG1Q3YBR2 411 aa5.06□□□□□ -1.6
CCDC54-201ENST00000261058 DGAT2L7PQ6IED9 249 aa5.06□□□□□ -1.6
CCDC54-201ENST00000261058 NAPRTQ6XQN6 538 aa5.06□□□□□ -1.6
CCDC54-201ENST00000261058 TRIM72Q6ZMU5 477 aa5.06□□□□□ -1.6
CCDC54-201ENST00000261058 KRT27Q7Z3Y8 459 aa5.06□□□□□ -1.6
CCDC54-201ENST00000261058 ANKS1BQ7Z6G8 1248 aa5.06□□□□□ -1.6
CCDC54-201ENST00000261058 ZNF354CQ86Y25 554 aa5.06□□□□□ -1.6
CCDC54-201ENST00000261058 FAM71DQ8N9W8 422 aa5.06□□□□□ -1.6
CCDC54-201ENST00000261058 MAFAQ8NHW3 353 aaPredicted RBP5.06□□□□□ -1.6
CCDC54-201ENST00000261058 CPT1BQ92523 772 aa5.06□□□□□ -1.6
CCDC54-201ENST00000261058 RILPL2Q969X0 211 aa5.06□□□□□ -1.6
CCDC54-201ENST00000261058 DAZAP1Q96EP5 407 aaKnown RBP5.06□□□□□ -1.6
CCDC54-201ENST00000261058 EIF3CQ99613 913 aaKnown RBP5.06□□□□□ -1.6
CCDC54-201ENST00000261058 NPAS1Q99742 590 aa5.06□□□□□ -1.6
CCDC54-201ENST00000261058 FAM167BQ9BTA0 163 aa5.06□□□□□ -1.6
CCDC54-201ENST00000261058 ELAC1Q9H777 363 aaKnown RBP5.06□□□□□ -1.6
CCDC54-201ENST00000261058 IL17RBQ9NRM6 502 aa5.06□□□□□ -1.6
CCDC54-201ENST00000261058 RASSF1Q9NS23 344 aa5.06□□□□□ -1.6
CCDC54-201ENST00000261058 LIN7CQ9NUP9 197 aaKnown RBP5.06□□□□□ -1.6
CCDC54-201ENST00000261058 PCDHB2Q9Y5E7 798 aa5.06□□□□□ -1.6
CCDC54-201ENST00000261058 CCDC189A1A4V9 331 aa5.06□□□□□ -1.6
CCDC54-201ENST00000261058 HMX3A6NHT5 357 aa5.06□□□□□ -1.6
CCDC54-201ENST00000261058 PROP1O75360 226 aa5.06□□□□□ -1.6
CCDC54-201ENST00000261058 C1RP00736 705 aa5.06□□□□□ -1.6
CCDC54-201ENST00000261058 SFPQP23246 707 aaKnown RBP eCLIP5.06□□□□□ -1.6
CCDC54-201ENST00000261058 SERPINA4P29622 427 aa5.06□□□□□ -1.6
CCDC54-201ENST00000261058 COPB1P53618 953 aaKnown RBP5.06□□□□□ -1.6
CCDC54-201ENST00000261058 HSP90AB4PQ58FF6 505 aa5.06□□□□□ -1.6
CCDC54-201ENST00000261058 FTSJ3Q8IY81 847 aaKnown RBP5.06□□□□□ -1.6
CCDC54-201ENST00000261058 LAS2Q8IYD9 372 aa5.06□□□□□ -1.6
CCDC54-201ENST00000261058 HMGB4Q8WW32 186 aa5.06□□□□□ -1.6
CCDC54-201ENST00000261058 CHFRQ96EP1 664 aa5.06□□□□□ -1.6
CCDC54-201ENST00000261058 REXO5Q96IC2 774 aaKnown RBP5.06□□□□□ -1.6
CCDC54-201ENST00000261058 CCDC134Q9H6E4 229 aa5.06□□□□□ -1.6
CCDC54-201ENST00000261058 TFCP2L1Q9NZI6 479 aa5.06□□□□□ -1.6
CCDC54-201ENST00000261058 INSL6Q9Y581 213 aa5.06□□□□□ -1.6
CCDC54-201ENST00000261058 COL11A2P13942 1736 aaPredicted RBP5.05□□□□□ -1.6
CCDC54-201ENST00000261058 ARHGEF17Q96PE2 2063 aaPredicted RBP5.05□□□□□ -1.6
CCDC54-201ENST00000261058 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.05□□□□□ -1.6
CCDC54-201ENST00000261058 AKAP8O43823 692 aaKnown RBP5.05□□□□□ -1.6
CCDC54-201ENST00000261058 HEXIM1O94992 359 aaKnown RBP5.05□□□□□ -1.6
CCDC54-201ENST00000261058 TFRCP02786 760 aaKnown RBP5.05□□□□□ -1.6
CCDC54-201ENST00000261058 GPD1P21695 349 aa5.05□□□□□ -1.6
CCDC54-201ENST00000261058 ACTR2P61160 394 aa5.05□□□□□ -1.6
CCDC54-201ENST00000261058 GAB1Q13480 694 aa5.05□□□□□ -1.6
CCDC54-201ENST00000261058 CBFBQ13951 182 aa5.05□□□□□ -1.6
CCDC54-201ENST00000261058 KYAT3Q6YP21 454 aaKnown RBP5.05□□□□□ -1.6
CCDC54-201ENST00000261058 RRAGAQ7L523 313 aa5.05□□□□□ -1.6
CCDC54-201ENST00000261058 RASGRP2Q7LDG7 609 aa5.05□□□□□ -1.6
CCDC54-201ENST00000261058 HERVK_113Q902F9 699 aa5.05□□□□□ -1.6
CCDC54-201ENST00000261058 P2RY11Q96G91 374 aa5.05□□□□□ -1.6
CCDC54-201ENST00000261058 UBXN10Q96LJ8 280 aa5.05□□□□□ -1.6
CCDC54-201ENST00000261058 ELOVL1Q9BW60 279 aa5.05□□□□□ -1.6
CCDC54-201ENST00000261058 GATA5Q9BWX5 397 aaPredicted RBP5.05□□□□□ -1.6
CCDC54-201ENST00000261058 TAF1DQ9H5J8 278 aaPredicted RBP5.05□□□□□ -1.6
CCDC54-201ENST00000261058 USP29Q9HBJ7 922 aa5.05□□□□□ -1.6
CCDC54-201ENST00000261058 CPNE5Q9HCH3 593 aa5.05□□□□□ -1.6
CCDC54-201ENST00000261058 ASB6Q9NWX5 421 aa5.05□□□□□ -1.6
CCDC54-201ENST00000261058 AOX1Q06278 1338 aa5.05□□□□□ -1.6
CCDC54-201ENST00000261058 WDR33Q9C0J8 1336 aaKnown RBP5.05□□□□□ -1.6
CCDC54-201ENST00000261058 CYP3A7-CYP3A51PA0A087WV96 503 aa5.04□□□□□ -1.6
CCDC54-201ENST00000261058 CLIC1O00299 241 aa5.04□□□□□ -1.6
CCDC54-201ENST00000261058 PRYO14603 147 aa5.04□□□□□ -1.6
CCDC54-201ENST00000261058 FYB1O15117 783 aa5.04□□□□□ -1.6
CCDC54-201ENST00000261058 EXOC3O60645 756 aa5.04□□□□□ -1.6
CCDC54-201ENST00000261058 CYP3A7P24462 503 aa5.04□□□□□ -1.6
CCDC54-201ENST00000261058 TGFB2P61812 414 aa5.04□□□□□ -1.6
CCDC54-201ENST00000261058 WDR5P61964 334 aaKnown RBP5.04□□□□□ -1.6
CCDC54-201ENST00000261058 MFSD13AQ14CX5 517 aa5.04□□□□□ -1.6
CCDC54-201ENST00000261058 ADCK5Q3MIX3 580 aa5.04□□□□□ -1.6
CCDC54-201ENST00000261058 AMIGO2Q86SJ2 522 aa5.04□□□□□ -1.6
CCDC54-201ENST00000261058 ZNF398Q8TD17 642 aa5.04□□□□□ -1.6
CCDC54-201ENST00000261058 ADAMTS18Q8TE60 1221 aa5.04□□□□□ -1.6
CCDC54-201ENST00000261058 ASB12Q8WXK4 309 aa5.04□□□□□ -1.6
CCDC54-201ENST00000261058 RUBCNQ92622 972 aa5.04□□□□□ -1.6
CCDC54-201ENST00000261058 TRIM63Q969Q1 353 aa5.04□□□□□ -1.6
CCDC54-201ENST00000261058 C3orf49Q96BT1 292 aa5.04□□□□□ -1.6
CCDC54-201ENST00000261058 EVI5LQ96CN4 794 aa5.04□□□□□ -1.6
CCDC54-201ENST00000261058 HIC2Q96JB3 615 aa5.04□□□□□ -1.6
CCDC54-201ENST00000261058 RITA1Q96K30 269 aa5.04□□□□□ -1.6
CCDC54-201ENST00000261058 ZSCAN31Q96LW9 406 aaPredicted RBP5.04□□□□□ -1.6
CCDC54-201ENST00000261058 SORCS2Q96PQ0 1159 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms