RNA–Protein interactions for RNA: ENST00000636881.1

CHD2-226, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 3,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-226ENST00000636881 TBCCD1Q9NVR7 557 aa8.78□□□□□ -1
CHD2-226ENST00000636881 STK39Q9UEW8 545 aa8.78□□□□□ -1
CHD2-226ENST00000636881 SIPA1L1O43166 1804 aa8.78□□□□□ -1
CHD2-226ENST00000636881 STRCQ7RTU9 1775 aa8.78□□□□□ -1
CHD2-226ENST00000636881 BOLA2-SMG1P6H3BVE0 249 aa8.78□□□□□ -1
CHD2-226ENST00000636881 ZNF189O75820 626 aaPredicted RBP8.78□□□□□ -1
CHD2-226ENST00000636881 FBXO21O94952 628 aa8.78□□□□□ -1
CHD2-226ENST00000636881 C1QAP02745 245 aa8.78□□□□□ -1
CHD2-226ENST00000636881 SERPINB2P05120 415 aa8.78□□□□□ -1
CHD2-226ENST00000636881 EIF2AK2P19525 551 aaKnown RBP8.78□□□□□ -1
CHD2-226ENST00000636881 PRDX6P30041 224 aa8.78□□□□□ -1
CHD2-226ENST00000636881 TFDP2Q14188 446 aa8.78□□□□□ -1
CHD2-226ENST00000636881 C16orf72Q14CZ0 275 aa8.78□□□□□ -1
CHD2-226ENST00000636881 C1QTNF12Q5T7M4 302 aa8.78□□□□□ -1
CHD2-226ENST00000636881 NIPA1Q7RTP0 329 aa8.78□□□□□ -1
CHD2-226ENST00000636881 MAVSQ7Z434 540 aa8.78□□□□□ -1
CHD2-226ENST00000636881 SMYD1Q8NB12 490 aa8.78□□□□□ -1
CHD2-226ENST00000636881 CGRRF1Q99675 332 aa8.78□□□□□ -1
CHD2-226ENST00000636881 RRN3Q9NYV6 651 aa8.78□□□□□ -1
CHD2-226ENST00000636881 ZNF232Q9UNY5 417 aa8.78□□□□□ -1
CHD2-226ENST00000636881 CNTN6Q9UQ52 1028 aa8.78□□□□□ -1
CHD2-226ENST00000636881 H0YCG3 227 aa8.77□□□□□ -1
CHD2-226ENST00000636881 GRK2P25098 689 aa8.77□□□□□ -1
CHD2-226ENST00000636881 MIPP30301 263 aa8.77□□□□□ -1
CHD2-226ENST00000636881 SERPINB5P36952 375 aa8.77□□□□□ -1
CHD2-226ENST00000636881 SCARA5Q6ZMJ2 495 aa8.77□□□□□ -1
CHD2-226ENST00000636881 BNC2Q6ZN30 1099 aaPredicted RBP8.77□□□□□ -1
CHD2-226ENST00000636881 C10orf107Q8IVU9 208 aa8.77□□□□□ -1
CHD2-226ENST00000636881 UBR7Q8N806 425 aa8.77□□□□□ -1
CHD2-226ENST00000636881 OR5B17Q8NGF7 314 aa8.77□□□□□ -1
CHD2-226ENST00000636881 CDRT15Q96T59 188 aa8.77□□□□□ -1
CHD2-226ENST00000636881 NTPCRQ9BSD7 190 aaKnown RBP8.77□□□□□ -1
CHD2-226ENST00000636881 MSTO1Q9BUK6 570 aa8.77□□□□□ -1
CHD2-226ENST00000636881 IDI2Q9BXS1 227 aa8.77□□□□□ -1
CHD2-226ENST00000636881 MAN1C1Q9NR34 630 aa8.77□□□□□ -1
CHD2-226ENST00000636881 COL20A1Q9P218 1284 aa8.77□□□□□ -1
CHD2-226ENST00000636881 PADI4Q9UM07 663 aa8.77□□□□□ -1
CHD2-226ENST00000636881 PRPF19Q9UMS4 504 aaKnown RBP8.77□□□□□ -1
CHD2-226ENST00000636881 HEY1Q9Y5J3 304 aa8.77□□□□□ -1
CHD2-226ENST00000636881 UBIAD1Q9Y5Z9 338 aa8.77□□□□□ -1
CHD2-226ENST00000636881 ZNF541Q9H0D2 1346 aa8.77□□□□□ -1
CHD2-226ENST00000636881 SLC15A5A6NIM6 579 aa8.77□□□□□ -1.01
CHD2-226ENST00000636881 PLIN3O60664 434 aa8.77□□□□□ -1.01
CHD2-226ENST00000636881 HSPA4LO95757 839 aa8.77□□□□□ -1.01
CHD2-226ENST00000636881 RALBP11234 206 aa8.77□□□□□ -1.01
CHD2-226ENST00000636881 SFNP31947 248 aa8.77□□□□□ -1.01
CHD2-226ENST00000636881 MSX2P35548 267 aaPredicted RBP8.77□□□□□ -1.01
CHD2-226ENST00000636881 CD97P48960 835 aa8.77□□□□□ -1.01
CHD2-226ENST00000636881 ABCE1P61221 599 aaKnown RBP8.77□□□□□ -1.01
CHD2-226ENST00000636881 CLDN10P78369 228 aa8.77□□□□□ -1.01
CHD2-226ENST00000636881 CDKL1Q00532 357 aa8.77□□□□□ -1.01
CHD2-226ENST00000636881 MPP3Q13368 585 aa8.77□□□□□ -1.01
CHD2-226ENST00000636881 KRT80Q6KB66 452 aa8.77□□□□□ -1.01
CHD2-226ENST00000636881 CASC4Q6P4E1 433 aa8.77□□□□□ -1.01
CHD2-226ENST00000636881 POTEHQ6S545 545 aa8.77□□□□□ -1.01
CHD2-226ENST00000636881 BBS5Q8N3I7 341 aa8.77□□□□□ -1.01
CHD2-226ENST00000636881 ARFGAP1Q8N6T3 406 aa8.77□□□□□ -1.01
CHD2-226ENST00000636881 MCPH1Q8NEM0 835 aa8.77□□□□□ -1.01
CHD2-226ENST00000636881 BHLHE22Q8NFJ8 381 aaPredicted RBP8.77□□□□□ -1.01
CHD2-226ENST00000636881 POLR3FQ9H1D9 316 aaPredicted RBP8.77□□□□□ -1.01
CHD2-226ENST00000636881 CAAP1Q9H8G2 361 aa8.77□□□□□ -1.01
CHD2-226ENST00000636881 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.77□□□□□ -1.01
CHD2-226ENST00000636881 FBXO28Q9NVF7 368 aa8.77□□□□□ -1.01
CHD2-226ENST00000636881 SEPT9Q9UHD8 586 aaPredicted RBP8.77□□□□□ -1.01
CHD2-226ENST00000636881 HEMK1Q9Y5R4 338 aaPredicted RBP8.77□□□□□ -1.01
CHD2-226ENST00000636881 CNTNAP2Q9UHC6 1331 aa8.77□□□□□ -1.01
CHD2-226ENST00000636881 TESPA1A2RU30 521 aaPredicted RBP8.77□□□□□ -1.01
CHD2-226ENST00000636881 FAM159BA6NKW6 160 aa8.77□□□□□ -1.01
CHD2-226ENST00000636881 TPP1O14773 563 aa8.77□□□□□ -1.01
CHD2-226ENST00000636881 MAP3K6O95382 1288 aa8.77□□□□□ -1.01
CHD2-226ENST00000636881 THRAP10827 490 aa8.77□□□□□ -1.01
CHD2-226ENST00000636881 ENO3P13929 434 aaPredicted RBP8.77□□□□□ -1.01
CHD2-226ENST00000636881 EIF4BP23588 611 aaKnown RBP8.77□□□□□ -1.01
CHD2-226ENST00000636881 CNTFP26441 200 aa8.77□□□□□ -1.01
CHD2-226ENST00000636881 MLH1P40692 756 aa8.77□□□□□ -1.01
CHD2-226ENST00000636881 CDK9P50750 372 aaKnown RBP8.77□□□□□ -1.01
CHD2-226ENST00000636881 KRT76Q01546 638 aa8.77□□□□□ -1.01
CHD2-226ENST00000636881 PLOD1Q02809 727 aaPredicted RBP8.77□□□□□ -1.01
CHD2-226ENST00000636881 PTPN20Q4JDL3 420 aa8.77□□□□□ -1.01
CHD2-226ENST00000636881 GRAMD4Q6IC98 578 aa8.77□□□□□ -1.01
CHD2-226ENST00000636881 FAM160B2Q86V87 743 aa8.77□□□□□ -1.01
CHD2-226ENST00000636881 CAND1Q86VP6 1230 aaKnown RBP8.77□□□□□ -1.01
CHD2-226ENST00000636881 SP8Q8IXZ3 490 aa8.77□□□□□ -1.01
CHD2-226ENST00000636881 RNF148Q8N7C7 305 aa8.77□□□□□ -1.01
CHD2-226ENST00000636881 EME1Q96AY2 570 aa8.77□□□□□ -1.01
CHD2-226ENST00000636881 LRRC39Q96DD0 335 aa8.77□□□□□ -1.01
CHD2-226ENST00000636881 ZBTB45Q96K62 511 aaPredicted RBP8.77□□□□□ -1.01
CHD2-226ENST00000636881 PKP2Q99959 881 aa8.77□□□□□ -1.01
CHD2-226ENST00000636881 PCDH18Q9HCL0 1135 aa8.77□□□□□ -1.01
CHD2-226ENST00000636881 GABBR1Q9UBS5 961 aa8.77□□□□□ -1.01
CHD2-226ENST00000636881 TJP2Q9UDY2 1190 aa8.77□□□□□ -1.01
CHD2-226ENST00000636881 RIMS3Q9UJD0 308 aa8.77□□□□□ -1.01
CHD2-226ENST00000636881 USP18Q9UMW8 372 aa8.77□□□□□ -1.01
CHD2-226ENST00000636881 WDR37Q9Y2I8 494 aa8.77□□□□□ -1.01
CHD2-226ENST00000636881 NFIBO00712 420 aa8.76□□□□□ -1.01
CHD2-226ENST00000636881 DGKIO75912 1065 aa8.76□□□□□ -1.01
CHD2-226ENST00000636881 LDHAP00338 332 aaKnown RBP8.76□□□□□ -1.01
CHD2-226ENST00000636881 CPA3P15088 417 aa8.76□□□□□ -1.01
CHD2-226ENST00000636881 ZFXP17010 805 aaPredicted RBP8.76□□□□□ -1.01
CHD2-226ENST00000636881 XRCC1P18887 633 aaPredicted RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms