RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 ZDHHC17Q8IUH5 632 aa18.68■□□□□ 0.58
SNRPA1-201ENST00000254193 ALLCQ8N6M5 410 aa18.68■□□□□ 0.58
SNRPA1-201ENST00000254193 SLC30A5Q8TAD4 765 aa18.68■□□□□ 0.58
SNRPA1-201ENST00000254193 BAP1Q92560 729 aa18.68■□□□□ 0.58
SNRPA1-201ENST00000254193 ACDQ96AP0 544 aa18.68■□□□□ 0.58
SNRPA1-201ENST00000254193 TMA16Q96EY4 203 aaKnown RBP18.68■□□□□ 0.58
SNRPA1-201ENST00000254193 FAM126AQ9BYI3 521 aaPredicted RBP18.68■□□□□ 0.58
SNRPA1-201ENST00000254193 FAM204AQ9H8W3 233 aa18.68■□□□□ 0.58
SNRPA1-201ENST00000254193 XPO7Q9UIA9 1087 aaKnown RBP18.68■□□□□ 0.58
SNRPA1-201ENST00000254193 FBXO10Q9UK96 956 aa18.68■□□□□ 0.58
SNRPA1-201ENST00000254193 PCDHGA2Q9Y5H1 932 aa18.68■□□□□ 0.58
SNRPA1-201ENST00000254193 MIA3Q5JRA6 1907 aa18.67■□□□□ 0.58
SNRPA1-201ENST00000254193 SYNJ2BP-COX16A0A087WUM0 186 aa18.67■□□□□ 0.58
SNRPA1-201ENST00000254193 PRRT4C9JH25 899 aa18.67■□□□□ 0.58
SNRPA1-201ENST00000254193 GOLGA8SH3BPF8 625 aa18.67■□□□□ 0.58
SNRPA1-201ENST00000254193 IRAK2O43187 625 aa18.67■□□□□ 0.58
SNRPA1-201ENST00000254193 DAB1O75553 588 aa18.67■□□□□ 0.58
SNRPA1-201ENST00000254193 KLF8O95600 359 aaPredicted RBP18.67■□□□□ 0.58
SNRPA1-201ENST00000254193 SLC6A4P31645 630 aa18.67■□□□□ 0.58
SNRPA1-201ENST00000254193 SGSHP51688 502 aa18.67■□□□□ 0.58
SNRPA1-201ENST00000254193 NRLP54845 237 aa18.67■□□□□ 0.58
SNRPA1-201ENST00000254193 MRPS21P82921 87 aaKnown RBP18.67■□□□□ 0.58
SNRPA1-201ENST00000254193 DMC1Q14565 340 aa18.67■□□□□ 0.58
SNRPA1-201ENST00000254193 MPPE1Q53F39 396 aa18.67■□□□□ 0.58
SNRPA1-201ENST00000254193 FAM133BQ5BKY9 247 aaKnown RBP18.67■□□□□ 0.58
SNRPA1-201ENST00000254193 FAM102AQ5T9C2 384 aaPredicted RBP18.67■□□□□ 0.58
SNRPA1-201ENST00000254193 NADSYN1Q6IA69 706 aa18.67■□□□□ 0.58
SNRPA1-201ENST00000254193 MMS22LQ6ZRQ5 1243 aa18.67■□□□□ 0.58
SNRPA1-201ENST00000254193 IL17RCQ8NAC3 791 aa18.67■□□□□ 0.58
SNRPA1-201ENST00000254193 MSANTD4Q8NCY6 345 aa18.67■□□□□ 0.58
SNRPA1-201ENST00000254193 ZNF397Q8NF99 534 aaPredicted RBP18.67■□□□□ 0.58
SNRPA1-201ENST00000254193 NKD2Q969F2 451 aaPredicted RBP18.67■□□□□ 0.58
SNRPA1-201ENST00000254193 AZIN2Q96A70 460 aa18.67■□□□□ 0.58
SNRPA1-201ENST00000254193 HHIPQ96QV1 700 aa18.67■□□□□ 0.58
SNRPA1-201ENST00000254193 DDIT4Q9NX09 232 aa18.67■□□□□ 0.58
SNRPA1-201ENST00000254193 COX16Q9P0S2 106 aa18.67■□□□□ 0.58
SNRPA1-201ENST00000254193 HCN2Q9UL51 889 aa18.67■□□□□ 0.58
SNRPA1-201ENST00000254193 FERP16591 822 aa18.66■□□□□ 0.58
SNRPA1-201ENST00000254193 HOXD9P28356 352 aaPredicted RBP18.66■□□□□ 0.58
SNRPA1-201ENST00000254193 UBASH3AP57075 661 aa18.66■□□□□ 0.58
SNRPA1-201ENST00000254193 EIF4EBP2Q13542 120 aaPredicted RBP18.66■□□□□ 0.58
SNRPA1-201ENST00000254193 TRIM72Q6ZMU5 477 aa18.66■□□□□ 0.58
SNRPA1-201ENST00000254193 NUDT18Q6ZVK8 323 aa18.66■□□□□ 0.58
SNRPA1-201ENST00000254193 IRF2BP2Q7Z5L9 587 aa18.66■□□□□ 0.58
SNRPA1-201ENST00000254193 PHLDB2Q86SQ0 1253 aa18.66■□□□□ 0.58
SNRPA1-201ENST00000254193 TXNDC5Q8NBS9 432 aaKnown RBP18.66■□□□□ 0.58
SNRPA1-201ENST00000254193 AGPAT1Q99943 283 aa18.66■□□□□ 0.58
SNRPA1-201ENST00000254193 SEPT11Q9NVA2 429 aaKnown RBP18.66■□□□□ 0.58
SNRPA1-201ENST00000254193 LRRC53A6NM62 1247 aa18.65■□□□□ 0.58
SNRPA1-201ENST00000254193 SGK1O00141 431 aa18.65■□□□□ 0.58
SNRPA1-201ENST00000254193 APOEP02649 317 aa18.65■□□□□ 0.58
SNRPA1-201ENST00000254193 MMP8P22894 467 aa18.65■□□□□ 0.58
SNRPA1-201ENST00000254193 HOXA6P31267 233 aa18.65■□□□□ 0.58
SNRPA1-201ENST00000254193 GBP1P32455 592 aa18.65■□□□□ 0.58
SNRPA1-201ENST00000254193 NOS2P35228 1153 aa18.65■□□□□ 0.58
SNRPA1-201ENST00000254193 NME3Q13232 169 aa18.65■□□□□ 0.58
SNRPA1-201ENST00000254193 CLEC16AQ2KHT3 1053 aa18.65■□□□□ 0.58
SNRPA1-201ENST00000254193 PIK3R6Q5UE93 754 aa18.65■□□□□ 0.58
SNRPA1-201ENST00000254193 ASCL5Q7RTU5 278 aa18.65■□□□□ 0.58
SNRPA1-201ENST00000254193 LONP2Q86WA8 852 aa18.65■□□□□ 0.58
SNRPA1-201ENST00000254193 MYEOVQ96EZ4 313 aa18.65■□□□□ 0.58
SNRPA1-201ENST00000254193 C11orf70Q9BRQ4 267 aa18.65■□□□□ 0.58
SNRPA1-201ENST00000254193 NUCKS1Q9H1E3 243 aaKnown RBP18.65■□□□□ 0.58
SNRPA1-201ENST00000254193 TSPY26PQ9H489 355 aa18.65■□□□□ 0.58
SNRPA1-201ENST00000254193 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.65■□□□□ 0.58
SNRPA1-201ENST00000254193 MMP17Q9ULZ9 603 aa18.65■□□□□ 0.58
SNRPA1-201ENST00000254193 MYO6Q9UM54 1294 aa18.65■□□□□ 0.58
SNRPA1-201ENST00000254193 SLC27A6Q9Y2P4 619 aa18.65■□□□□ 0.58
SNRPA1-201ENST00000254193 PRR23AA6NEV1 266 aa18.64■□□□□ 0.57
SNRPA1-201ENST00000254193 M0QYT0 321 aa18.64■□□□□ 0.57
SNRPA1-201ENST00000254193 GFRA3O60609 400 aa18.64■□□□□ 0.57
SNRPA1-201ENST00000254193 LILRB5O75023 590 aa18.64■□□□□ 0.57
SNRPA1-201ENST00000254193 ADAM23O75077 832 aa18.64■□□□□ 0.57
SNRPA1-201ENST00000254193 CCDC172P0C7W6 258 aa18.64■□□□□ 0.57
SNRPA1-201ENST00000254193 UNGP13051 313 aaPredicted RBP18.64■□□□□ 0.57
SNRPA1-201ENST00000254193 HNRNPLP14866 589 aaKnown RBP eCLIP18.64■□□□□ 0.57
SNRPA1-201ENST00000254193 TFE3P19532 575 aaPredicted RBP18.64■□□□□ 0.57
SNRPA1-201ENST00000254193 SCNN1AP37088 669 aa18.64■□□□□ 0.57
SNRPA1-201ENST00000254193 MATKP42679 507 aa18.64■□□□□ 0.57
SNRPA1-201ENST00000254193 ZNF445P59923 1031 aa18.64■□□□□ 0.57
SNRPA1-201ENST00000254193 SRSF5Q13243 272 aaKnown RBP18.64■□□□□ 0.57
SNRPA1-201ENST00000254193 GEN1Q17RS7 908 aa18.64■□□□□ 0.57
SNRPA1-201ENST00000254193 OTUD1Q5VV17 481 aaPredicted RBP18.64■□□□□ 0.57
SNRPA1-201ENST00000254193 EGFLAMQ63HQ2 1017 aa18.64■□□□□ 0.57
SNRPA1-201ENST00000254193 CAMKK1Q8N5S9 505 aa18.64■□□□□ 0.57
SNRPA1-201ENST00000254193 ZNF513Q8N8E2 541 aaPredicted RBP18.64■□□□□ 0.57
SNRPA1-201ENST00000254193 RNF34Q969K3 372 aa18.64■□□□□ 0.57
SNRPA1-201ENST00000254193 ACOX2Q99424 681 aa18.64■□□□□ 0.57
SNRPA1-201ENST00000254193 DDX50Q9BQ39 737 aaKnown RBP18.64■□□□□ 0.57
SNRPA1-201ENST00000254193 SLC2A11Q9BYW1 496 aa18.64■□□□□ 0.57
SNRPA1-201ENST00000254193 ADAM33Q9BZ11 813 aa18.64■□□□□ 0.57
SNRPA1-201ENST00000254193 TTYH3Q9C0H2 523 aa18.64■□□□□ 0.57
SNRPA1-201ENST00000254193 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.64■□□□□ 0.57
SNRPA1-201ENST00000254193 IFNKQ9P0W0 207 aa18.64■□□□□ 0.57
SNRPA1-201ENST00000254193 CALCOCO1Q9P1Z2 691 aa18.64■□□□□ 0.57
SNRPA1-201ENST00000254193 STIM2Q9P246 746 aa18.64■□□□□ 0.57
SNRPA1-201ENST00000254193 TMEM59LQ9UK28 342 aa18.64■□□□□ 0.57
SNRPA1-201ENST00000254193 STARD13Q9Y3M8 1113 aa18.64■□□□□ 0.57
SNRPA1-201ENST00000254193 KCNU1A8MYU2 1149 aa18.63■□□□□ 0.57
SNRPA1-201ENST00000254193 HRO43593 1189 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms