RNA–Protein interactions for RNA: ENST00000617445.4

CCDC28A-203, Transcript of coiled-coil domain containing 28A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC28A, Length 1,240 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28A-203ENST00000617445 CNTN6Q9UQ52 1028 aa19.94■□□□□ 0.78
CCDC28A-203ENST00000617445 PI4KAP42356 2102 aa19.94■□□□□ 0.78
CCDC28A-203ENST00000617445 TPRP12270 2363 aaKnown RBP19.93■□□□□ 0.78
CCDC28A-203ENST00000617445 A0A1W2PQF6 199 aa19.93■□□□□ 0.78
CCDC28A-203ENST00000617445 YJEFN3A6XGL0 299 aa19.93■□□□□ 0.78
CCDC28A-203ENST00000617445 E7ENQ6 273 aa19.93■□□□□ 0.78
CCDC28A-203ENST00000617445 RNF225M0QZC1 329 aaPredicted RBP19.93■□□□□ 0.78
CCDC28A-203ENST00000617445 ZNF217O75362 1048 aa19.93■□□□□ 0.78
CCDC28A-203ENST00000617445 FBXO21O94952 628 aa19.93■□□□□ 0.78
CCDC28A-203ENST00000617445 BCKDHBP21953 392 aa19.93■□□□□ 0.78
CCDC28A-203ENST00000617445 DAOAP59103 153 aa19.93■□□□□ 0.78
CCDC28A-203ENST00000617445 MAP7D1Q3KQU3 841 aa19.93■□□□□ 0.78
CCDC28A-203ENST00000617445 STPG1Q5TH74 334 aa19.93■□□□□ 0.78
CCDC28A-203ENST00000617445 RRAGAQ7L523 313 aa19.93■□□□□ 0.78
CCDC28A-203ENST00000617445 CYP2U1Q7Z449 544 aa19.93■□□□□ 0.78
CCDC28A-203ENST00000617445 NDRG1Q92597 394 aaKnown RBP19.93■□□□□ 0.78
CCDC28A-203ENST00000617445 GOLGA1Q92805 767 aa19.93■□□□□ 0.78
CCDC28A-203ENST00000617445 BHMTQ93088 406 aa19.93■□□□□ 0.78
CCDC28A-203ENST00000617445 IRX2Q9BZI1 471 aaPredicted RBP19.93■□□□□ 0.78
CCDC28A-203ENST00000617445 STOML2Q9UJZ1 356 aa19.93■□□□□ 0.78
CCDC28A-203ENST00000617445 M0QYV0 167 aa19.92■□□□□ 0.78
CCDC28A-203ENST00000617445 KHNYNO15037 678 aaKnown RBP19.92■□□□□ 0.78
CCDC28A-203ENST00000617445 TIMM44O43615 452 aa19.92■□□□□ 0.78
CCDC28A-203ENST00000617445 LCP1P13796 627 aa19.92■□□□□ 0.78
CCDC28A-203ENST00000617445 GABRG2P18507 467 aa19.92■□□□□ 0.78
CCDC28A-203ENST00000617445 DHPSP49366 369 aaPredicted RBP19.92■□□□□ 0.78
CCDC28A-203ENST00000617445 MFAP3P55082 362 aa19.92■□□□□ 0.78
CCDC28A-203ENST00000617445 EIF4HQ15056 248 aaKnown RBP19.92■□□□□ 0.78
CCDC28A-203ENST00000617445 MEA1Q16626 185 aa19.92■□□□□ 0.78
CCDC28A-203ENST00000617445 MPPE1Q53F39 396 aa19.92■□□□□ 0.78
CCDC28A-203ENST00000617445 PMF1Q6P1K2 205 aa19.92■□□□□ 0.78
CCDC28A-203ENST00000617445 MSANTD2Q6P1R3 559 aa19.92■□□□□ 0.78
CCDC28A-203ENST00000617445 IPO4Q8TEX9 1081 aaKnown RBP19.92■□□□□ 0.78
CCDC28A-203ENST00000617445 DDI1Q8WTU0 396 aa19.92■□□□□ 0.78
CCDC28A-203ENST00000617445 RLN3Q8WXF3 142 aa19.92■□□□□ 0.78
CCDC28A-203ENST00000617445 KAT5Q92993 513 aa19.92■□□□□ 0.78
CCDC28A-203ENST00000617445 INTS2Q9H0H0 1204 aaKnown RBP19.92■□□□□ 0.78
CCDC28A-203ENST00000617445 SART1O43290 800 aaKnown RBP19.91■□□□□ 0.78
CCDC28A-203ENST00000617445 AP5Z1O43299 807 aa19.91■□□□□ 0.78
CCDC28A-203ENST00000617445 BRD2P25440 801 aaKnown RBP19.91■□□□□ 0.78
CCDC28A-203ENST00000617445 ADGRF1Q5T601 910 aa19.91■□□□□ 0.78
CCDC28A-203ENST00000617445 RNF43Q68DV7 783 aa19.91■□□□□ 0.78
CCDC28A-203ENST00000617445 ANKS1BQ7Z6G8 1248 aa19.91■□□□□ 0.78
CCDC28A-203ENST00000617445 ARHGEF19Q8IW93 802 aa19.91■□□□□ 0.78
CCDC28A-203ENST00000617445 UNC45BQ8IWX7 931 aa19.91■□□□□ 0.78
CCDC28A-203ENST00000617445 EDEM1Q92611 657 aa19.91■□□□□ 0.78
CCDC28A-203ENST00000617445 PIWIL1Q96J94 861 aaKnown RBP19.91■□□□□ 0.78
CCDC28A-203ENST00000617445 ACOX2Q99424 681 aa19.91■□□□□ 0.78
CCDC28A-203ENST00000617445 ZSWIM1Q9BR11 485 aa19.91■□□□□ 0.78
CCDC28A-203ENST00000617445 CD248Q9HCU0 757 aa19.91■□□□□ 0.78
CCDC28A-203ENST00000617445 CEP192Q8TEP8 1941 aa19.9■□□□□ 0.78
CCDC28A-203ENST00000617445 TM4SF5O14894 197 aa19.9■□□□□ 0.78
CCDC28A-203ENST00000617445 MED7O43513 233 aa19.9■□□□□ 0.78
CCDC28A-203ENST00000617445 HOXD12P35452 270 aa19.9■□□□□ 0.78
CCDC28A-203ENST00000617445 WASP42768 502 aa19.9■□□□□ 0.78
CCDC28A-203ENST00000617445 ACADSBP45954 432 aa19.9■□□□□ 0.78
CCDC28A-203ENST00000617445 RGS7P49802 495 aa19.9■□□□□ 0.78
CCDC28A-203ENST00000617445 STARD3Q14849 445 aa19.9■□□□□ 0.78
CCDC28A-203ENST00000617445 PPM1JQ5JR12 505 aa19.9■□□□□ 0.78
CCDC28A-203ENST00000617445 SYT12Q8IV01 421 aa19.9■□□□□ 0.78
CCDC28A-203ENST00000617445 MLKLQ8NB16 471 aa19.9■□□□□ 0.78
CCDC28A-203ENST00000617445 STK32AQ8WU08 396 aa19.9■□□□□ 0.78
CCDC28A-203ENST00000617445 KREMEN1Q96MU8 473 aa19.9■□□□□ 0.78
CCDC28A-203ENST00000617445 SMOC1Q9H4F8 434 aa19.9■□□□□ 0.78
CCDC28A-203ENST00000617445 UBE2TQ9NPD8 197 aaPredicted RBP19.9■□□□□ 0.78
CCDC28A-203ENST00000617445 RXFP3Q9NSD7 469 aa19.9■□□□□ 0.78
CCDC28A-203ENST00000617445 CALCOCO1Q9P1Z2 691 aa19.9■□□□□ 0.78
CCDC28A-203ENST00000617445 THAP10Q9P2Z0 257 aaPredicted RBP19.9■□□□□ 0.78
CCDC28A-203ENST00000617445 SFMBT1Q9UHJ3 866 aa19.9■□□□□ 0.78
CCDC28A-203ENST00000617445 EVLQ9UI08 416 aaPredicted RBP19.9■□□□□ 0.78
CCDC28A-203ENST00000617445 MBD1Q9UIS9 605 aaPredicted RBP19.9■□□□□ 0.78
CCDC28A-203ENST00000617445 LTFP02788 710 aa19.89■□□□□ 0.77
CCDC28A-203ENST00000617445 RPL34P49207 117 aaKnown RBP19.89■□□□□ 0.77
CCDC28A-203ENST00000617445 RING1Q06587 406 aa19.89■□□□□ 0.77
CCDC28A-203ENST00000617445 ENPP2Q13822 863 aa19.89■□□□□ 0.77
CCDC28A-203ENST00000617445 CAMK4Q16566 473 aa19.89■□□□□ 0.77
CCDC28A-203ENST00000617445 NUGGCQ68CJ6 796 aa19.89■□□□□ 0.77
CCDC28A-203ENST00000617445 METTL3Q86U44 580 aaKnown RBP19.89■□□□□ 0.77
CCDC28A-203ENST00000617445 PIGKQ92643 395 aa19.89■□□□□ 0.77
CCDC28A-203ENST00000617445 AZIN2Q96A70 460 aa19.89■□□□□ 0.77
CCDC28A-203ENST00000617445 TMA16Q96EY4 203 aaKnown RBP19.89■□□□□ 0.77
CCDC28A-203ENST00000617445 P2RY11Q96G91 374 aa19.89■□□□□ 0.77
CCDC28A-203ENST00000617445 EDEM2Q9BV94 578 aa19.89■□□□□ 0.77
CCDC28A-203ENST00000617445 TRIM62Q9BVG3 475 aa19.89■□□□□ 0.77
CCDC28A-203ENST00000617445 ELOVL2Q9NXB9 296 aa19.89■□□□□ 0.77
CCDC28A-203ENST00000617445 CACNA2D2Q9NY47 1150 aa19.89■□□□□ 0.77
CCDC28A-203ENST00000617445 STON1Q9Y6Q2 735 aa19.89■□□□□ 0.77
CCDC28A-203ENST00000617445 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.88■□□□□ 0.77
CCDC28A-203ENST00000617445 GTPBP10A4D1E9 387 aaKnown RBP19.88■□□□□ 0.77
CCDC28A-203ENST00000617445 IRAK2O43187 625 aa19.88■□□□□ 0.77
CCDC28A-203ENST00000617445 GABBR2O75899 941 aa19.88■□□□□ 0.77
CCDC28A-203ENST00000617445 ADRB1P08588 477 aa19.88■□□□□ 0.77
CCDC28A-203ENST00000617445 KRT5P13647 590 aa19.88■□□□□ 0.77
CCDC28A-203ENST00000617445 PRKCSHP14314 528 aaPredicted RBP19.88■□□□□ 0.77
CCDC28A-203ENST00000617445 NDUFV2P19404 249 aa19.88■□□□□ 0.77
CCDC28A-203ENST00000617445 GPD2P43304 727 aa19.88■□□□□ 0.77
CCDC28A-203ENST00000617445 SLC11A2P49281 568 aa19.88■□□□□ 0.77
CCDC28A-203ENST00000617445 LMAN2Q12907 356 aa19.88■□□□□ 0.77
CCDC28A-203ENST00000617445 GEN1Q17RS7 908 aa19.88■□□□□ 0.77
CCDC28A-203ENST00000617445 MPP7Q5T2T1 576 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms